FastQCFastQC Report
Thu 4 May 2017
HCGCLBCXY_s2_2_illumina12index_13_SL248360.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGCLBCXY_s2_2_illumina12index_13_SL248360.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 11990921
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 61358 0.5117038132433697 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 52471 0.43758940618489606 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 49669 0.41422172658797435 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 49299 0.41113605868973696 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 48392 0.4035720025175714 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 48294 0.4027547175066869 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 46155 0.3849162211976878 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 44643 0.3723066810297557 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 41645 0.3473044314110651 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 39424 0.32878208437867285 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 39134 0.3263635879178922 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38680 0.3225773900103253 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 36622 0.30541440478175114 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 34490 0.28763428597352947 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 33018 0.27535833152432576 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 32616 0.2720057950511058 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 32273 0.26914529751301003 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 32171 0.26829465393025276 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 32089 0.2676108032068596 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31255 0.2606555409713733 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31084 0.2592294620238095 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 30755 0.2564857194872687 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 29886 0.2492385697478951 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28504 0.23771318316583023 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28225 0.2353864227776999 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 26620 0.2220012958137244 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 26583 0.22169272902390064 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26380 0.21999978150135424 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26233 0.2187738539850275 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25478 0.21247742354402968 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25347 0.21138493031519429 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24983 0.2083493002747662 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 24932 0.20792397848338756 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 24545 0.20469653665469065 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24411 0.20357902449695064 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24176 0.20161920839942152 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24135 0.20127728303772496 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23125 0.19285424363983383 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23123 0.19283756435389743 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22799 0.1901355200321977 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22103 0.18433112852632422 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 22093 0.1842477320966421 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21179 0.17662529842369906 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21089 0.17587473055656025 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 20923 0.17449034982383757 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19526 0.16283986859724953 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19296 0.16092175071456147 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18617 0.15525913313914752 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 18335 0.15290735382211257 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18161 0.1514562559456442 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 17836 0.14874587198097627 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17656 0.14724473624669865 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17476 0.14574360051242102 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17410 0.14519318407651924 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 17158 0.14309159404853056 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16825 0.14031449294011694 No Hit
GGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 16085 0.13414315714364225 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 16085 0.13414315714364225 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15922 0.1327837953398242 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15879 0.1324251906921912 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 15834 0.1320499067586218 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15759 0.1314244335360061 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 15212 0.12686264883239579 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14866 0.12397713236539545 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14796 0.12339335735762082 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 14464 0.12062459589217542 No Hit
TCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14440 0.12042444446093839 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 14414 0.12020761374376496 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14243 0.11878153479620124 No Hit
GCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14052 0.1171886629892733 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 13679 0.11407797616213133 No Hit
TACGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAC 13635 0.11371103187153013 No Hit
TTCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13446 0.11213483935053864 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 13384 0.11161778148650967 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13186 0.10996653217880427 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 12814 0.10686418499463052 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 12591 0.10500444461271989 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12582 0.10492938782600604 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 12457 0.10388693245497989 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12300 0.10257760850897109 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12051 0.10050103740988703 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12022 0.10025918776380897 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TATTA 12829975 7.6341486 146.35995 240-247
CTGGA 24248805 7.611737 74.19111 35-39
TGGAT 18451280 7.1136637 87.573586 35-39
TCACC 18931220 6.6785316 78.910355 160-169
TGTAT 13284210 6.6685348 80.36375 240-247
TCTCC 17010790 6.591961 100.62765 20-24
CTGAG 20407975 6.4060946 54.185963 15-19
CTGTG 18562700 6.4006248 94.231476 25-29
TTACT 10804675 5.7499075 127.41071 240-247
ATTAC 11611450 5.6253276 119.655334 240-247
AGTGG 18866205 5.58629 39.10858 100-109
TCCCT 14267740 5.5289836 77.61143 10-14
TTCAC 12727360 5.514601 90.11669 40-44
TGGGT 16513330 5.371077 46.56845 100-109
CCTGA 15789935 5.254462 56.406197 15-19
ATTCA 10541080 5.1067724 126.09957 40-44
AGCCT 15135960 5.036836 59.46983 30-34
CTCCA 13829050 4.878594 48.04027 80-89
CAGCC 17780760 4.817534 66.67649 30-34
TGAGA 13700315 4.808499 97.459755 15-19
ACACG 15631080 4.735317 53.91254 230-239
CTCTG 12682140 4.6358376 76.17125 35-39
GACAC 14976995 4.537167 53.888966 230-239
GTATT 8993330 4.514558 87.33673 240-247
TACTG 10894980 4.452949 88.44627 240-247
CCAGG 17337965 4.431167 55.116024 80-89
TCTGG 12841665 4.4279485 140.2746 35-39
TCCAG 13281220 4.419629 45.90953 80-89
AAGGG 16150565 4.353503 38.8893 90-99
ACCAT 10939235 4.314942 68.645226 160-169
GATTC 10494680 4.28934 66.006 40-44
TGGAG 14247875 4.218801 37.27791 90-99
TCAGT 10078825 4.119374 107.359856 7
CACCT 11546160 4.0732393 56.502193 40-44
TACTA 8401160 4.070059 36.719666 130-139
CCCTG 13663895 4.0666504 84.76289 10-14
GAAGG 15063460 4.0604663 33.754395 150-159
CTGGG 15203370 4.02618 141.79459 3
CACCA 12446565 3.9972754 59.310253 160-169
TGAAG 11301575 3.9665961 43.657295 150-159
GACTC 11881065 3.9536955 56.8813 20-24
AGACT 10434135 3.8823078 72.668205 15-19
GGACA 13552885 3.8729098 30.488817 220-229
GGGTC 14533425 3.848764 125.38503 8
ACTAC 9701980 3.8269112 34.17866 130-139
TATCT 7173840 3.8176913 62.237392 200-209
GAGAC 13337725 3.8114252 57.486298 8
TCCTG 10336390 3.7783704 74.29681 20-24
GCTGG 14199020 3.7602065 39.622013 90-99
ACTGT 9133230 3.7328944 73.62483 240-247
CTCCT 9546660 3.6994874 109.25591 20-24
AGCTG 11420705 3.5849764 35.256897 60-69
ACTCT 8259365 3.5786767 75.48436 20-24
GGTCC 12596870 3.5364738 154.13512 9
CAAGA 10293360 3.4866061 43.29733 180-189
CCTGT 9402935 3.437155 70.03312 25-29
CATCT 7898495 3.4223163 40.40341 170-179
GAGTG 11230020 3.325213 40.020096 90-99
CTGCA 9987080 3.3234289 41.34731 200-209
CCATC 9373050 3.306613 30.389755 170-179
ACCTT 7615855 3.2998521 91.11045 40-44
AGTAG 9355340 3.2835119 32.8645 50-59
ACTGG 10449635 3.2801566 43.08191 60-69
GGCTG 12382075 3.2790403 40.24195 90-99
CTATG 8013195 3.2751184 36.028637 50-59
ATCTG 7969460 3.2572434 45.489532 200-209
GGATT 8148435 3.1415284 61.37621 40-44
AGACA 9224415 3.1245286 33.99863 170-179
GACAA 9168650 3.1056397 28.057144 180-189
GTGTA 8005630 3.086472 41.741093 230-239
ATCTC 7093410 3.0734832 58.110207 170-179
GTCCC 10176185 3.0286372 84.47104 10-14
TGTGC 8730305 3.010306 64.96044 25-29
GTGAA 8553530 3.0020952 44.188595 10-14
GAACA 8815850 2.9861379 40.729584 210-219
GAGCT 9512240 2.9859066 24.51169 60-69
ATGAA 7115995 2.9604297 32.488075 210-219
GGAGT 9799800 2.901724 34.638992 90-99
TGCAA 7770575 2.8912568 41.252316 200-209
GCTAT 7037875 2.8764899 50.365387 50-59
CTTCA 6616065 2.8666558 67.007416 45-49
AAGAA 7555135 2.8613672 35.821896 190-199
GTCTC 7798265 2.8505826 33.550682 15-19
CGCCA 10447315 2.830604 46.621918 70-79
AGGCT 8972615 2.8165176 25.959917 25-29
ACAGC 9270550 2.808443 32.670753 210-219
GCTGT 8047150 2.7747467 25.554861 230-239
TATGC 6779015 2.7706895 26.830791 50-59
AGGGC 11350205 2.7363346 36.846607 150-159
CCTCA 7702215 2.7171776 93.18406 5
CCTTC 6975480 2.7031133 78.294304 45-49
CAAAT 6098600 2.6896996 39.628143 200-209
CAGGC 10461305 2.6736581 38.958748 70-79
GCCTG 9469690 2.6585422 39.044567 210-219
GGAAG 9719425 2.6199422 24.549335 80-89
CACGG 10228770 2.6142278 49.76732 230-239
GTATC 6349320 2.5950665 29.5965 200-209
ACGGC 10142245 2.5921142 52.198215 230-239
GCCTC 8649510 2.574268 85.73871 4
GCAGC 10049195 2.5683324 40.045467 30-34
TGAAC 6899480 2.5671418 44.608917 210-219
CCAAG 8447370 2.5590668 38.772633 180-189
AATGA 6145700 2.556763 31.822119 210-219
AGAAC 7495825 2.539014 34.526573 190-199
CAGGG 10505315 2.5326467 32.082134 80-89
TATCA 5219200 2.5285137 17.659208 170-179
AAATG 6030845 2.5089803 36.714153 200-209
GGGCT 9440765 2.500118 49.023426 90-99
TATAT 4157665 2.473912 27.285917 110-119
CTCTC 6362230 2.4654686 110.72209 20-24
CTACA 6186690 2.4403176 24.008326 190-199
ATCAG 6543085 2.4345353 21.211569 45-49
AGGGA 8999665 2.4259257 34.59268 80-89
GTAGT 6258940 2.4130569 32.981068 120-129
CACTG 7237490 2.4084404 24.374548 60-69
CCGCC 9877320 2.39347 39.23555 70-79
CAGTG 7619815 2.3918717 82.42848 8
GCTCC 7936650 2.3621066 40.30397 80-89
TACAT 4866470 2.3576288 22.162231 190-199
CTGTA 5763605 2.3556757 31.847559 190-199
TCCAA 5957300 2.3498354 43.611168 180-189
GGCCG 10885460 2.3470738 25.161457 230-239
AGCTA 6304310 2.3456922 38.634495 50-59
TTCAG 5719845 2.3377903 63.26793 45-49
GTGGA 7826470 2.3174205 22.728224 100-109
GGGAA 8550560 2.3048663 29.194843 80-89
ATGGA 6529740 2.2917902 17.885351 120-129
TTCCA 5252675 2.2759163 30.170631 180-189
TGCAG 7227475 2.2687154 48.970055 30-34
GAGTC 7213340 2.2642782 26.473711 160-169
CCTCT 5841620 2.263724 59.129375 35-39
TCAGC 6781385 2.256661 14.991048 45-49
CAGTA 6035440 2.245652 25.934357 45-49
TAGTA 4875310 2.227969 23.592915 120-129
ATACT 4591520 2.2244256 35.42261 130-139
CCGTG 7873885 2.2105324 21.810858 230-239
GTGGT 6788040 2.207858 29.419262 120-129
GATGG 7418775 2.1967018 24.653028 100-109
TCCGC 7374530 2.1948082 48.211372 70-79
CATAT 4512610 2.1861966 14.429375 170-179
AACAG 6437865 2.180658 39.346043 210-219
CAGAG 7581485 2.1665063 35.833965 170-179
GCAGA 7514005 2.1472228 27.43661 140-149
GTGGG 8526565 2.1299672 32.969578 100-109
TGGTA 5503565 2.1218317 37.054016 120-129
CACAG 6923290 2.0973582 18.890274 140-149
GCTGA 6651085 2.0877857 26.863285 200-209
CAAGG 7278290 2.0798645 20.241991 80-89
AGCAC 6853920 2.076343 21.2804 130-139
GGCTC 7325490 2.0565746 21.291538 80-89
CTACT 4742520 2.0548728 21.74813 50-59
GCCAG 8002470 2.045239 41.319775 70-79
GCAAA 5998920 2.0319767 37.0359 200-209
ATATC 4192990 2.031352 18.3811 110-119
GCACA 6695260 2.028278 19.282412 130-139
CCCTC 6426595 2.0276718 22.743444 20-24
AGGAC 7085225 2.0246935 23.607483 220-229
GAGGA 7490425 2.019099 30.454672 220-229
GCCGA 7878265 2.013495 20.414295 220-229
TGCAC 6047840 2.012557 20.318523 60-69
ATGCA 5397665 2.0083501 23.366257 60-69
GGGGG 10437615 2.0024989 90.50144 5
TCTGT 4451810 1.9986911 19.244099 210-219
CGATT 4875585 1.9927279 46.342556 160-169
CAGCT 5987760 1.992564 15.956975 50-59
TGGTG 6113945 1.9886038 26.708534 35-39
TGAGC 6308990 1.9804014 16.952118 200-209
CAGAC 6524555 1.9765645 30.73419 140-149
CCAGA 6435980 1.9497315 38.014557 170-179
ACAAC 5351900 1.9218 19.837652 180-189
CTCAC 5438740 1.9186717 43.346817 20-24
AGTTA 4156450 1.8994569 14.351776 50-59
CTGTC 5155180 1.8844277 41.054695 30-34
AACTA 4258195 1.8780154 34.268192 130-139
TCTGC 5132785 1.8762414 40.82653 200-209
AGAGA 5856670 1.871294 29.24898 170-179
ACTAT 3847870 1.8641541 19.425219 130-139
CAGTT 4515145 1.8454106 20.30606 190-199
GGTGG 7375440 1.842412 15.213623 40-44
AACAC 5118975 1.8381596 27.63209 190-199
GGTCT 5288965 1.8236938 41.740536 15-19
GGATG 6156230 1.8228619 25.926758 100-109
GGATC 5780935 1.8146441 15.310242 70-79
GTGCA 5777370 1.8135252 56.50194 25-29
GGCTT 5256995 1.8126701 28.259829 25-29
CCTGC 6078645 1.8091271 52.63619 20-24
TGGGG 7203870 1.7995532 121.979904 4
TGGGA 6068395 1.7968539 19.207993 100-109
CCTGG 6336320 1.778873 39.124496 2
TTCTG 3945710 1.7714719 55.471645 30-34
TCTGA 4276805 1.7479972 25.937986 220-229
TCTAT 3272900 1.7417343 14.453572 110-119
CTCAG 5229265 1.7401572 87.65793 6
ACAAT 3937675 1.7366548 28.54016 180-189
GTCAC 5199030 1.7300961 38.699226 160-169
AGAGT 4923700 1.7281069 27.655394 150-159
ACCAG 5697400 1.7259842 13.022278 190-199
TAGTG 4437960 1.7110007 28.070229 120-129
CTACG 5093385 1.6949402 19.703966 130-139
GAGCA 5861670 1.675047 9.582253 200-209
CTGAA 4488435 1.670046 18.879616 200-209
GGGCC 7733515 1.6674656 32.31993 2
TACGC 4991015 1.6608742 29.365973 140-149
GCCGT 5906325 1.6581551 29.609419 230-239
AGTTC 4040870 1.6515669 17.256147 190-199
ATCAT 3408040 1.6510721 25.490917 110-119
GTCCG 5871770 1.648454 39.043804 70-79
TGTGA 4248915 1.6381167 14.968836 150-159
GGAGC 6759005 1.6294771 16.451263 200-209
TCCAT 3757685 1.6281564 20.65718 45-49
CTATT 3054535 1.6255274 17.79598 110-119
GGGGC 7910530 1.6089073 31.446905 90-99
TGTGT 3786390 1.6035404 21.616934 240-247
AGGGG 6990580 1.5897334 35.089504 90-99
GCACT 4756050 1.5826842 22.969158 60-69
TCTCA 3636070 1.5754623 25.148731 100-109
AGTCA 4230745 1.5741653 26.24137 160-169
AGCAG 5467500 1.5624079 14.4238405 50-59
AGTGA 4376735 1.5361345 91.91782 9
GTTAC 3751180 1.533166 12.696749 35-39
AATTC 3158270 1.5300676 32.077206 180-189
CAATT 3147655 1.5249251 31.996792 180-189
TTAGT 3007085 1.5095253 27.992067 110-119
TCTCT 3171075 1.5092809 25.18218 35-39
CGCTG 5363965 1.5058917 18.200176 190-199
CTTTA 2826570 1.5042115 45.307198 45-49
CGTGT 4322560 1.4904666 25.293003 230-239
ACCCT 4203630 1.4829512 34.197372 10-14
ACAGA 4369045 1.4798995 24.062332 140-149
CATGA 3958650 1.472925 19.214895 60-69
CGGCT 5242335 1.471745 28.29131 230-239
AGAGC 5133045 1.4668331 31.068726 220-229
ACTCC 4150785 1.4643087 19.912037 140-149
TACAA 3313490 1.4613669 15.050369 140-149
GTGCG 5439635 1.4405326 17.738201 240-247
CGTCC 4807760 1.430886 14.935416 180-189
TTACA 2939365 1.4240161 10.550101 35-39
CGGCC 6227265 1.4234158 30.45405 230-239
GGCCT 5068380 1.4229084 80.69741 3
CCTAC 4031375 1.4221833 22.724262 190-199
GAGAG 5268935 1.4202801 30.055607 220-229
TCCGT 3882255 1.4191219 17.045647 150-159
GGGTG 5655995 1.4128883 17.236227 60-69
AAGGC 4944245 1.4128811 34.05242 25-29
GGCAG 5845785 1.4093158 14.614691 150-159
GTTCT 3138225 1.4089421 18.249966 190-199
TGACC 4186300 1.393087 9.722913 160-169
GCAAG 4848685 1.3855736 19.37444 25-29
ATTCC 3179930 1.3778226 30.070295 180-189
TGTCT 3066715 1.3768369 40.345314 30-34
ATTGG 3569200 1.3760611 13.415425 100-109
ACCTG 4125040 1.3727015 24.112576 25-29
CCGAT 4119695 1.3709227 30.49791 160-169
CTTCT 2872160 1.3670117 30.227682 30-34
TGGAA 3889065 1.3649737 24.320513 120-129
TAGCA 3655535 1.3601426 12.867202 130-139
ACACA 3776195 1.3559841 7.8606014 130-139
TCATA 2784225 1.3488564 14.495545 110-119
AAGCT 3619210 1.3466269 13.849101 200-209
ATACA 3052675 1.346338 23.52994 35-39
GAAGT 3823730 1.3420424 16.230387 140-149
GTAGC 4254125 1.3353761 19.231678 50-59
GAACT 3574320 1.3299243 16.390165 190-199
TTCTC 2791230 1.3284928 15.996979 190-199
GGGGT 5293275 1.3222796 114.03488 7
CCATG 3970315 1.3212132 14.0565605 160-169
ACATG 3542455 1.318068 17.131992 190-199
GATCT 3219765 1.3159684 12.483602 220-229
CGACA 4310395 1.3058014 17.863707 70-79
AGGCC 5078480 1.2979374 16.193872 2
TTATA 2158445 1.2843275 24.069845 110-119
TCACT 2962750 1.2837214 17.437197 190-199
CTGGT 3710055 1.2792681 25.158144 35-39
TGCGA 4074230 1.278907 13.664674 240-247
ACGCA 4219930 1.2783959 23.735575 140-149
GTGGC 4803975 1.272196 14.758529 100-109
CCTTT 2646935 1.2598152 46.693817 45-49
GTTAT 2498990 1.2544669 18.990604 110-119
TACCA 3161005 1.2468472 14.486729 45-49
ATGAT 2695855 1.2319794 16.26613 120-129
CCATA 3118800 1.2301996 11.045083 160-169
AGGTC 3918180 1.2299225 23.344952 10-14
CATCA 3079000 1.2145005 23.803286 45-49
ATCTA 2496760 1.2095901 16.450893 110-119
ACGCT 3627560 1.2071534 21.816875 190-199
CTCCC 3811665 1.2026283 10.426355 200-209
ACATA 2722560 1.2007457 20.887629 130-139
CAGCA 3945935 1.1953912 17.552027 45-49
AGATC 3207665 1.1935003 15.931717 210-219
GCTTC 3264325 1.1932434 22.974035 30-34
TGAGT 3082090 1.1882617 24.284214 90-99
ATTAG 2586820 1.1821514 27.164896 110-119
GTCCA 3492805 1.1623106 24.76868 180-189
ACAAG 3427030 1.1608167 18.549046 80-89
AACCC 3592265 1.1536734 16.340761 140-149
ATGGG 3871210 1.1462666 23.037447 100-109
TGAGG 3869450 1.1457455 16.619112 220-229
CTCAA 2897400 1.142869 17.521646 150-159
GCAGT 3639410 1.1424164 8.373499 50-59
CTTGA 2788970 1.1398957 25.806038 90-99
GTGAC 3623700 1.137485 9.669363 210-219
CGTGA 3623650 1.1374693 25.034794 150-159
CTATC 2611105 1.1313581 11.259344 110-119
TACAG 3040550 1.1313205 10.232409 120-129
CTCCG 3776275 1.1238953 12.699284 150-159
TTGAG 2909250 1.1216254 24.106653 90-99
CAACC 3462905 1.112129 14.118563 140-149
ATATT 1856750 1.1048115 21.960358 240-247
ACTCA 2793615 1.1019315 15.638955 190-199
CACGT 3307650 1.1006961 14.122017 180-189
GAAGC 3840835 1.0975677 11.000809 200-209
AAACT 2487350 1.0970097 20.319681 130-139
ACACC 3408990 1.0948138 14.955113 40-44
TGGAC 3473420 1.0903119 17.478077 80-89
GCACC 4012065 1.0870322 11.173883 130-139
GCCCC 4474325 1.0842174 12.586027 70-79
TTATT 1649875 1.0783844 18.272564 240-247
ATATG 2359255 1.0781564 8.511676 110-119
AAATA 2178780 1.0744162 23.879383 130-139
GAGCC 4193425 1.0717386 19.766064 220-229
CAACT 2708100 1.0682003 13.692502 130-139
ATCCG 3204000 1.0662042 18.511986 70-79
AGCTC 3200835 1.0651509 12.804575 210-219
TATGA 2319225 1.0598631 9.143411 120-129
CACAT 2685740 1.0593805 13.19566 130-139
TAGCT 2591810 1.0593134 23.478674 50-59
AGCCG 4144440 1.0592192 20.469177 220-229
TGGCA 3371910 1.0584477 11.503467 100-109
TCAAG 2843255 1.0579114 18.789957 150-159
AAGAG 3293980 1.052476 14.012119 150-159
GAGAT 2965805 1.0409302 15.056195 210-219
TAGTT 2071370 1.0398061 13.537511 50-59
ACAGT 2775060 1.0325377 10.412531 120-129
GCCTA 3079310 1.0247107 21.434471 190-199
CGCAG 3995095 1.0210502 18.492651 140-149
AAGGT 2905315 1.0196996 23.526588 15-19
TTACC 2340170 1.0139655 13.544716 45-49
TTGGG 3114845 1.0131253 10.188261 100-109
ATAAA 2051120 1.0114636 16.218304 130-139
AACCA 2814220 1.0105509 15.804285 190-199
CCGAG 3953790 1.0104938 19.860712 220-229
CCCCT 3197630 1.0088927 11.655221 70-79
ATGGT 2606835 1.005033 10.572804 120-129
CCAGT 3017105 1.0040107 16.1034 190-199
GATCC 3017055 1.003994 18.46913 70-79
ACGTC 3014775 1.0032352 15.775624 180-189
GCCAA 3304190 1.0009793 16.261038 180-189
GATCA 2671855 0.99413735 11.594 110-119
TGTCC 2711975 0.991337 43.47183 15-19
GATTG 2569805 0.99075663 16.750015 100-109
GGGAG 4340590 0.9870971 23.277872 5
CGAGG 4087965 0.9855364 14.5170555 220-229
CAGAA 2899895 0.98226345 21.725637 140-149
GATAC 2633530 0.9798775 25.28325 35-39
AATAC 2219710 0.978971 19.421515 130-139
ACAAA 2432780 0.9767618 14.047555 130-139
ATCCA 2474905 0.9762174 12.955245 180-189
TTTCA 1812320 0.9644596 10.146551 100-109
TGATG 2496135 0.96235406 18.514767 120-129
AAGTT 2104100 0.96155316 21.20232 140-149
CGGAC 3738300 0.95541954 9.690219 220-229
GCTTG 2767200 0.9541612 20.73279 90-99
GTATA 2070470 0.94618446 9.077133 240-247
TACAC 2386440 0.9413226 25.07301 35-39
AACTC 2376700 0.93748075 18.055895 190-199
GGTAG 3130960 0.9270784 13.130537 120-129
CATCC 2626585 0.9266034 9.343033 110-119
AGACC 3055215 0.92555416 73.230484 9
ATCAA 2096730 0.92473245 11.829402 110-119
AGAAG 2889180 0.92313635 18.946815 140-149
ACCGC 3400995 0.9214685 9.335624 220-229
ATGAG 2621935 0.9202396 18.853447 60-69
TATGG 2383260 0.9188365 11.918455 35-39
CATAC 2328725 0.9185572 13.902824 130-139
CATGG 2923940 0.9178293 10.472508 200-209
ACAGG 3206110 0.9161869 16.875156 70-79
CCGTC 3078130 0.91611344 11.682811 140-149
TCATC 2113105 0.91558117 13.802936 110-119
GACAG 3197840 0.9138236 16.958004 70-79
GCTCT 2491690 0.9108139 16.221117 210-219
AACTG 2444845 0.909672 13.030277 60-69
TAGAC 2439290 0.9076051 12.224906 170-179
CTATA 1872600 0.9072071 14.355424 50-59
GAACC 2939940 0.8906325 10.546168 190-199
TAACA 2012510 0.8875884 10.325751 120-129
GGTGC 3328115 0.88135654 13.906299 60-69
AGTCG 2786380 0.8746489 10.095454 150-159
AGGCA 3055435 0.87312955 10.874379 80-89
TGGTT 2059645 0.87226206 9.267328 50-59
TCGGA 2768160 0.8689296 63.09209 5
AATAA 1760450 0.8681262 15.525779 130-139
GACCC 3202040 0.86756337 33.692745 10-14
CACGC 3186735 0.8634167 18.03873 190-199
TATAC 1756915 0.8511618 13.065033 130-139
GTCGA 2700460 0.8476785 10.471887 160-169
GTTTC 1884135 0.845904 8.2471485 100-109
CATTA 1745095 0.8454355 14.791571 110-119
GGTAT 2190530 0.8445319 7.083289 110-119
GTAGA 2406215 0.8445267 13.625337 170-179
TTTAG 1676065 0.8413672 27.2437 45-49
ATTAT 1406845 0.83710706 7.157479 50-59
TTTAT 1278650 0.8357458 12.115461 240-247
TCGAG 2653810 0.833035 10.459442 160-169
CTTCG 2277215 0.8324147 76.096054 3
TCCTT 1747105 0.8315388 9.265253 45-49
CCAAC 2579905 0.82854915 11.306591 130-139
CGTAT 2018525 0.82500285 7.291524 240-247
AACGC 2709595 0.8208512 15.978221 180-189
AGCCC 3000590 0.8129823 10.052138 80-89
ATGAC 2178195 0.8104575 10.738417 160-169
GGACT 2578835 0.8095002 8.383661 140-149
ACCAA 2234080 0.80223 13.660861 130-139
ATCTT 1493760 0.794932 9.55241 1
TAAAT 1464650 0.79337925 17.627768 130-139
TTCGG 2295070 0.79136556 72.04285 4
GGGAT 2646925 0.7837554 15.333288 100-109
AGCAA 2306900 0.7814019 6.088359 120-129
ATAGT 1696770 0.7754073 15.188891 120-129
AGTAA 1860830 0.77415127 6.2962866 130-139
CAAAC 2154985 0.773828 16.684225 130-139
TGGCT 2233495 0.77013385 25.080263 40-44
ACGCC 2838075 0.76895046 14.489416 180-189
TTATG 1526455 0.76626456 12.682787 50-59
GCCAT 2297545 0.7645605 6.442321 60-69
ATATA 1411280 0.76446944 13.498952 130-139
AAAAA 1700765 0.7635117 5.4417715 190-199
CAACG 2519345 0.7632165 16.10835 180-189
CGAGT 2420015 0.7596464 13.582784 160-169
GATGA 2161275 0.75855833 6.9787655 60-69
AATCA 1709325 0.75387305 13.0164385 110-119
TAATA 1391715 0.7538714 12.86482 130-139
GGTTA 1954845 0.7536664 8.051069 50-59
TTTAC 1414205 0.75259537 17.563889 45-49
CCAGC 2770760 0.75071204 6.698729 45-49
GAAAT 1794810 0.74668527 7.55095 110-119
GCGGA 3096195 0.7464382 7.6052575 220-229
GGTTC 2155415 0.743211 9.021846 160-169
CACGA 2443305 0.74018073 11.185269 180-189
ACATC 1863220 0.7349404 5.020683 180-189
TCCAC 2075715 0.7322681 13.509733 180-189
ATGCT 1778295 0.7268171 13.137517 50-59
GTCTG 2103390 0.7252722 16.626604 3
GGGAC 3003085 0.723991 6.00536 90-99
AAGCA 2136070 0.7235377 7.89318 120-129
CCCCA 2517365 0.72306126 12.78663 80-89
AGTCT 1760365 0.7194888 19.683752 8
CACAA 1989425 0.71437746 9.451119 130-139
TGCTA 1737585 0.7101782 11.322415 50-59
CCCGT 2365505 0.7040219 11.85098 140-149
CCCAG 2571985 0.6968558 11.02305 80-89
GGGCA 2866685 0.69110733 14.780327 150-159
GATTA 1501200 0.68603367 8.318287 160-169
GCTAC 2053380 0.68330914 11.949816 50-59
GGATA 1941635 0.68146974 16.895351 35-39
CCCCC 2650170 0.68079615 11.073152 80-89
GCGAC 2649355 0.6771114 8.21605 70-79
TCTTC 1400660 0.66664755 36.070557 2
GGAGA 2465155 0.6645006 54.131447 7
GTTCA 1607715 0.6570983 10.881511 160-169
ATGCC 1963590 0.65342945 7.1584744 50-59
GACTG 2065060 0.6482254 9.822008 1
GGAGG 2832595 0.64416265 12.311021 6
GGCCC 2812530 0.64288247 12.725049 70-79
GTTCC 1747020 0.6386068 9.677463 140-149
CCCTA 1806420 0.6372665 13.813241 110-119
AGATG 1801475 0.63227683 6.066081 120-129
CTGCG 2227925 0.6254727 14.253006 25-29
CTGAC 1866430 0.62109727 9.321408 220-229
GTCTA 1513845 0.61873215 9.55313 30-34
GGGTT 1892170 0.6154417 7.292736 30-34
AAATC 1388560 0.6124043 8.17964 110-119
TCAAC 1542145 0.60829353 7.9212003 110-119
GTAAC 1618085 0.60205317 9.150755 120-129
CCTAT 1380910 0.5983305 7.9786587 110-119
TATTG 1190480 0.59760857 5.1190586 50-59
GTAAT 1305610 0.596651 6.564682 130-139
GACCA 1966405 0.5957075 5.865824 170-179
GTCCT 1623135 0.5933218 6.547087 45-49
GGCAA 2065660 0.5902887 7.5468326 80-89
TTCAT 1094265 0.5823334 5.5798173 100-109
CTTTG 1289730 0.5790391 7.0026846 120-129
TATTT 876040 0.57259357 5.145312 110-119
AAGTA 1363185 0.56711864 7.4922886 120-129
CGGAG 2339800 0.5640846 48.52059 6
ACCCG 2046325 0.55443305 9.095258 140-149
CACCG 2033445 0.5509433 8.17069 45-49
TGCCA 1638110 0.5451185 6.26107 60-69
GGGGA 2391885 0.5439405 11.089305 4
GACCG 2120175 0.54186577 6.2420278 220-229
CCGTA 1619710 0.5389955 5.768659 230-239
GGTTT 1258835 0.53311807 7.7999153 100-109
AAGAT 1277555 0.53149444 6.5238695 15-19
CCACG 1958365 0.5306011 10.055101 180-189
TGCGC 1878105 0.52726346 10.604313 25-29
AATGG 1500100 0.52650106 8.262654 120-129
GGTGA 1764215 0.5223847 9.189383 9
ACCTA 1309210 0.5164132 6.4873586 130-139
TCTTT 879050 0.5138667 5.27622 120-129
TTCAA 1059575 0.5133258 5.375042 200-209
CGCCG 2242295 0.5125392 7.666943 220-229
GCCGC 2235755 0.5110443 9.190368 220-229
TATGT 1014390 0.5092132 6.957596 140-149
GACGA 1777795 0.5080276 8.707688 220-229
GCGCT 1803885 0.50642675 10.087608 25-29
TCCGG 1763830 0.49518162 7.1033707 70-79
TGTTT 897410 0.49484977 5.18156 240-247
GAAGA 1525145 0.4873067 7.0991945 15-19
CATGC 1463455 0.4869981 9.614646 60-69
CCGCG 2120395 0.4846756 5.748218 220-229
TTGGT 1139350 0.48251602 7.915966 120-129
TCAAT 992985 0.48106533 7.7581263 110-119
ACGAC 1560645 0.4727856 8.650716 220-229
GCATG 1500030 0.47086164 9.983802 60-69
TGGCC 1655225 0.4646916 18.104221 2
CGCGG 2145885 0.462686 5.3143287 220-229
ACGAG 1618680 0.4625585 10.068225 180-189
CCATT 1057645 0.458264 5.656625 110-119
CAGTC 1373810 0.45716667 5.2232404 210-219
TTAGC 1114940 0.45569342 8.086576 45-49
CATAG 1210735 0.4504874 6.259147 120-129
CCGGC 1970455 0.45040265 5.732899 70-79
CGAGC 1733280 0.44298467 9.848475 180-189
CATAA 992960 0.43793067 6.101644 110-119
TTTGG 1029465 0.43597963 6.6980042 120-129
ATTAA 795780 0.43106225 6.552004 110-119
ACATT 884180 0.42835325 7.258606 110-119
GGTAA 1216975 0.42713064 8.961796 120-129
TCACG 1281900 0.42658153 6.0546937 160-169
TACCT 983330 0.42606422 5.0649643 2
CAATG 1128500 0.41988954 7.060849 120-129
TACTT 786320 0.41845474 8.41525 1
TGACG 1331250 0.4178814 8.526464 220-229
ATGGC 1330500 0.41764593 7.985473 1
CGGTT 1199505 0.41360262 8.909506 160-169
ATCCT 953435 0.41311112 5.498178 110-119
GGCAC 1600215 0.40897647 6.843 35-39
ACTTC 935275 0.40524262 23.894491 4
AGCTT 991305 0.4051619 6.133694 45-49
AACAT 887945 0.3916153 5.8372216 110-119
AGGGT 1300210 0.38499263 5.066866 7
CAATC 966035 0.381049 6.0657845 110-119
CAAGT 1019390 0.37929222 5.425259 180-189
AAGTC 993580 0.36968884 5.4547606 180-189
CGGCA 1429490 0.3653433 5.6724577 70-79
GTTTA 726015 0.36445194 5.1412926 240-247
TTTCT 598945 0.3501256 9.065938 2
ATCCC 989920 0.34922272 6.5506353 110-119
ACCCC 1213590 0.3485788 5.222817 140-149
GAGGC 1442015 0.34764445 8.792201 35-39
ACGAT 907925 0.33781856 6.7934046 160-169
CCGGT 1201220 0.33723322 7.108315 160-169
TCACA 849765 0.33518675 11.510287 5
GCGAG 1366695 0.3294861 6.9429035 240-247
CCTAA 832935 0.32854822 6.7888494 110-119
CACTT 755155 0.32719895 5.680822 3
GCCTT 861860 0.31504485 7.5675263 1
CTCGG 1076185 0.3021306 8.879633 6
ATGTG 780250 0.30081576 5.2471437 140-149
GCTTA 728495 0.2977473 5.3329115 110-119
CGGTG 1118775 0.29627573 8.240998 8
GCTTT 655350 0.29422688 6.484216 45-49
TGCTG 850985 0.29342908 15.083023 1
GAGGT 973090 0.28813228 15.8402195 7
TGGGC 1080845 0.28623104 10.457525 1
ATTCT 512740 0.27286404 7.0713005 2
TGTAA 593145 0.27106145 10.492279 25-29
CCTCG 910585 0.27100843 9.8030615 5
TAACT 526965 0.2552955 6.678721 2
AATCT 509310 0.24674228 6.6014795 2
TTGGC 682835 0.23544908 8.669947 1
CTCTT 493560 0.23491107 7.2751265 1
TAAGG 669255 0.2348933 5.581612 25-29
CGGGG 1107835 0.2253204 10.913576 3
GTAAG 629710 0.2210139 5.9444733 25-29
TTCTT 375515 0.21951501 14.590825 1
TTCCT 453160 0.21568263 6.3631563 4
CTTTC 435090 0.20708215 5.3961024 45-49
AACCT 500150 0.19728234 5.1535363 2
TCGGT 569135 0.19624406 10.710158 7
AACTT 399635 0.19360872 8.234944 3
TGCCT 473955 0.17324981 5.1770763 4
TGCTT 354375 0.15910073 8.430605 1
GACTT 375975 0.15366687 5.2320843 1
GTCTT 338050 0.15177143 9.333923 1
TAGGC 448635 0.1408272 7.459419 1
TTGCT 197880 0.08884049 5.5816946 4