FastQCFastQC Report
Thu 4 May 2017
HCGCLBCXY_s2_2_illumina12index_11_SL248358.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGCLBCXY_s2_2_illumina12index_11_SL248358.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 10625125
Filtered Sequences 0
Sequence length 50-251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 46039 0.43330313761014577 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 45837 0.4314019835060764 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 45717 0.4302725850284114 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 41437 0.3899907059916942 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 37695 0.3547722967965083 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37326 0.3512993964776885 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 37099 0.3491629510241056 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 36501 0.3435347819437419 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 34310 0.3229138480723756 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 33451 0.3148292373030906 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 32049 0.3016340984223715 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31830 0.29957294620063296 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 30615 0.28813778661427514 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 30570 0.2877142621851507 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28685 0.2699732944318302 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 28508 0.2683074316772744 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27152 0.25554522887966025 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26935 0.25350289996588277 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26300 0.24752649968823895 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26182 0.24641592451853508 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26084 0.24549358242844205 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25812 0.24293361254573476 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25639 0.2413053964071011 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 25537 0.24034540770108587 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 24284 0.2285526052634675 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24193 0.22769614475123823 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23382 0.22006329337301914 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23286 0.21915977459088715 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22985 0.2163268667427442 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22815 0.21472688556605216 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 22274 0.20963518076257928 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 22251 0.20941871272102683 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 22134 0.20831754920530346 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21982 0.20688697780026116 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21762 0.20481641392454206 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 20429 0.19227067916848037 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20316 0.19120716226867918 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 19806 0.18640721873860308 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19709 0.18549428830249057 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 19400 0.18258608722250325 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19165 0.18037434853707604 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18920 0.17806849331184338 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18692 0.17592263620427995 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18607 0.17512264561593394 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18530 0.17439794825943225 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18304 0.1722709144598299 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18096 0.17031329043187726 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17917 0.16862860436936036 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17617 0.16580510817519795 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17593 0.16557922847966494 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17507 0.16476982623733838 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17355 0.16333925483229608 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16087 0.15140527758496958 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 16086 0.15139586593098905 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 15920 0.14983353137021918 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15542 0.14627592616557453 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15527 0.1461347513558664 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 15352 0.14448771190927165 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15254 0.14356536981917858 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14829 0.1395654168774485 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14601 0.13741955976988507 No Hit
TCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14515 0.1366101575275585 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14096 0.13266667450971165 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 13894 0.1307655204056423 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13416 0.1262667498029435 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 13365 0.12578675544993587 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13304 0.12521264455712286 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 12910 0.12150445288878955 No Hit
TTCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAC 12837 0.12081740214821002 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 12799 0.12045975929694944 No Hit
GGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 12777 0.12025270290937755 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12132 0.11418218609192832 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12050 0.11341043046552393 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11955 0.1125163233373725 No Hit
GTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 11704 0.11015399818825661 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11339 0.106718744485359 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 10957 0.10312349266479218 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 10956 0.10311408101081163 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10932 0.10288820131527865 No Hit
TACGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAC 10824 0.10187174268538018 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGA 10629 0.10003647015917459 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 20963070 7.819115 68.24894 35-39
TGGAT 16137015 7.4327407 81.38712 35-39
TATTA 10008420 7.1044245 153.49937 240-247
TCACC 16343635 6.742374 77.26893 160-169
TCTCC 14141345 6.384472 91.77962 20-24
TGTAT 10134815 6.062412 84.38814 240-247
CTGTG 14645195 5.9781656 86.0582 25-29
CTGAG 16011950 5.972374 50.552734 15-19
AGTGG 16612805 5.89203 39.74784 100-109
TCCCT 12510920 5.6483755 69.53292 10-14
TTACT 8650825 5.4421167 132.74098 240-247
TGGGT 13975090 5.4243364 44.042793 100-109
TTCAC 10295410 5.244824 80.26686 40-44
ATTAC 9095810 5.228555 125.028984 240-247
CCTGA 12638405 4.9576488 52.34352 15-19
ATTCA 8418950 4.839474 114.962 40-44
CTCCA 11483245 4.737278 43.78096 80-89
AGCCT 11823770 4.638093 55.223392 210-219
CAGCC 14403825 4.575497 59.40748 30-34
CTCTG 10579585 4.5417385 72.07242 35-39
TCTGG 11010120 4.4943285 133.53116 35-39
TGAGA 10626165 4.4723144 90.51803 15-19
ACACG 12428510 4.4548435 55.955826 230-239
CCAGG 14660535 4.428223 52.50108 80-89
AAGGG 13557425 4.3936877 38.758972 90-99
TGGAG 12360445 4.383854 36.028904 90-99
GACAC 12013265 4.3060045 55.695587 230-239
ACCAT 9230995 4.2970037 67.65673 160-169
TACTG 8810735 4.267944 93.22265 240-247
TCAGT 8746355 4.2367578 104.721344 7
CACCT 10226325 4.21875 52.775776 40-44
TCCAG 10748915 4.216461 42.125687 80-89
TACTA 7173020 4.1232753 33.730694 130-139
CCCTG 11790695 4.0989237 80.86091 10-14
CACCA 10844870 4.0880723 58.44549 160-169
GTATT 6822935 4.0813212 91.873795 240-247
GAAGG 12584725 4.0784554 31.930552 150-159
GATTC 8394045 4.0660977 61.170273 40-44
TGAAG 9486670 3.9927266 41.299458 150-159
CTGGG 12553190 3.945691 128.75996 3
ACTAC 8440300 3.9289374 34.2007 130-139
GCTGG 12298750 3.865716 37.805817 90-99
GACTC 9655710 3.7876315 52.66182 20-24
GGGTC 11947035 3.7551656 112.763794 8
GAGAC 10967095 3.7378707 63.9572 8
TCCTG 8700605 3.7351062 69.89847 20-24
AGACT 8368765 3.7042294 66.16264 15-19
GGACA 10783860 3.6754196 31.46041 220-229
CTCCT 8024800 3.6230016 101.17465 20-24
AGCTG 9667130 3.605789 35.205593 60-69
TATCT 5690155 3.5795996 60.177486 200-209
GAGTG 10032140 3.5580788 39.11334 90-99
CAAGA 8660495 3.5027504 42.727898 180-189
ACTGT 7200940 3.4881546 78.75941 240-247
GGTCC 10546310 3.4861832 139.45071 9
CCTGT 8049445 3.455568 65.713554 25-29
CATCT 6629290 3.3771806 39.330822 170-179
CCATC 8179005 3.3741524 29.485346 170-179
ACTCT 6609830 3.3672671 69.58072 20-24
CTATG 6924730 3.3543575 35.414547 50-59
ACTGG 8988720 3.3527458 42.361343 60-69
CTGCA 8340460 3.2717001 40.261032 200-209
ACCTT 6377245 3.2487805 85.21397 40-44
AGTAG 7564895 3.1838944 30.535284 50-59
GGATT 6897085 3.1768107 57.41044 40-44
GGCTG 10020580 3.1496465 38.350975 90-99
AGACA 7652210 3.0949476 34.393986 170-179
ATCTC 6062810 3.0885968 55.58637 170-179
GTCCC 8878075 3.0863793 76.50307 10-14
GTGTA 6581760 3.0315716 44.28793 230-239
GGAGT 8525780 3.023821 33.565086 90-99
GTGAA 7150340 3.0094175 44.48635 10-14
GAGCT 8063160 3.0075164 24.65207 60-69
ATCTG 6203805 3.0051398 44.236546 200-209
GACAA 7405935 2.9953413 27.253311 180-189
CCTCA 7143345 2.9469028 89.58322 5
GTCTC 6781495 2.9112465 32.90026 15-19
GCTAT 5909475 2.8625655 47.96895 50-59
TGTGC 7006470 2.8600395 58.610935 25-29
AAGAA 6171590 2.8165438 36.569565 190-199
CTTCA 5511460 2.807721 62.180634 45-49
TATGC 5792450 2.8058784 25.989079 50-59
AGGCT 7454965 2.7806628 25.815203 25-29
GGAAG 8514905 2.7595088 23.425396 80-89
TATCA 4799795 2.7590716 19.921404 170-179
TGCAA 6197025 2.7429616 39.560116 200-209
GAACA 6759835 2.7340252 40.07084 210-219
CGCCA 8575915 2.7242122 44.05961 70-79
CCTTC 6026195 2.7206798 72.46918 45-49
AGGGC 9456905 2.7161138 35.444695 150-159
ATCAG 6021305 2.6651835 22.593128 45-49
CAGGC 8770270 2.649065 36.898895 70-79
ACAGC 7384540 2.6468961 31.5064 210-219
ATGAA 5246820 2.620509 32.499226 210-219
GCTGT 6403390 2.6138625 26.446747 230-239
AGGGA 7892850 2.5579133 33.15238 80-89
CAGGG 8871375 2.5479438 30.481674 80-89
CAGTG 6810450 2.5402622 80.77144 8
CCAAG 7060400 2.530712 38.189808 180-189
GTATC 5216940 2.5270996 28.85526 200-209
GTGGA 7112155 2.5224535 24.656904 100-109
CTACA 5361065 2.4955616 24.104385 190-199
GCAGC 8244280 2.4901893 36.873 30-34
GGGCT 7911940 2.4868636 47.07666 90-99
AGAAC 6130600 2.47953 34.990986 190-199
GCCTC 7116400 2.4739494 81.3895 4
GGGAA 7547940 2.446135 28.10175 80-89
TATAT 3440355 2.442118 27.974314 110-119
GCCTG 7366355 2.4350193 38.52343 210-219
TCCAA 5227375 2.4333293 45.320312 180-189
GAGTC 6507300 2.4271889 28.524202 160-169
CAAAT 4582265 2.406858 37.221073 200-209
CTCTC 5255575 2.3727639 99.78964 20-24
AGCTA 5338040 2.362753 37.064148 50-59
CACTG 6013605 2.3589482 23.36427 60-69
TCAGC 5982820 2.346872 14.742223 45-49
GTGGT 6040870 2.3447227 27.53821 120-129
CACGG 7742240 2.3385482 51.875805 230-239
ATGGA 5549250 2.3355548 17.450289 120-129
CCGCC 8295360 2.3352995 36.498913 70-79
GCTCC 6714660 2.3342884 36.73113 80-89
TGAAC 5249290 2.3234699 43.989697 210-219
AATGA 4635660 2.3152668 32.0452 210-219
ACGGC 7659930 2.3136861 54.513733 230-239
TTCAG 4753620 2.3026662 59.00498 45-49
CAGTA 5183360 2.2942877 23.142384 45-49
GATGG 6430875 2.2808254 25.607595 100-109
CCCTC 6212265 2.27123 24.429628 20-24
TTCCA 4448670 2.2663004 30.028486 180-189
AAATG 4531280 2.2631347 34.724216 200-209
TACAT 3923095 2.2551172 22.48909 190-199
GTAGT 4842185 2.2303197 28.983389 120-129
TGGTG 5665695 2.1991014 29.690649 35-39
CATAT 3811765 2.1911213 16.023905 170-179
TCCGC 6300320 2.1902468 45.157 70-79
TGCAG 5859515 2.1855686 45.487015 30-34
GTGGG 7304570 2.1831467 30.637245 100-109
CTACT 4282255 2.1815228 21.321209 50-59
CTGTA 4485860 2.172963 29.570269 190-199
CCTCT 4803370 2.1686041 53.359463 35-39
TGGTA 4701390 2.1654696 35.51615 120-129
CAAGG 6350420 2.1643882 19.74587 25-29
GGCCG 8463030 2.1541295 26.411814 230-239
ATATC 3740925 2.1504002 18.83852 110-119
AGCAC 5997580 2.1497574 22.205572 130-139
GCAGA 6301455 2.1476996 26.000408 140-149
ATACT 3722510 2.1398149 32.72155 130-139
CTGTC 4951715 2.1257353 44.19698 30-34
TGCAC 5393740 2.1157947 19.369919 60-69
CACAG 5862265 2.1012554 18.840656 140-149
CCGTG 6255585 2.0678434 22.644312 230-239
GCCAG 6837165 2.0651696 39.5218 70-79
GGCTC 6238005 2.0620322 19.742722 80-89
CTCAC 4997655 2.061724 47.703335 20-24
CAGCT 5237535 2.0545204 15.936966 50-59
CAGAG 6013655 2.0496097 33.78544 170-179
ATGCA 4581005 2.02767 22.675823 60-69
GCTGA 5411125 2.0183213 28.416578 200-209
GGTGG 6693890 2.0006301 16.905497 40-44
GCACA 5577115 1.9990473 18.818796 130-139
GGATC 5322025 1.9850874 16.413372 70-79
AACTA 3775705 1.9832083 36.234276 130-139
CAGAC 5510755 1.9752611 28.77735 140-149
TAGTA 3607690 1.9719174 20.169773 120-129
AACAG 4846750 1.9602754 38.123734 210-219
TGAGC 5205575 1.9416522 17.75293 200-209
CCTGC 5558030 1.9321966 52.769215 20-24
AGAGT 4588330 1.9311249 29.904366 150-159
CAGTT 3970250 1.9231997 22.691048 190-199
GGGGG 8301115 1.9103849 82.700905 5
GGATG 5365410 1.9029391 26.675064 100-109
AGTTA 3480625 1.9024652 13.646899 50-59
TGGGA 5340400 1.8940688 19.207502 100-109
TCTGT 3561600 1.8880857 21.614521 210-219
TCTAT 2998955 1.886602 15.161726 110-119
CCAGA 5235485 1.8765942 35.601395 170-179
ACAAC 4408000 1.8749461 17.90848 140-149
GGCTT 4579135 1.8692019 28.050976 25-29
ATCAT 3245890 1.8658388 26.055588 110-119
ACTAT 3230090 1.8567563 19.111408 130-139
GCAAA 4568195 1.8476132 35.48028 200-209
CGATT 3780165 1.8311219 42.657715 160-169
GGTCT 4479410 1.828494 41.31514 15-19
ACCAG 5067680 1.8164464 14.297232 190-199
TTCTG 3417165 1.8115175 54.678795 30-34
AGGAC 5308525 1.8092831 23.252645 220-229
GAGGA 5581555 1.8088692 30.444754 220-229
CCTGG 5463940 1.8061576 34.998135 2
GCCGA 5969665 1.8031408 19.351961 220-229
GTCAC 4557175 1.7876365 40.285587 160-169
TGGGG 5974660 1.785671 111.518166 4
AACAC 4180165 1.7780364 27.861204 190-199
ACAAT 3355380 1.7624304 28.880598 180-189
AGAGA 4554265 1.7514751 27.423512 170-179
CTCAG 4450515 1.7457972 84.95782 6
GTGCA 4669755 1.7417941 50.70234 25-29
TAGTG 3772790 1.7377545 27.199917 120-129
GGAGC 6050330 1.7377129 17.120655 200-209
AGTTC 3529855 1.7098712 19.229702 190-199
TCCAT 3350835 1.7070267 22.037102 45-49
CTGAA 3854355 1.7060361 20.916842 200-209
TCTGC 3941845 1.6922053 39.30321 200-209
CTATT 2681735 1.6870431 18.113258 110-119
GCACT 4277575 1.6779581 21.978195 60-69
TCTGA 3459390 1.6757379 27.63524 220-229
GAGCA 4913980 1.674812 9.639993 200-209
CTACG 4229705 1.65918 18.671997 130-139
GTTAC 3415085 1.6542764 13.672563 50-59
AGTCA 3731080 1.6514714 28.200733 160-169
TCTCA 3230770 1.6458616 23.39818 100-109
TCTCT 2938070 1.6380209 26.496008 35-39
ACCCT 3954545 1.6314011 38.044624 10-14
GGGCC 6392160 1.6270225 30.134962 2
TACGC 4143820 1.6254903 27.515018 140-149
TACAA 3069485 1.6122626 16.37594 140-149
AGCAG 4652440 1.5856724 14.585515 50-59
GCCGT 4763500 1.5746205 31.302298 230-239
GGGGC 6503330 1.5739864 29.825308 90-99
TGTGA 3413525 1.5722764 14.419361 210-219
GTCCG 4750635 1.5703679 35.81763 70-79
CTTTA 2495390 1.5698161 43.58297 45-49
CGCTG 4724145 1.5616114 18.388165 190-199
TTACA 2713470 1.5597869 11.785081 120-129
AGGGG 5686865 1.5530703 33.514175 90-99
AGTGA 3659200 1.5400752 90.865906 9
ACAGA 3777150 1.5276741 24.266296 140-149
TGTCT 2868265 1.520533 43.589867 30-34
ACCTG 3863035 1.5153471 26.632517 25-29
CGTCC 4352425 1.5130796 16.404531 180-189
AATTC 2628815 1.5111246 32.288857 180-189
GTTCT 2848200 1.509896 20.323555 190-199
ATTGG 3273405 1.5077368 14.891262 100-109
CAATT 2613600 1.5023787 32.235188 180-189
AAGGC 4355480 1.4844607 33.66593 25-29
TTCTC 2637230 1.4702978 17.642776 190-199
CTGGT 3583845 1.4629247 26.752567 35-39
CATGA 3300060 1.4606909 17.827097 60-69
GGCAG 5069055 1.4558811 14.738449 150-159
CGTGT 3565520 1.4554445 26.534487 230-239
CCTAC 3518825 1.4516498 22.889576 190-199
GGCCT 4391235 1.4515647 77.20114 3
TGGAA 3421930 1.4402136 24.553003 120-129
TGTGT 2848770 1.4359959 22.263704 240-247
GGGTG 4792075 1.432227 17.060019 60-69
ACTCC 3466755 1.430169 19.071554 140-149
GTGCG 4545095 1.4286042 19.489857 240-247
CTTCT 2555535 1.4247515 30.46417 30-34
TCCGT 3287790 1.4114243 16.767189 150-159
TGACC 3596525 1.4108037 9.943841 210-219
CATCA 3005705 1.3991477 25.711472 45-49
GCAAG 4103990 1.3987464 19.839666 25-29
TTAGT 2325270 1.3909225 25.209377 110-119
GATCT 2843100 1.3772051 13.700974 220-229
AAGCT 3103555 1.3737128 15.413414 200-209
ACACA 3177530 1.3515646 7.878929 130-139
ATTCC 2651150 1.3505839 30.116491 180-189
TCATA 2346820 1.3490251 13.985904 110-119
CGGCT 4079060 1.3483725 28.829943 230-239
GAAGT 3203690 1.3483611 15.997492 140-149
AGATC 3044290 1.3474805 16.890192 210-219
GTGGC 4276355 1.3441344 14.308977 100-109
TAGCA 3031490 1.341815 12.333436 130-139
AGGCC 4431825 1.3386352 17.351557 2
CCATG 3391420 1.3303474 14.365687 160-169
ATACA 2532670 1.3302978 23.118538 35-39
AGAGC 3890445 1.3259647 30.380556 220-229
ATCTA 2277180 1.3089939 17.703266 110-119
AAGAG 3398255 1.3068979 15.944502 150-159
AGGTC 3451275 1.2873075 22.461266 10-14
ATGAT 2346440 1.2825344 16.17421 120-129
ACATG 2890075 1.279221 17.415361 190-199
CGACA 3568460 1.2790699 17.444517 70-79
TACCA 2741880 1.276338 15.025194 45-49
GTAGC 3403870 1.2696257 17.49169 50-59
CCGAT 3233590 1.2684355 27.781881 160-169
GGGGT 4239100 1.2669572 104.0747 7
TGCGA 3395945 1.2666696 14.833821 240-247
CCTTT 2265555 1.263083 43.15323 45-49
CTCAA 2713315 1.263041 19.106567 150-159
CGGCC 4718040 1.2629563 31.56535 230-239
GCTTC 2927925 1.2569369 25.317896 2
CCATA 2683660 1.2492367 12.244937 160-169
TTATA 1757255 1.2473781 23.506153 110-119
AACCC 3303635 1.2453352 17.770136 140-149
GTCCA 3165165 1.2415947 26.74422 180-189
CAGCA 3458910 1.2398031 16.906244 45-49
CTCCC 3383770 1.2371206 11.4141245 200-209
GAGAG 3814695 1.2362657 29.897034 220-229
ACGCA 3446640 1.2354051 22.242098 140-149
TACAG 2788965 1.2344671 11.281035 120-129
TCACT 2418055 1.2318375 14.927686 190-199
ACGCT 3137315 1.23067 22.046303 190-199
CAACC 3243655 1.2227253 15.249959 140-149
TGAGT 2652580 1.2217835 24.217962 90-99
ATCCG 3103765 1.2175094 19.724468 70-79
ATGGG 3375505 1.1971835 23.3603 100-109
GCAGT 3209500 1.1971266 8.726009 50-59
GAAGC 3503065 1.1939355 12.237418 200-209
AAAAA 2196715 1.1896712 6.5700703 90-99
GAACT 2646470 1.1713953 14.136888 190-199
CTTGA 2414190 1.1694402 25.436243 90-99
GCACC 3660165 1.1626824 12.120318 130-139
TTGAG 2520545 1.1609681 24.061457 90-99
ACAAG 2869785 1.1606889 18.174803 80-89
GTTAT 1937020 1.1586806 18.334055 110-119
ACATA 2200025 1.1555743 19.835056 130-139
GTGAC 3096160 1.1548514 10.966637 210-219
GCCCC 4097370 1.1534867 12.6939125 70-79
AAACT 2191170 1.1509231 20.694492 130-139
TCAAG 2584825 1.1441096 20.861437 150-159
TTGGG 2925685 1.135585 11.375662 100-109
CACGT 2890550 1.1338719 15.606875 180-189
ATGGT 2453540 1.1301053 11.545198 120-129
CTATC 2202550 1.1220521 11.134717 110-119
GATTG 2428430 1.1185396 18.665272 100-109
CGTGA 2994935 1.1170951 24.759508 150-159
ATTAG 2043700 1.1170605 24.930641 110-119
CAACT 2392710 1.1138002 15.231102 130-139
TGTCC 2594275 1.1137034 47.17872 15-19
CTCCG 3192815 1.1099521 12.509067 150-159
GATCC 2825220 1.108245 19.6631 70-79
TGGAC 2929740 1.0927776 17.025532 80-89
AGACC 3044285 1.0911858 83.007706 9
AAGGT 2591995 1.0909125 24.281189 15-19
CACAT 2342875 1.0906022 12.804214 130-139
AACCA 2536370 1.0788468 17.367151 190-199
AGCTC 2740205 1.0748962 14.226059 210-219
ATATG 1958895 1.0707071 8.27422 110-119
TGGCA 2867470 1.0695512 11.353418 100-109
CCAGT 2722570 1.0679786 17.953474 190-199
ACACC 2827050 1.0656822 15.365416 40-44
ACAGT 2396865 1.0609138 11.633934 120-129
GATCA 2390215 1.0579703 12.3232975 110-119
TCGGA 2835590 1.0576602 69.98867 5
ACTCA 2260840 1.0524151 13.492392 190-199
TGAGG 2960565 1.0500176 16.78072 220-229
ACGTC 2672125 1.0481906 17.300608 180-189
ATATT 1474950 1.0469854 23.763508 240-247
TTACC 2053335 1.046037 14.001282 45-49
AAATA 1758930 1.0424898 23.336708 130-139
GATAC 2345830 1.0383244 24.891222 35-39
CCCCT 2833905 1.0360875 11.438569 70-79
CAGAA 2550230 1.0314443 22.134441 140-149
GCCTA 2618350 1.0270964 21.95474 190-199
GGGAG 3751410 1.0245018 22.862444 5
TAGCT 2101810 1.0181223 21.540295 50-59
TAGTT 1688345 1.0099288 12.999313 50-59
GTAGA 2395050 1.0080228 15.3671255 170-179
CGCAG 3328710 1.0054388 17.370705 140-149
TAGAC 2260060 1.0003604 13.590405 170-179
GAGAT 2371895 0.9982773 15.743884 210-219
TATGA 1817295 0.9933104 9.2012 120-129
GACCC 3124075 0.9923889 37.663322 10-14
GCTTG 2428190 0.9911866 20.347012 90-99
ATCCA 2124930 0.98914933 13.137814 180-189
AGTCG 2649035 0.98807615 11.335161 150-159
ATAAA 1665355 0.9870294 16.224854 130-139
TATGG 2142480 0.98683053 13.625033 35-39
TCATC 1915440 0.9757887 13.49793 110-119
ACAAA 2033070 0.97578144 14.625616 130-139
TGGTT 1933665 0.9747137 9.948587 50-59
TGATG 2110115 0.97192305 18.389458 120-129
ATCAA 1850090 0.97176915 12.869513 110-119
AATAC 1835260 0.96397966 18.672464 130-139
CATCC 2334180 0.96293855 8.637841 110-119
AGAAG 2497225 0.96038055 19.239225 140-149
GTATA 1755930 0.95976895 9.764714 240-247
TACAC 2051180 0.9548189 25.12346 35-39
AAGTT 1743240 0.95283276 20.937067 140-149
CCGTC 2734100 0.95048404 12.548879 140-149
GAACC 2640235 0.94635916 11.530683 190-199
CTTCG 2191040 0.9405975 82.315796 3
GTCGA 2507255 0.935193 11.599759 160-169
GACAG 2739040 0.93353593 16.679037 70-79
GAGCC 3088850 0.9329889 18.754541 220-229
TCCTT 1652085 0.9210638 10.134814 45-49
AGCCC 2896700 0.9201613 10.747292 80-89
CATGG 2453385 0.91509986 11.358472 200-209
TCGAG 2450470 0.91401255 11.56881 160-169
ACCAA 2148265 0.9137661 15.37806 130-139
ACAGG 2678815 0.9130098 16.619886 70-79
GGTAG 2566580 0.9102836 11.95175 120-129
GGTGC 2893100 0.9093527 13.805287 60-69
CGGAC 3007730 0.9084866 11.000013 220-229
TTCGG 2224560 0.9080649 78.48974 4
AGCCG 3005885 0.9079293 19.343996 220-229
GCTCT 2110640 0.9060824 18.194685 210-219
ATGAG 2149080 0.90449953 17.87879 60-69
TAACA 1719485 0.90316826 10.534987 120-129
TTTCA 1434500 0.9024246 8.392114 100-109
CATTA 1568835 0.9018152 12.8547945 110-119
CCAAC 2377705 0.8962975 12.51916 130-139
CTATA 1552745 0.89256614 13.529761 50-59
TTATT 1139760 0.8854147 14.6399975 240-247
CGTAT 1826715 0.88486564 7.721822 240-247
AGGCA 2579925 0.8793054 10.808976 80-89
CATAC 1877760 0.87409234 13.5054245 130-139
ACCGC 2741430 0.87083846 10.245818 220-229
GCCAA 2414305 0.8653775 14.152969 180-189
CCGAG 2859950 0.86384946 19.052458 220-229
GGTAT 1869820 0.86124265 7.101871 110-119
CGAGG 2969750 0.8529406 14.115572 220-229
CGAGT 2286620 0.8528973 15.088231 160-169
TGGCT 2086495 0.8517068 26.808786 40-44
GGTTA 1847995 0.8511901 8.769331 50-59
AATCA 1610525 0.8459364 14.71906 110-119
TTTAG 1411795 0.844503 25.347847 45-49
AATAA 1422220 0.84292716 15.382405 130-139
GGGAT 2371930 0.8412476 15.784926 100-109
TAAAT 1295735 0.8404454 17.494596 130-139
AACTG 1886800 0.8351459 10.69777 60-69
ATTAT 1175250 0.834245 6.8305144 50-59
CACGC 2611095 0.8294365 18.1302 190-199
CCCCA 2457945 0.8211326 13.845582 80-89
GGACT 2188255 0.81620765 7.9749923 90-99
ATAGT 1479545 0.8087005 15.744485 120-129
ATGAC 1817415 0.80443436 11.005115 160-169
GGAAA 2085385 0.80199546 5.1606607 110-119
AACTC 1722675 0.8019007 15.559123 190-199
GTTTC 1510195 0.80058897 6.7406116 100-109
CCAGC 2516325 0.79933196 7.1808286 45-49
ACATC 1713630 0.7976903 5.455701 180-189
CAAAC 1871785 0.79616517 16.789152 130-139
CCCAG 2471820 0.7851945 11.8297415 80-89
TCCAC 1898545 0.78322244 13.49306 180-189
TTTAC 1238000 0.778809 18.159939 45-49
ATCTT 1232275 0.7752075 11.447653 3
AGTAA 1550220 0.7742529 6.3599033 130-139
GGTTC 1869250 0.76302737 8.970882 160-169
AGCAA 1886555 0.7630199 5.8686996 120-129
TATAC 1324030 0.7610937 10.795504 130-139
AAGCA 1877740 0.7594547 8.597051 120-129
GCCAT 1921815 0.7538676 6.053706 60-69
GGGAC 2623010 0.75335366 6.624365 90-99
GATGA 1788445 0.75271636 6.2750645 60-69
GGAGA 2287120 0.7412094 60.57689 7
AACGC 2057475 0.7374762 13.999003 180-189
CCCGT 2109190 0.73323995 12.589982 140-149
ATGCT 1508830 0.7308813 12.739959 50-59
GAAAT 1459290 0.72883815 8.55035 110-119
GTCTG 1779775 0.7265038 18.713352 3
GGATA 1723540 0.7253993 17.34571 35-39
TAATA 1117220 0.72465616 12.545438 130-139
TGCTA 1485610 0.7196335 10.880684 50-59
AGTCT 1485425 0.7195438 19.899912 8
CACAA 1690465 0.7190405 9.608354 130-139
GCGGA 2470525 0.7095585 8.668694 220-229
TTATG 1181325 0.7066412 10.479399 50-59
TTTAT 904645 0.70276725 9.049842 240-247
CACGA 1947110 0.6979173 11.123959 180-189
GTCCT 1611565 0.69183314 7.2665515 45-49
GCTAC 1758235 0.6897003 11.523009 50-59
GGGCA 2400315 0.6893935 14.938785 150-159
TCTTC 1231495 0.6865781 39.204197 2
CCCCC 2313235 0.6848695 11.530965 80-89
ATATA 1044910 0.67775416 11.034189 130-139
GATTA 1239475 0.67748123 7.8896036 160-169
GCGAC 2237665 0.675888 8.15876 70-79
TGACT 1395000 0.6757417 5.183466 220-229
ACGCC 2104590 0.66854084 12.564535 180-189
GGCCC 2495875 0.66811234 12.434391 70-79
ATGCC 1698940 0.6664407 6.7175984 50-59
CAACG 1843290 0.6607042 14.099492 180-189
GTCTA 1357840 0.65774137 10.7940035 30-34
GTTCA 1353345 0.65556395 10.960973 160-169
GACTG 1754025 0.65424216 8.269672 1
CCTCC 1761655 0.6440684 5.1821365 140-149
CTGCG 1934790 0.6395634 14.984056 25-29
AAATC 1200360 0.6304952 9.177866 110-119
CGGAG 2191140 0.62931645 53.819645 6
GTAAC 1406895 0.6227277 9.601786 120-129
GTTCC 1443585 0.6197205 9.3085575 140-149
CCTAT 1209220 0.6160168 7.426573 110-119
AGATG 1458385 0.6138015 5.4743237 120-129
GGGTT 1579980 0.61325854 7.6100326 30-34
GGAGG 2242025 0.6122921 11.551729 6
TCAAC 1310250 0.6099179 7.8191743 110-119
TATAG 1105395 0.60419494 5.1163816 120-129
CCCTA 1464255 0.6040611 12.881954 110-119
CTGAC 1532545 0.6011692 10.04739 220-229
GGTGA 1691255 0.5998339 7.5071483 9
GACCA 1643715 0.58916914 6.0448294 170-179
GTAAT 1077575 0.58898884 6.556537 130-139
GGCAA 1716480 0.58502096 7.347946 80-89
CCGTA 1484395 0.5822815 6.458631 230-239
ACCTA 1250850 0.5822674 6.7820916 130-139
AATGG 1379070 0.5804196 8.923482 120-129
GCGCT 1739700 0.57507455 10.652256 25-29
GGGGA 2084705 0.56932837 11.456432 4
ACCCG 1789430 0.5684276 9.756107 140-149
TGCGC 1700360 0.56207025 11.2571335 25-29
TTGGA 1219680 0.561787 5.026116 60-69
AAGTA 1120845 0.5598028 7.0423536 120-129
CGCCG 2082275 0.5573971 8.461759 220-229
GAAGA 1446090 0.556136 7.612883 15-19
AAGAT 1106960 0.55286795 7.146603 15-19
TGCCA 1371675 0.53806496 5.9148817 60-69
TCAAT 931030 0.535185 8.90223 110-119
TCCGG 1607035 0.5312208 7.2459736 70-79
CTTTG 988880 0.5242279 6.487371 120-129
GACCG 1735105 0.52408946 6.7796316 220-229
TTGGT 1024960 0.5166575 7.3669405 120-129
GGTAA 1219690 0.51334006 9.545653 120-129
CACCG 1608680 0.5110108 7.792603 45-49
GGTTT 1003845 0.5060139 6.4072433 100-109
ATTAA 773930 0.50198996 6.1253757 110-119
TCTTT 726775 0.5003574 5.021728 120-129
CCACG 1537840 0.4885079 9.946936 180-189
TATCC 936325 0.47699508 5.423622 110-119
CATAG 1075940 0.47623855 6.5791683 120-129
GCCGC 1778230 0.4760084 10.068326 220-229
CCACA 1257210 0.47391674 5.0625334 170-179
CATGC 1197340 0.46967885 8.914677 60-69
TATGT 778565 0.46571955 6.2463584 140-149
TTAGC 958595 0.46434596 8.305167 45-49
GACGA 1359935 0.46350116 9.208323 220-229
TGGCC 1399075 0.46247762 16.159294 2
CCGCG 1725785 0.46196952 6.379971 220-229
CAATG 1032290 0.45691794 7.707843 120-129
CCGGC 1697130 0.45429894 5.7404356 70-79
TTTGG 897390 0.45235255 6.143288 120-129
ACGAG 1324605 0.45145977 10.240913 180-189
GGGTA 1268115 0.44975978 5.2173123 110-119
GCATG 1205800 0.44975707 9.205406 60-69
CAGTC 1131870 0.44399703 5.004766 210-219
AGCTT 916030 0.44372737 6.6668835 1
TACCT 853625 0.43486494 5.1222 2
CGCGG 1702300 0.43329337 5.960621 220-229
CGAGC 1425440 0.43055496 9.995679 180-189
ACTTC 840715 0.42828816 25.45048 4
CAATC 909330 0.42329073 6.898226 110-119
ACGAC 1170300 0.41947937 9.109459 220-229
ATCCT 821095 0.4182931 5.925906 110-119
ATACC 884130 0.41156018 5.170044 130-139
ATGGC 1099020 0.4099287 6.7884645 1
AAGTC 918505 0.4065538 5.780224 180-189
TCACG 1035930 0.4063627 5.680934 160-169
CGGTT 982780 0.40117064 8.847428 160-169
GGCAC 1299035 0.39237425 6.4026628 35-39
CATAA 745860 0.39176676 5.269219 110-119
TGACG 1041545 0.38849083 9.23961 220-229
CAAGT 865870 0.38325623 5.7517257 180-189
CGGCA 1243905 0.37572226 5.6412373 70-79
ACCCC 1106895 0.36978358 5.599964 140-149
CACTT 707105 0.3602228 5.6224427 3
AACAT 685780 0.36020944 5.199726 110-119
ATCCC 856970 0.3535329 6.0956755 110-119
TACTT 560450 0.35257152 8.451788 1
AGTCC 895405 0.35123923 5.172586 180-189
CTCGG 1061050 0.35074022 7.2191877 6
TCACA 748410 0.34838286 12.46093 5
ACATT 602395 0.34627542 5.613758 110-119
CGGTG 1101385 0.34618494 6.6601944 8
GGTCA 913995 0.3409153 5.3275814 160-169
TGGTC 832720 0.33991614 6.98005 6
TTTCT 487410 0.33556357 11.038432 4
GAGGC 1164105 0.33434212 8.164772 35-39
CCGGT 1010795 0.33412796 7.033846 160-169
GCTTA 670250 0.32467094 5.7367826 110-119
ACGAT 726955 0.32176885 6.41633 160-169
TGGGC 1007040 0.3165306 9.950068 1
CCTAA 679115 0.31612623 6.507504 110-119
CGCTT 718135 0.30829015 6.314275 1
GCGAG 1066590 0.30633488 7.149091 240-247
TATTC 479615 0.3017193 6.7093396 6
GCCTT 692860 0.29743975 8.773752 1
GAGGT 834445 0.29595092 14.764373 7
GCTTT 554890 0.29415992 6.7834535 45-49
ATTCT 465085 0.2925787 6.7151513 2
TAAGG 666840 0.28065798 5.892924 25-29
GTAAG 662945 0.27901867 6.8594165 25-29
TGCTG 678205 0.27684313 14.197885 1
TGTAA 504075 0.27552098 11.1442995 25-29
TCGGT 669790 0.27340814 8.661677 7
CCTCG 741785 0.25787455 8.28723 5
AATCT 415145 0.23863828 7.6678104 2
TTGGC 582870 0.2379274 7.9668097 1
TAACT 404360 0.23243873 5.608054 2
AACTT 394165 0.22657833 8.829854 3
CTCTT 404310 0.22540928 7.6397142 1
CGGGG 923660 0.22355138 11.366386 3
TCCTA 435665 0.22194223 7.5359 9
TTCTT 312445 0.2151067 15.269582 1
AACCT 449270 0.209134 7.7810225 2
TTCCT 368530 0.20546135 7.0021644 4
CCCTT 402970 0.18193111 5.5195546 3
TGCTT 335840 0.1780365 8.800996 1
GTCTT 310760 0.16474101 10.971634 1
GACTT 304690 0.14759265 5.6691823 3
TCGCA 355860 0.13959269 8.499727 7
TAGGC 343475 0.12811437 8.124928 1
TTGCT 155180 0.082264476 5.922484 4