FastQCFastQC Report
Thu 4 May 2017
HCGCLBCXY_s1_2_BC_X.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGCLBCXY_s1_2_BC_X.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 9604831
Filtered Sequences 0
Sequence length 50-251
%GC 53

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38561 0.40147504937879697 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 34508 0.3592775343990956 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 29635 0.30854264900652595 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28272 0.2943518735519657 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 27553 0.28686605729970677 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26980 0.28090030943803174 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26161 0.2723733504524962 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25166 0.2620139802563939 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24828 0.25849491781791895 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 23187 0.2414097655648496 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23009 0.2395565314996172 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22569 0.2349755034732001 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21905 0.22806231572424335 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21094 0.21961864815736998 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 20682 0.2153291400962703 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19671 0.2048031870628437 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19393 0.2019088102643347 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19361 0.20157564458968616 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18701 0.1947041025500605 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18433 0.19191384002487916 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18365 0.19120586296625103 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 17739 0.18468830945593942 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17694 0.18421979522596493 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17626 0.18351181816733683 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17397 0.18112760130813338 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17272 0.1798261728915376 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 16841 0.17533884771111538 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16798 0.17489115633580643 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 15765 0.16413615190105896 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15703 0.16349064340642747 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15622 0.1626473177924734 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 15584 0.16225168355382827 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15568 0.16208510071650403 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15468 0.1610439579832274 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 15369 0.16001322667728354 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14833 0.15443270162692088 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14534 0.15131968485442376 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 14525 0.15122598200842888 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 14301 0.14889382228588927 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14261 0.14847736519257862 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14045 0.1462284968887011 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13583 0.14141841746096315 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13267 0.138128406423809 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13217 0.1376078350571707 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12880 0.1340991840460285 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12815 0.1334224412693987 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 12416 0.129268281763625 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 12217 0.12719640772440452 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12150 0.1264988420931092 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11492 0.11964812290814904 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11200 0.11660798612698131 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11073 0.11528573485572 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10977 0.11428623783177444 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10840 0.11285987228718548 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10732 0.11173543813524672 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10675 0.11114198677727907 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10437 0.1086640670720807 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 10287 0.10710235297216578 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10076 0.10490554180495211 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9780 0.10182375931445332 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9745 0.1014593593578065 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 15937610 6.841589 60.09411 35-39
TGGAT 12457810 6.0616755 65.34882 35-39
TCACC 12375875 5.82648 65.423225 160-169
TCTCC 10844895 5.3531585 76.26864 20-24
CTGAG 12095940 5.192463 43.750088 15-19
AGTGG 12578020 5.155821 33.604862 100-109
TATTA 7682755 5.023941 102.64043 240-247
CTGTG 10867620 4.8912816 72.63885 25-29
TCCCT 9289060 4.585181 58.13224 10-14
TGGGT 10646145 4.575434 36.931076 100-109
CAGCC 10973380 4.3521643 57.345966 30-34
CCTGA 9679690 4.3515453 45.33338 15-19
TGTAT 7439125 4.296733 59.262993 240-247
TTCAC 8022025 4.280865 64.95097 40-44
CTCCA 8939490 4.2086525 38.17284 80-89
CCAGG 11026460 4.175925 49.52155 80-89
ATTCA 7204555 4.1564016 88.256004 40-44
AGCCT 9202960 4.1372294 46.885193 30-34
TTACT 6721145 4.0654445 92.52228 240-247
AAGGG 10223475 3.9969583 34.494957 90-99
TCTGG 8870175 3.9922748 110.84301 35-39
ATTAC 6749570 3.8939147 90.926544 240-247
TGGAG 9411355 3.857782 31.376738 90-99
TGAGA 8267090 3.836624 75.89096 15-19
GAAGG 9810475 3.8354924 29.348833 150-159
ACACG 8916790 3.8232806 48.961254 230-239
CTCTG 8052780 3.7956166 59.15162 35-39
ACCAT 7424625 3.7789197 55.113796 160-169
GCTGG 9966245 3.778803 34.696186 90-99
TCCAG 8397690 3.7752168 36.820312 80-89
CCCTG 9005385 3.7447388 72.61734 10-14
CACCT 7951180 3.743363 45.322807 40-44
CACCA 8320115 3.735986 51.5497 160-169
CTGGG 9763805 3.702046 119.90603 3
GACAC 8623620 3.697577 48.69825 230-239
TCAGT 7084295 3.6099062 83.01154 7
GGGTC 9386580 3.5590172 104.9874 8
TACTG 6907340 3.5197363 71.136955 240-247
GATTC 6827880 3.479246 48.38573 40-44
GACTC 7734755 3.4771914 45.36585 20-24
GAGAC 8414630 3.4451995 54.38168 8
TGAAG 7232165 3.356332 34.706177 150-159
TCCTG 6999860 3.2993307 57.77729 20-24
ACTAC 6421465 3.26834 27.494581 130-139
AGACT 6683620 3.2483034 55.511852 15-19
CTCCT 6541295 3.2288544 83.160164 20-24
GGACA 7843275 3.2112699 27.444555 220-229
GGTCC 8048120 3.1956959 129.1731 9
TACTA 5493925 3.1695168 26.006134 130-139
AGCTG 7375165 3.1659608 29.943514 60-69
CAAGA 6804055 3.1539748 36.696423 180-189
GAGTG 7639905 3.1316519 33.902584 90-99
GTATT 5292455 3.0568469 64.3443 240-247
ACTGG 7101350 3.0484192 36.391655 60-69
CCTGT 6439580 3.035247 53.85898 25-29
CCATC 6266660 2.950302 25.075436 170-179
CTGCA 6524305 2.9330287 34.456966 200-209
GGCTG 7709840 2.9232643 34.95979 90-99
ACCTT 5401005 2.8821871 67.721245 40-44
ACTCT 5349580 2.8547447 54.84244 20-24
CATCT 5342295 2.850857 30.727066 170-179
AGTAG 6128935 2.8443406 25.96654 50-59
CGCCA 7136170 2.830284 40.995174 70-79
GTCCC 6761920 2.8118315 69.736084 10-14
CTATG 5419865 2.7617717 27.219154 50-59
ACTGT 5419525 2.7615983 59.819134 240-247
GGATT 5600935 2.7252824 45.653957 40-44
TATCT 4465060 2.700798 43.562283 200-209
GGAGT 6575920 2.6955168 29.127092 90-99
AGACA 5810795 2.6935556 28.905304 170-179
AGGCT 6177930 2.65202 21.578238 25-29
GACAA 5694985 2.6398726 23.37072 180-189
ATCTC 4942920 2.637735 43.97375 170-179
CCTCA 5601090 2.636956 77.2404 5
GAGCT 6094040 2.616008 21.035511 60-69
GGAAG 6677275 2.61054 21.518623 80-89
AGGGC 7140935 2.5823991 33.487144 150-159
CAGGC 6810390 2.5792212 34.3935 70-79
GTGAA 5521300 2.5623467 35.960133 10-14
GCAGC 6726695 2.5475242 35.01744 30-34
AAGAA 5058525 2.5349948 29.875126 190-199
ATCTG 4959455 2.527163 35.023724 200-209
CCTTC 5105385 2.5200737 60.77384 45-49
CAGGG 6935085 2.507957 29.340353 80-89
GAACA 5395325 2.5009673 34.456978 210-219
GCCTC 5983970 2.4883342 73.78251 4
CTTCA 4647620 2.4801512 50.3868 45-49
GTCTC 5254740 2.4767816 26.480341 15-19
TGTGC 5488040 2.4700487 49.60292 25-29
TGCAA 5041175 2.4500594 32.996933 200-209
GCTAT 4780270 2.4358566 37.291134 50-59
TATGC 4713625 2.4018967 20.08968 50-59
ATCAG 4922025 2.3921514 18.078487 45-49
ACAGC 5564400 2.3858657 28.21229 210-219
CCAAG 5549720 2.379571 34.071987 180-189
ATGAA 4525160 2.3776152 25.502174 210-219
CCGCC 6411830 2.352253 35.380917 70-79
AGGGA 5991045 2.3422523 30.34038 80-89
GGGCT 6081535 2.3058758 42.652473 90-99
GTGTA 4691960 2.2829967 34.280678 230-239
TATCA 3955380 2.2819102 14.09929 170-179
GGGAA 5789460 2.2634408 25.464857 80-89
CAGTG 5269725 2.262152 69.947845 8
GCCTG 5627570 2.2345598 34.04911 210-219
TCAGC 4959560 2.229591 12.977842 45-49
GTGGA 5417385 2.220625 20.38533 100-109
AGAAC 4774615 2.2132413 29.619001 190-199
ACGGC 5814095 2.2019057 49.63589 230-239
GATGG 5331070 2.1852438 21.619545 100-109
GCTCC 5250410 2.1832952 33.45499 80-89
GCTGT 4808935 2.164398 21.318935 230-239
TTCAG 4239245 2.1601691 47.70204 45-49
CAGTA 4437965 2.1568937 20.36401 45-49
CAAAT 3898495 2.1451266 29.775173 200-209
GAGTC 4987440 2.1409743 23.64097 160-169
CTACA 4193480 2.13436 19.273928 190-199
CTCTC 4315895 2.1303728 83.56374 20-24
GGCCG 6357615 2.1266682 25.141556 230-239
GCAGA 5183700 2.1223607 23.983793 140-149
TGCAG 4909220 2.1073966 39.513615 30-34
CACTG 4687385 2.1072338 19.91705 60-69
TGAAC 4335575 2.107131 36.229225 210-219
CACGG 5545010 2.0999982 47.20207 230-239
GCCAG 5517715 2.0896611 36.849487 70-79
TCCAA 4093540 2.0834935 35.94494 180-189
GTGGT 4844070 2.0818543 23.615524 120-129
CAAGG 5079705 2.079782 17.938612 80-89
ATGGA 4473360 2.0760145 14.248793 120-129
GTATC 4073905 2.0759177 22.835611 200-209
AATGA 3938405 2.0693214 25.154104 210-219
AAATG 3933495 2.066742 27.873848 200-209
CCCTC 4711070 2.0515735 20.883224 20-24
TTCTG 3820685 2.041244 40.984642 30-34
AGCTA 4189155 2.0359695 30.07167 50-59
TGGTG 4736035 2.035424 23.346684 35-39
TCCGC 4894560 2.035321 40.160423 70-79
TGGTA 4165830 2.0269942 28.646255 120-129
AGCAC 4677945 2.0057774 19.34088 130-139
GTGGG 5509950 1.9949045 28.593697 100-109
GGGGG 6522535 1.9894152 84.404724 5
GGCTC 5001435 1.9859377 17.98049 80-89
CCTCT 3982370 1.9657413 44.378265 35-39
TTCCA 3668190 1.9574891 23.188152 180-189
GCTGA 4520385 1.9404802 23.731281 200-209
CAGCT 4292815 1.9298532 13.340888 50-59
GTAGT 3961650 1.9276452 24.47954 120-129
CTACT 3571155 1.9057076 16.740103 50-59
GGTGG 5230705 1.8938025 14.266751 40-44
AACAG 4077785 1.8902303 33.043797 210-219
CAGAG 4601665 1.8840584 30.685514 170-179
CACAG 4360825 1.8698049 16.73453 140-149
TGCAC 4152005 1.8665513 16.470499 60-69
CCTGC 4483255 1.8642867 46.45172 20-24
GCCGA 4914535 1.8612257 18.53357 220-229
GCACA 4315455 1.8503515 16.878742 130-139
CAGAC 4305290 1.8459929 26.338531 140-149
ACCAG 4288645 1.8388561 12.272849 190-199
CTCAC 3892200 1.832422 38.789932 20-24
CCGTG 4601460 1.8271183 19.849781 230-239
TGAGC 4227465 1.8147374 14.830008 200-209
ATGCA 3726285 1.8110101 18.324934 60-69
CCAGA 4218135 1.8086231 32.302544 170-179
ATACT 3130755 1.8061731 25.19376 130-139
TACAT 3128765 1.8050252 16.326479 190-199
CTGTC 3825785 1.8032546 34.61922 30-34
ATATC 3123815 1.8021693 13.902542 110-119
CTGTA 3506850 1.7869668 23.567274 190-199
GGATG 4332300 1.7758409 22.639132 100-109
TATAT 2684235 1.7552868 18.727118 110-119
CATAT 3030365 1.7482569 11.23147 170-179
GGCTT 3883485 1.747873 22.422321 25-29
GCAAA 3761325 1.7435374 30.849218 200-209
TAGTA 3111125 1.7138765 16.736135 120-129
TGGGG 4710120 1.7053221 104.199005 4
TGGGA 4149885 1.7010677 16.636667 100-109
AGCAG 4102020 1.6794887 13.214018 50-59
ACAAC 3437305 1.6686174 15.749204 180-189
AGAGA 3737190 1.6541975 24.121521 170-179
TCTGC 3509515 1.6541831 32.65481 200-209
CTCAG 3675390 1.652287 73.42638 6
AACTA 3002530 1.6521262 27.396456 130-139
CCTGG 4160560 1.6520485 33.0423 2
GGATC 3831370 1.6447045 13.438366 70-79
GGGGC 5142270 1.6425256 29.777504 90-99
GGTCT 3641885 1.6391339 33.37593 15-19
ACCCT 3465670 1.6316144 31.054604 10-14
AGGAC 3971385 1.626003 20.85332 220-229
GTGCA 3778635 1.6220667 44.93724 25-29
GTCAC 3600590 1.6186603 33.589172 160-169
GAGGA 4138550 1.6180029 27.08619 220-229
CAGTT 3170720 1.6156869 16.725437 190-199
TCTGT 3018905 1.6128842 15.339697 210-219
AACAC 3316020 1.6097403 23.39389 190-199
CGATT 3158110 1.6092614 34.423958 160-169
GGGCC 4807080 1.6080031 30.608501 2
ACTAT 2783380 1.6057681 14.499316 130-139
GGAGC 4385870 1.5860763 15.508971 200-209
GAGCA 3871375 1.585056 8.593961 200-209
CTTCT 2824745 1.5804517 22.446833 30-34
AGGGG 4558970 1.5742972 32.22864 90-99
AGAGT 3389155 1.5728525 23.375332 150-159
CTTTA 2597760 1.5713168 31.292902 45-49
ATCAT 2708910 1.5628054 19.11448 110-119
TACGC 3473370 1.561468 24.265764 140-149
GCAAG 3799425 1.5555974 17.248909 25-29
AGTTA 2811510 1.5488226 10.579837 50-59
TCCAT 2891630 1.5430866 16.676659 45-49
CATGA 3165540 1.5384829 15.471595 60-69
CTGGT 3412475 1.5358815 21.68067 35-39
TCTCA 2872030 1.5326271 18.75042 100-109
CGCTG 3848680 1.5282093 16.073015 190-199
CTGAA 3128750 1.5206026 16.218874 200-209
GTCCG 3814805 1.5147583 32.56403 70-79
ACAAT 2734050 1.5043968 22.314592 180-189
TAGTG 3083130 1.5001781 21.89537 120-129
GCACT 3331520 1.497699 18.651768 60-69
CTATT 2466080 1.4916673 13.097093 110-119
AGTCA 3058600 1.4865088 22.516659 160-169
GCCGT 3740680 1.4853252 27.261866 230-239
TCTGA 2910620 1.483149 21.079596 220-229
CAGCA 3418555 1.4657848 15.499472 45-49
TCTAT 2408970 1.4571228 10.70539 110-119
CTACG 3223075 1.4489468 16.033846 130-139
GGCAG 4003770 1.4478961 13.805644 150-159
TCTCT 2581450 1.4443276 19.45888 35-39
ACAGA 3102425 1.4381087 20.644806 140-149
AAGGC 3508740 1.4365823 29.801973 25-29
TGACC 3194985 1.4363189 8.614351 160-169
CATCA 2800235 1.4252386 20.21526 45-49
AAGCT 2905100 1.4119065 12.120302 200-209
ACCTG 3140165 1.4116745 21.913395 25-29
GTTAC 2760430 1.4066175 10.313048 50-59
GGCCT 3522830 1.3988228 69.99052 3
CGTCC 3355505 1.3953307 13.924401 180-189
ACTCC 2950510 1.3890805 16.359869 140-149
ATTGG 2854005 1.3886914 11.4017 100-109
AGTGA 2983330 1.3845156 75.32702 9
TGGAA 2977480 1.3818008 19.909285 120-129
AGTTC 2673730 1.3624382 14.141031 190-199
GGGTG 3705870 1.3417284 15.365571 60-69
TTCTC 2386765 1.3354008 12.653156 190-199
CCATG 2963105 1.3320763 12.33558 160-169
GAAGT 2864330 1.3292896 13.480113 140-149
GTGGC 3500870 1.3273904 12.733756 100-109
AGGCC 3502905 1.3266152 15.390659 2
GCTTC 2809165 1.3240786 18.597748 2
TGTGA 2717980 1.3225048 10.972399 150-159
TACCA 2596310 1.3214468 11.906776 45-49
AGAGC 3211815 1.3150125 27.608934 220-229
TAGCA 2687590 1.3061944 10.439576 130-139
ATGGT 2683500 1.3057276 9.073514 120-129
TGTCT 2425590 1.2958989 31.423931 30-34
ACGCA 3019000 1.2944663 20.523935 140-149
AAGAG 2918595 1.2918617 13.135444 150-159
GTAGC 2993875 1.2851903 15.489514 50-59
CCATA 2524150 1.2847192 9.694274 160-169
CCTTT 2291670 1.282195 32.84127 45-49
TCCGT 2713400 1.2789404 13.648896 150-159
CAGAA 2753565 1.2763969 18.988455 140-149
GTTCT 2388170 1.2759068 14.332015 190-199
ATGAT 2307375 1.2711015 12.257197 120-129
GTGCG 3344140 1.2679647 16.541733 240-247
GTTAT 2195125 1.267873 13.469366 110-119
TACAA 2300645 1.2659178 12.212128 140-149
CCTAC 2686745 1.2649018 18.819477 190-199
CGGCT 3175910 1.26107 25.45821 230-239
CAATT 2171530 1.2527839 23.69829 180-189
TGGTT 2442260 1.2459407 7.744057 50-59
TTAGT 2152170 1.2430629 19.142405 110-119
CGGCC 3537695 1.2392935 29.839317 230-239
TGAGT 2543425 1.2375704 19.116207 90-99
GGGGT 3404240 1.2325219 96.68799 7
AATTC 2119530 1.2227843 23.685177 180-189
ACGCT 2713560 1.2198924 18.454445 190-199
CAACC 2712490 1.217991 13.030023 140-149
CTCAA 2386735 1.2147791 14.960543 150-159
GAAGC 2962330 1.212866 10.478483 200-209
TGATG 2477100 1.2052983 14.583387 120-129
TGCGA 2794810 1.1997371 12.44047 240-247
TTGAG 2454130 1.1941217 18.986782 90-99
CCGAT 2641700 1.1875873 24.564013 160-169
AACCA 2442535 1.1857127 14.256716 190-199
CGACA 2757740 1.182445 15.620114 70-79
TTACA 2047660 1.1813216 7.977662 35-39
CGTGT 2622930 1.1805242 21.334728 230-239
TCATA 2029885 1.171067 10.674362 110-119
ATACA 2123590 1.1684941 18.208504 35-39
ACACA 2401770 1.1659236 6.751906 130-139
AGGTC 2715775 1.1658095 19.355387 10-14
AACCC 2577340 1.1573044 15.044556 140-149
GCAGT 2695885 1.1572713 7.4523826 50-59
CGTGA 2687615 1.1537211 21.222975 150-159
CTTGA 2260990 1.1521206 19.918474 90-99
TCAAG 2369555 1.1516265 16.325058 150-159
ATAAA 1927960 1.1468766 12.283749 130-139
GAGAG 2921600 1.1422255 26.96972 220-229
GCCCC 3109040 1.140587 11.779693 70-79
GCACC 2863460 1.13568 10.761755 130-139
GATTG 2333665 1.1355062 14.098488 100-109
CTCCC 2588960 1.1274384 9.472207 200-209
GCTTG 2487955 1.1197749 16.889042 90-99
TGTGT 2187120 1.1157787 16.305143 240-247
TTATA 1704285 1.1144735 16.13586 110-119
ATATT 1700115 1.1117465 16.12688 240-247
GTCCA 2467990 1.1094953 21.8739 180-189
ACATA 2015125 1.108812 15.999889 130-139
AGAAG 2501815 1.1073817 16.618233 140-149
ATTAG 2006455 1.1053288 19.600365 110-119
ACCAA 2273785 1.1037941 12.698021 130-139
ACTCA 2162930 1.1008688 11.950791 190-199
GAACT 2263760 1.1002091 12.619766 190-199
ATGGG 2681930 1.0993423 19.812086 100-109
TACAG 2261850 1.0992808 8.545013 120-129
TGGCA 2553475 1.0961385 9.658775 100-109
AAACT 1987665 1.0937022 15.903361 130-139
CAACT 2139725 1.0890583 11.9252405 130-139
AAGGT 2342155 1.0869566 19.154362 15-19
AAATA 1826370 1.0864443 17.587397 130-139
CTCCG 2610530 1.0855453 11.085174 150-159
TATGG 2229820 1.0849777 10.447214 35-39
TTTAT 1571725 1.0776024 7.24225 240-247
TCACT 2012785 1.0741006 12.513693 190-199
TTATG 1850855 1.0690274 8.744638 50-59
GTGAC 2483005 1.0658876 8.8710165 210-219
TGGAC 2472295 1.06129 14.674746 80-89
TCCTT 1894075 1.0597396 7.818249 45-49
CACGT 2357160 1.0596713 12.676462 180-189
CGCAG 2796165 1.0589596 16.622389 140-149
ACAAG 2277370 1.0556599 15.581018 80-89
TTACC 1970335 1.0514475 10.564262 45-49
TTATT 1531015 1.0496907 10.772234 240-247
ACATG 2157235 1.0484369 13.655897 190-199
TGAGG 2549430 1.0450296 14.412237 220-229
ACACC 2327145 1.0449593 13.426377 40-44
ATCAA 1897070 1.0438528 10.089309 110-119
ATCCG 2319900 1.0429207 16.125673 70-79
ATTCC 1952500 1.0419302 22.904106 180-189
AATCA 1887775 1.0387381 11.425336 110-119
CCAGC 2613325 1.0364736 6.5300407 45-49
AGATC 2128520 1.0344812 12.995413 210-219
TCATC 1930555 1.0302194 10.598199 110-119
AGACC 2387135 1.0235395 68.98161 9
ATGAG 2189985 1.016337 15.136197 60-69
GATCT 1994465 1.0163088 10.188945 220-229
AAGCA 2189780 1.015058 7.3099957 120-129
AGCTC 2256430 1.0143876 11.451279 210-219
ATCTA 1752645 1.0111237 12.603801 110-119
GGGAG 2925855 1.0103523 21.450731 5
CCGTC 2419635 1.0061648 10.65913 140-149
TATGA 1825070 1.0054063 6.826892 120-129
GCCAA 2338680 1.0027633 13.6079445 180-189
CCAGT 2229875 1.0024496 14.428105 190-199
ACAAA 1890915 0.9923697 11.8834305 130-139
TTGGG 2308385 0.9920835 8.983653 100-109
GATAC 2036210 0.98961765 20.634996 35-39
AGCAA 2131290 0.9879453 5.2287803 120-129
GACCC 2486625 0.986223 33.381298 10-14
GAGAT 2122555 0.9850437 12.519103 210-219
CTTCG 2088630 0.9844598 65.28494 3
GGTTA 2014565 0.9802397 6.913075 50-59
TGTCC 2054710 0.9684719 36.960163 15-19
CCCCT 2219115 0.9663786 9.743117 70-79
ACAGT 1984980 0.96471936 8.779987 120-129
CACAT 1888280 0.96108 10.496456 130-139
TTTCT 1511365 0.9584921 7.2481437 4
AAGTT 1738630 0.95778763 16.023453 140-149
CATTA 1651700 0.95288724 10.541906 110-119
ACAGG 2323370 0.9512567 14.841303 70-79
ACGTC 2112465 0.94966763 14.028063 180-189
CATAC 1860060 0.9467168 11.198502 130-139
CTATC 1769525 0.9442876 8.517697 110-119
TAGAC 1936910 0.94135684 10.65118 170-179
AATAC 1708965 0.9403489 14.688505 130-139
GTTTC 1752480 0.9362822 5.8068056 100-109
GACAG 2282630 0.9345764 15.02374 70-79
ATTAT 1425875 0.9324145 5.0003242 50-59
TTTAG 1613420 0.93188846 18.750763 45-49
GAGCC 2459750 0.931553 17.94005 220-229
ATCCA 1824505 0.9286203 10.507146 180-189
AACGC 2163655 0.92771727 13.404595 180-189
AATAA 1558285 0.9269697 11.606948 130-139
GGTGC 2440595 0.9253764 12.179862 60-69
CATGG 2153755 0.92454934 9.374603 200-209
ATATG 1677245 0.9239715 6.3376684 110-119
TTTCA 1526720 0.9234729 6.7227874 100-109
TCGGA 2142620 0.91976935 56.815834 5
CCCCC 2390465 0.91840166 11.274475 80-89
GCTCT 1947435 0.91790867 14.003679 210-219
GATCC 2038750 0.9165286 16.024858 70-79
ATGCT 1797405 0.915894 10.045075 50-59
CATCC 1937755 0.9122822 7.6053057 110-119
AGCCG 2406870 0.91152626 18.503942 220-229
CCAAC 2029075 0.9111166 10.662346 130-139
GGTAG 2212955 0.90710616 10.877466 120-129
ACCGC 2283835 0.90579426 9.187783 220-229
AACTG 1863205 0.90553546 10.078299 60-69
TAGCT 1776335 0.90515745 17.130535 50-59
TCAAC 1773530 0.9026755 6.8430147 110-119
TAACA 1634140 0.89917684 8.22781 120-129
GCCTA 1995535 0.8971012 18.041752 190-199
TGGCT 1991980 0.89654726 21.013197 40-44
AGTCG 2079810 0.8928067 9.220428 150-159
GGTAT 1831195 0.8910162 5.820261 110-119
AGTAA 1686635 0.8861939 5.028468 130-139
CAAAC 1823180 0.88505083 14.196428 130-139
TAAAT 1417810 0.8842827 12.612956 130-139
TAGTT 1528650 0.8829265 9.519713 50-59
GTAGA 1896725 0.88023967 11.931819 170-179
TTTAC 1449770 0.87692785 12.658206 45-49
TTGGT 1711425 0.8730987 6.198207 120-129
CGGAC 2291480 0.86782604 9.454031 220-229
CCGAG 2288980 0.86687917 17.95478 220-229
AGGCA 2114840 0.86587834 9.48607 80-89
CACGC 2180220 0.8646994 16.444704 190-199
TTCGG 1913745 0.8613354 62.333935 4
GAACC 2007415 0.86072576 9.735968 190-199
GCCAT 1906745 0.8571853 5.4419847 60-69
ATGAC 1760480 0.8556102 9.093001 160-169
GATGA 1842735 0.8551838 5.5151014 60-69
CGAGG 2362575 0.85438555 13.211348 220-229
GAAAT 1617100 0.8496587 6.692527 110-119
TACAC 1656435 0.84307754 20.281733 35-39
GATCA 1729350 0.8404806 9.461433 110-119
CGTAT 1642435 0.8369268 6.166629 240-247
AGCCC 2097580 0.8319234 9.77057 80-89
GGACT 1932580 0.8296048 6.8168716 140-149
ACGCC 2091145 0.8293713 12.521378 180-189
TAATA 1326650 0.82742655 9.300369 130-139
GATTA 1477705 0.8140476 6.2354946 160-169
TCGAG 1890975 0.8117449 9.382197 160-169
ATGCC 1798445 0.8084985 5.9359045 50-59
GACCA 1869675 0.8016665 5.56466 170-179
CAACG 1865045 0.7996813 13.427165 180-189
TCTTC 1426615 0.7981945 28.38526 2
TGCTA 1548995 0.7893131 8.570519 50-59
CTATA 1365310 0.78766507 10.45874 50-59
GCGAC 2072420 0.78486395 7.620001 70-79
ATAGT 1416550 0.78035814 12.020889 120-129
GGATA 1679270 0.77932227 14.042378 35-39
GTCGA 1814765 0.77903 9.290008 160-169
GGGAT 1893825 0.77629244 13.334684 100-109
GCTAC 1718465 0.77254313 9.933548 50-59
CCCCA 1850980 0.76880246 12.388235 80-89
AACTC 1506795 0.766915 13.664598 190-199
AAATC 1387040 0.7632115 7.1247 110-119
CTGAC 1697630 0.7631767 8.329015 220-229
GGTTC 1685380 0.7585532 7.549591 160-169
CCCAG 1885615 0.7478558 10.726626 80-89
ATCTT 1233245 0.7459576 7.634894 3
CGAGT 1727910 0.7417455 12.238848 160-169
GTATA 1340555 0.73849356 7.164554 240-247
GGGAC 2037355 0.7367752 5.9627666 90-99
GTTCA 1441665 0.7346215 8.767992 160-169
GACTG 1704870 0.73185503 7.9561033 1
CTGCG 1833620 0.72808206 13.725931 25-29
TTTGG 1422985 0.7259484 5.1591616 120-129
GGAGG 2099540 0.7250103 11.61235 6
GGAGA 1851860 0.7240011 51.704876 7
CTTTG 1346965 0.71963125 5.251701 120-129
CACGA 1674325 0.7179057 9.824914 180-189
TATAC 1237570 0.71397024 8.919494 130-139
TCCAC 1514130 0.7128424 11.192188 180-189
GCGGA 1959240 0.70852625 7.623366 220-229
TGCTG 1557975 0.701211 11.982251 1
GGGCA 1930275 0.6980515 13.971111 150-159
CGCCG 1985515 0.6955478 7.977423 220-229
AGCTT 1364290 0.6951939 5.107561 45-49
GTCTA 1353660 0.68977726 8.281065 30-34
CACAA 1396385 0.677866 8.019382 130-139
GGTTT 1324905 0.6759121 5.587255 100-109
TTCTT 1060800 0.6727484 11.471047 1
GTCTG 1491280 0.671193 14.40417 3
AGTCT 1308005 0.666513 14.637513 8
TGCCA 1479720 0.6652143 5.295399 60-69
GGCAA 1617605 0.6622955 6.694072 80-89
GGCCC 1875030 0.65684366 11.95015 70-79
GTAAC 1343895 0.65314585 7.7475576 120-129
GCCGC 1859065 0.65125096 9.302612 220-229
CCCGT 1564650 0.6506336 10.652525 140-149
GCGCT 1634930 0.6491875 9.669015 25-29
GGTAA 1395675 0.6477104 7.849509 120-129
TGCGC 1625160 0.64530814 10.272705 25-29
TGACG 1492595 0.64073104 7.7528405 220-229
GTCCT 1359020 0.6405637 5.7269526 45-49
CCCTA 1358580 0.6396104 11.355732 110-119
GTTCC 1348030 0.63538367 7.7549987 140-149
CAATC 1245790 0.6340711 5.6692343 110-119
AATGG 1364150 0.6330801 7.1765 120-129
CGGAG 1747710 0.63202995 47.999264 6
GCTTT 1179745 0.6302921 5.09352 45-49
AAGAT 1193230 0.6269484 5.1933594 15-19
TGCTT 1167980 0.6240065 6.955257 1
GGTGA 1494315 0.6125304 7.3435016 9
ACTTC 1147100 0.6121373 19.46348 4
TCAAT 1050240 0.6058971 6.533956 110-119
GGGTT 1404690 0.60369897 5.8712687 30-34
ATATA 963870 0.6011621 8.895464 130-139
ACATT 1037790 0.59871453 5.09843 110-119
TGGTC 1330180 0.5986854 5.184321 6
GAAGA 1351570 0.59824723 6.056237 15-19
CATGC 1310070 0.5889475 7.867664 60-69
GACGA 1427400 0.5844199 7.978013 220-229
GGGGA 1685000 0.581862 10.109087 4
AAGTA 1081865 0.56843483 5.8660746 120-129
ATGGC 1303310 0.5594761 6.7737737 1
CCTAT 1044565 0.5574207 5.931933 110-119
ACCTA 1094085 0.5568577 5.32363 130-139
CGGCA 1457965 0.5521584 5.5257096 70-79
CTCTT 982505 0.5497139 5.7602596 1
GACCG 1443790 0.54679 6.1598344 220-229
AATCT 945460 0.5454481 5.421752 2
TTAGC 1067115 0.54376405 6.371959 45-49
TCACG 1196275 0.5377904 5.106521 160-169
TCCGG 1353960 0.53762174 6.4985194 70-79
GCATG 1246785 0.53521144 8.213934 60-69
CCGTA 1178685 0.5298828 5.258549 230-239
GAGGC 1443570 0.5220429 7.888811 35-39
TGGCC 1313815 0.52168125 15.237438 2
CAATG 1072240 0.52111894 6.026571 120-129
ACGAC 1214475 0.5207343 7.857553 220-229
ACCCG 1288485 0.51102746 8.646232 140-149
CACCG 1277835 0.5068035 7.2503347 45-49
CCACG 1268735 0.50319433 9.0884075 180-189
CGAGC 1306220 0.49468976 9.157957 180-189
CATAG 1017235 0.494386 5.4467354 120-129
CGGTT 1096900 0.49369106 7.4770837 160-169
CCGCG 1388265 0.48632452 5.84634 220-229
GGCAC 1266010 0.4794615 5.9225264 35-39
ACGAG 1168790 0.47853735 9.010042 180-189
TACTT 771100 0.4664182 6.8389525 1
CCGGC 1321155 0.4628151 5.6380377 70-79
CGCGG 1371720 0.45885026 5.4770923 220-229
ATTCT 740145 0.44769433 5.16775 2
TTGGC 974695 0.43868923 6.803191 1
CCTAA 859885 0.4376566 5.6497884 110-119
GCCTT 912830 0.43025553 6.548597 1
AACTT 725205 0.41838017 6.7005777 3
TCACA 777345 0.39564613 9.167372 5
ATCCC 834870 0.39305127 5.301087 110-119
GCGAG 1041985 0.37681636 6.7254634 240-247
CTCGG 934415 0.37103152 7.2708807 6
GAGGT 874690 0.3585417 13.541833 7
AACCT 701135 0.35685745 5.732733 2
CGGTG 928915 0.35220757 6.745049 8
ACGAT 719320 0.34959644 5.4207344 160-169
CCGGT 864015 0.3430775 6.374837 160-169
GTCTT 638535 0.34114453 7.6278696 1
GTAAG 714235 0.33146504 5.10034 25-29
TGGGC 857325 0.3250635 8.960306 1
TCGGT 687545 0.3094492 8.060845 7
CCTCG 681785 0.2835089 7.924693 5
TCCTA 510030 0.27217188 5.322139 9
TGTAA 449150 0.24743064 7.6581316 25-29
CGGGG 771220 0.24634033 10.418438 3
TCGCA 534940 0.24048452 5.837085 7
TAGGC 422865 0.18152462 6.9578786 1