FastQCFastQC Report
Thu 4 May 2017
HCGCLBCXY_s2_2_illumina12index_17_SL248364.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGCLBCXY_s2_2_illumina12index_17_SL248364.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 6293918
Filtered Sequences 0
Sequence length 50-251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 28739 0.4566154182498088 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26411 0.4196273291135982 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25989 0.41292244353993807 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24486 0.38904224681668875 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23854 0.37900080681063847 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22550 0.35828239262093975 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20955 0.3329404672892148 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20685 0.32865061159042747 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 20121 0.31968957968629397 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20116 0.3196101379140942 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19562 0.31080798955436023 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19137 0.30405543891738024 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18255 0.29004191030134174 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16398 0.26053723610634905 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16280 0.2586624102824346 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16186 0.257168904965079 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15547 0.247016246477949 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 15215 0.2417413128038846 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15049 0.23910384596685244 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14819 0.23544952444566328 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14766 0.23460744166034575 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 14594 0.23187464469667385 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 14567 0.23144565912679513 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14524 0.23076245988587715 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14480 0.2300633722905192 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 14461 0.22976149355616007 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14315 0.22744179380792695 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 14272 0.22675859456700898 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13987 0.22223041355162237 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13669 0.21717791683971732 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13535 0.2150488773447636 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13486 0.21427034797720595 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13237 0.21031414772165763 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13190 0.20956739506297986 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13061 0.2075177973402259 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 12649 0.20097179531096526 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 12556 0.19949417834804967 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12048 0.19142289429255355 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 11865 0.18851532543004215 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 10982 0.17448590845956366 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10775 0.1711970190904934 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10499 0.16681183326506638 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 10437 0.16582675528978927 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 10309 0.1637930459214753 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 9990 0.1587246608551303 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 9934 0.15783491300649294 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 9870 0.15681805832233595 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 9826 0.15611897072697803 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9818 0.1559918638914584 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9596 0.15246464920578884 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 9583 0.15225810059806943 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9463 0.15035149806527506 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9404 0.14941408515331786 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9288 0.1475710360382833 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8919 0.14170823324994064 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8832 0.14032594641366475 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 8792 0.13969041223606662 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8609 0.13678284337355523 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8591 0.1364968529936361 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8501 0.13506690109404032 No Hit
GTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 8125 0.12909287982461798 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8044 0.12780592311498182 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 7941 0.12616942260766664 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 7807 0.12404038311271293 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 7794 0.12383383450499355 No Hit
TTCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAC 7687 0.1221337805799186 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7641 0.12140291627568076 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 7424 0.11795514336221094 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 7412 0.1177644831089315 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 7362 0.11697006538693386 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 6988 0.11102782082639145 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGA 6983 0.11094837905419168 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 6818 0.10832680057159944 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6734 0.10699217879864338 No Hit
GGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 6619 0.1051650180380488 No Hit
TGCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAC 6613 0.10506968791140908 No Hit
CGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 6569 0.10437060031605115 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 6493 0.10316308537861472 No Hit
AGGGCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 6454 0.10254343955545654 No Hit
AACTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 6373 0.10125648284582037 No Hit
GTCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAC 6364 0.1011134876558608 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 12462055 7.8239393 69.28528 35-39
TGGAT 9478195 7.358176 82.25052 35-39
TATTA 5920080 7.049052 151.35928 240-247
TCACC 9636630 6.641603 75.81093 160-169
TCTCC 8430105 6.358454 91.368095 20-24
TGTAT 6080665 6.1158986 84.96965 240-247
CTGAG 9643145 6.054168 51.487637 15-19
CTGTG 8758395 6.017709 86.931244 25-29
AGTGG 9797945 5.8710375 39.56561 100-109
TCCCT 7373145 5.561236 68.834435 10-14
TGGGT 8282665 5.431512 44.161354 100-109
TTACT 5078925 5.3522577 129.75363 240-247
TTCAC 6188300 5.273851 80.70887 40-44
ATTAC 5361055 5.1623173 122.535774 240-247
CCTGA 7533325 4.955397 52.874233 15-19
ATTCA 5090415 4.90171 116.32307 40-44
AGCCT 7192630 4.7312894 55.70638 210-219
CTCCA 6836610 4.711818 43.97584 80-89
CAGCC 8651235 4.6021543 60.41516 30-34
TGAGA 6352470 4.5062613 91.26978 15-19
TCTGG 6533935 4.489329 133.76819 35-39
CTCTG 6233420 4.48734 72.49145 35-39
ACACG 7380205 4.4359784 55.87172 230-239
CCAGG 8727855 4.4313354 52.379604 80-89
AAGGG 8062605 4.414529 39.100452 90-99
TGGAG 7334735 4.395055 35.538044 90-99
GACAC 7105280 4.2707305 55.669796 230-239
TCCAG 6476550 4.260254 42.405796 80-89
TACTG 5223010 4.2483606 91.917244 240-247
ACCAT 5455335 4.2482214 66.20902 160-169
TCAGT 5200515 4.230063 105.926 7
CACCT 6111060 4.211767 52.25126 40-44
GAAGG 7514270 4.1142983 32.02376 150-159
GATTC 5045005 4.1035724 62.836727 40-44
TACTA 4259885 4.1019683 33.288765 130-139
GTATT 4078155 4.1017857 91.717026 240-247
CCCTG 6944610 4.042981 78.99094 10-14
CACCA 6418275 4.0419908 56.887394 160-169
TGAAG 5645405 4.0046887 41.310753 150-159
CTGGG 7506080 3.9806597 127.925285 3
ACTAC 5051835 3.9340043 33.563328 130-139
GCTGG 7263335 3.851926 37.67414 90-99
GACTC 5751920 3.7835946 53.49177 20-24
TCCTG 5226155 3.7622259 69.39746 20-24
AGACT 5045365 3.7499223 66.01291 15-19
GAGAC 6534395 3.7486112 59.614006 8
GGGTC 7064860 3.7466698 111.61897 8
GGACA 6480800 3.7178648 31.574425 220-229
CTCCT 4876030 3.677773 99.41678 20-24
TATCT 3440010 3.6251411 60.321423 200-209
AGCTG 5760975 3.6168606 35.293674 60-69
GAGTG 5937285 3.557686 39.418407 90-99
GGTCC 6251565 3.4736547 138.78477 9
CAAGA 5108530 3.469404 42.096706 180-189
ACTGT 4243770 3.451853 77.413 240-247
CCTGT 4777955 3.4395735 65.98231 25-29
CATCT 3995470 3.4050567 39.829746 170-179
CCATC 4898585 3.3761244 30.197744 170-179
ACTGG 5375230 3.3746817 42.13481 60-69
ACTCT 3945905 3.3628159 70.56424 20-24
CTATG 4091030 3.3276157 35.63942 50-59
ACCTT 3848340 3.2796683 85.775604 40-44
CTGCA 4979720 3.2756443 39.94213 200-209
AGTAG 4577500 3.2471476 30.907713 50-59
GGATT 4080470 3.1677773 59.16895 40-44
GGCTG 5927515 3.1435077 38.273293 90-99
AGACA 4542230 3.0848072 33.78374 180-189
ATCTG 3785365 3.07899 44.037468 200-209
ATCTC 3598720 3.0669348 55.421135 170-179
GTCCC 5239635 3.0503867 76.910164 10-14
GTGAA 4293280 3.0455306 45.114685 10-14
GGAGT 5033445 3.0160956 33.19224 90-99
GACAA 4430250 3.008757 27.427235 180-189
GAGCT 4778820 3.0002432 24.58504 60-69
GTGTA 3845470 2.9853408 44.47133 230-239
CCTCA 4240165 2.9223382 90.26537 5
GCTAT 3579050 2.9111748 48.869946 50-59
GTCTC 3999750 2.8793564 32.10606 15-19
TGTGC 4178610 2.8710346 58.665558 25-29
CTTCA 3355125 2.859336 64.1057 45-49
AAGAA 3677990 2.8223271 37.2363 190-199
TATGC 3462890 2.816691 26.1148 50-59
CCTTC 3712655 2.8002908 74.214966 45-49
AGGCT 4436685 2.7854435 25.085514 25-29
TGCAA 3722135 2.7664437 39.695633 200-209
AGGGC 5678985 2.751958 35.5193 150-159
GAACA 4040130 2.7438111 39.8109 210-219
GGAAG 5000160 2.7377446 22.93264 80-89
CGCCA 5089285 2.7073214 43.873108 70-79
ATGAA 3189115 2.678168 33.11923 210-219
CAGGC 5231690 2.6562507 37.008987 70-79
TATCA 2753535 2.6514597 18.991926 170-179
ACAGC 4401615 2.645654 31.578651 210-219
GCTGT 3820595 2.6250503 26.714497 230-239
CAGGG 5278915 2.5580897 30.340458 80-89
ATCAG 3441090 2.5575595 20.43585 45-49
AGGGA 4660535 2.5517888 33.269363 80-89
CAGTG 4034265 2.532796 81.92407 8
GCAGC 4978185 2.5275404 37.307476 30-34
CCAAG 4190945 2.5190277 37.299294 180-189
CTACA 3224610 2.5110934 24.372055 190-199
GCCTC 4291575 2.4984496 83.574326 4
GGGCT 4699745 2.4923909 47.12459 90-99
GTATC 3060810 2.489642 29.563692 200-209
GCCTG 4455745 2.475815 38.77868 210-219
AGAAC 3636790 2.4698873 35.666138 190-199
GTGGA 4115015 2.4657626 23.792112 100-109
CAAAT 2792930 2.4574442 36.98042 200-209
GGGAA 4442195 2.4322412 27.39427 80-89
TATAT 2038890 2.4277105 27.541792 110-119
CTCTC 3191960 2.4075537 99.95632 20-24
TCCAA 3084445 2.4019432 44.11761 180-189
GAGTC 3813885 2.3944368 28.223024 160-169
AGCTA 3194090 2.3739789 37.111805 50-59
TGAAC 3180810 2.3641088 44.01079 210-219
AATGA 2812460 2.361859 32.674614 210-219
TTCAG 2902120 2.3605647 60.98305 45-49
CACTG 3578750 2.3540905 23.569427 60-69
CACGG 4614565 2.3429222 51.533367 230-239
GTGGT 3569375 2.3406842 28.181154 120-129
TTCCA 2729755 2.3263774 29.634962 180-189
ACGGC 4569990 2.3202903 53.86665 230-239
ATGGA 3257525 2.3107953 17.037342 120-129
CCGCC 4905135 2.3093836 36.11497 70-79
GTAGT 2973140 2.308128 30.44734 120-129
GCTCC 3952285 2.300923 36.7229 80-89
TCAGC 3494360 2.2985787 14.308302 45-49
AAATG 2720970 2.2850273 34.555794 200-209
TACAT 2370755 2.2828696 22.303425 190-199
GATGG 3777000 2.2632203 24.990698 100-109
CAGTA 3041765 2.2607648 23.081291 45-49
CCCTC 3682955 2.2464993 24.255817 20-24
TGCAG 3544325 2.2252014 45.813324 30-34
GCAGA 3866755 2.218256 26.59318 140-149
CCTCT 2930620 2.2104366 54.163876 35-39
TGGTA 2824225 2.192521 36.235054 120-129
GTGGG 4329500 2.19141 31.09929 100-109
TCCGC 3749435 2.1828287 44.690586 70-79
CATAT 2252550 2.1690464 15.557716 170-179
CTGTA 2665635 2.168209 29.452387 190-199
CAAGG 3775340 2.1658137 19.896757 80-89
TGGTG 3299910 2.1639771 28.57982 35-39
CTACT 2531915 2.157772 21.28448 50-59
GGCCG 5017780 2.1520123 25.76346 230-239
ATACT 2218310 2.136076 32.418873 130-139
CACAG 3524985 2.118743 18.934345 140-149
AGCAC 3519150 2.1152356 21.550392 130-139
ATATC 2189645 2.1084733 18.670198 110-119
CAGAG 3674090 2.107729 33.870903 170-179
TGCAC 3176290 2.0893536 19.67052 60-69
CTCAC 3004210 2.0705135 45.717297 20-24
CCGTG 3705385 2.0588808 22.380285 230-239
TAGTA 2231875 2.0512016 21.604101 120-129
GCCAG 4034500 2.0484097 39.532623 70-79
GGCTC 3683375 2.0466511 20.120045 80-89
CTGTC 2836640 2.042052 42.15793 30-34
CAGCT 3092590 2.0342958 15.753784 50-59
GCTGA 3221000 2.0222113 28.273767 200-209
ATGCA 2718880 2.0207834 22.886553 60-69
GCACA 3348425 2.0126188 18.703314 130-139
CAGAC 3323295 1.997514 29.232548 140-149
AACAG 2918755 1.9822414 38.25863 210-219
GGTGG 3888425 1.9681565 17.039791 40-44
TGAGC 3112260 1.9539421 17.753164 200-209
GGATC 3092650 1.9416304 16.308197 70-79
AACTA 2202390 1.9378395 35.043747 130-139
CCTGC 3310115 1.9270674 51.811226 20-24
CAGTT 2364025 1.9228817 21.541565 190-199
AGTTA 2088430 1.9193683 13.497496 50-59
GGGGG 4894065 1.9120134 82.43753 5
TGGGA 3178010 1.9042989 19.726753 100-109
AGAGT 2675955 1.898246 29.026241 150-159
GCAAA 2776650 1.8857323 35.633633 200-209
GGATG 3143035 1.883341 26.247583 100-109
GGCTT 2737260 1.8807137 27.186987 25-29
CCAGA 3114130 1.8717926 35.570393 170-179
TCTGT 2101755 1.8709121 20.177027 210-219
CGATT 2284080 1.857855 43.213932 160-169
AGGAC 3230270 1.8531213 23.680336 220-229
GAGGA 3383700 1.8526818 30.93765 220-229
GGTCT 2683560 1.8438175 41.35837 15-19
ACAAC 2558260 1.8203695 17.389376 180-189
GCCGA 3572000 1.8135875 19.532341 220-229
TCTAT 1720695 1.8132977 14.070947 110-119
TTCTG 2030555 1.8075322 54.52023 30-34
CCTGG 3244360 1.8027141 33.248837 6
TGGGG 3549245 1.7964779 111.86746 4
ACTAT 1864575 1.7954538 17.931795 130-139
AGAGA 2744095 1.7786971 27.232347 170-179
AACAC 2499225 1.7783623 27.403296 190-199
ATCAT 1846460 1.7780105 26.117304 110-119
GTGCA 2830100 1.7767961 50.79404 25-29
GTCAC 2694160 1.7722099 39.536697 160-169
ACCAG 2947370 1.7715591 13.783771 190-199
CTCAG 2692515 1.7711278 86.02968 6
TAGTG 2251140 1.7476202 27.135767 120-129
ACAAT 1968660 1.7321852 28.697414 180-189
AGTTC 2111850 1.7177643 17.919666 190-199
TCTGC 2383690 1.7159805 39.16128 200-209
GAGCA 2961035 1.698668 9.919955 200-209
GGAGC 3499395 1.6957586 17.344706 200-209
TCCAT 1989540 1.6955444 21.54296 45-49
CTGAA 2276305 1.6918434 19.810167 200-209
TCTGA 2072445 1.6857126 28.120878 220-229
CTACG 2559285 1.6834896 18.811876 130-139
AGTCA 2240395 1.6651536 27.628517 160-169
TACGC 2521805 1.6588355 27.97327 140-149
TCTCA 1944355 1.6570364 23.564816 100-109
GCACT 2504930 1.647735 22.11678 60-69
GGGCC 3832075 1.6434904 31.290812 2
CTATT 1551990 1.6355135 18.086166 110-119
ACCCT 2369510 1.6330757 36.22257 10-14
TCTCT 1744215 1.6267742 25.722683 35-39
AGCAG 2818740 1.617037 14.588699 50-59
GTTAC 1973995 1.605634 13.37322 50-59
GGGGC 3880430 1.5883896 29.952349 90-99
GTCCG 2821160 1.5675652 35.839348 70-79
TGTGA 2018085 1.5666932 13.758119 210-219
AGGGG 3373380 1.5602002 33.511967 90-99
TACAA 1759505 1.5481539 15.816551 140-149
AGTGA 2179520 1.5460894 92.35464 9
CGCTG 2777790 1.5434668 18.183208 190-199
TGTGT 1807230 1.5354254 23.100454 240-247
GCCGT 2755100 1.5308592 30.25726 230-239
ACAGA 2252640 1.5298566 24.367228 140-149
AATTC 1577025 1.5185635 31.960815 180-189
CTTTA 1419990 1.4964097 42.710884 45-49
CGTCC 2559560 1.4901129 15.79629 180-189
CAATT 1538850 1.4818038 32.01158 180-189
GGCAG 3053010 1.4794466 15.055238 150-159
AAGGC 2573145 1.4761457 33.848515 25-29
TGTCT 1658130 1.4760119 40.886856 30-34
ACCTG 2243125 1.4755205 26.547485 25-29
GTTCT 1651965 1.470524 18.848276 190-199
ACACA 2058135 1.464498 7.900335 130-139
TTACA 1520440 1.4640764 10.970619 120-129
CATGA 1964530 1.4601192 18.308746 60-69
GGCCT 2626390 1.4593418 79.58703 3
ATTGG 1879520 1.4591215 14.148571 100-109
GGGTG 2854050 1.4445996 17.56439 60-69
TGGAA 2034665 1.4433334 24.107122 120-129
ACTCC 2087525 1.4387304 18.681433 140-149
GTGCG 2708010 1.4361247 19.19887 240-247
TTCTC 1539330 1.4356846 16.626947 190-199
CTTCT 1534745 1.4314082 29.258015 30-34
CCTAC 2073230 1.4288784 22.836033 190-199
TCCGT 1980550 1.4257663 17.019524 150-159
GCAAG 2449860 1.4054203 19.5112 25-29
TTAGT 1396045 1.4041343 25.939362 110-119
CTGGT 2043225 1.4038569 25.153862 35-39
CGTGT 2040020 1.4016547 26.395597 230-239
TAGCA 1866460 1.3872298 12.571669 130-139
TGACC 2101560 1.3823994 9.472527 210-219
GAAGT 1938275 1.3749568 16.76246 140-149
ATACA 1551910 1.3654952 23.730915 35-39
GATCT 1666560 1.3555684 13.563774 220-229
CGGCT 2436130 1.3536247 29.241625 230-239
TCATA 1405405 1.3533057 14.232303 110-119
AGAGC 2345505 1.3455546 31.064802 220-229
AAGCT 1804660 1.3412973 14.382925 200-209
AGGCC 2629465 1.3350405 17.133871 2
ATTCC 1563435 1.3324052 29.588219 180-189
GTGGC 2503380 1.3276043 14.170112 100-109
ATGAT 1437700 1.3213161 16.371738 120-129
ACATG 1765495 1.3121884 17.230677 190-199
GTAGC 2084830 1.3089 17.86268 50-59
CCATG 1987370 1.3072857 13.7865095 160-169
AGATC 1752615 1.3026153 16.768875 210-219
AGGTC 2064010 1.2958286 23.525112 10-14
TGCGA 2051990 1.2882824 15.013374 240-247
ACGCA 2130845 1.280775 22.92902 140-149
TTATA 1070975 1.2752122 23.660137 110-119
ATCTA 1321775 1.272776 16.184217 110-119
CCGAT 1931685 1.2706562 27.830399 160-169
GAGAG 2314865 1.2674612 30.41929 220-229
CATCA 1626730 1.2667799 22.945982 45-49
GGGGT 2485035 1.2578198 102.97321 7
TCACT 1469220 1.2521124 14.980975 190-199
TGAGT 1608140 1.248442 24.62911 90-99
CGGCC 2774925 1.2469251 30.851358 230-239
GAACT 1673460 1.2437841 14.664469 190-199
CGACA 2068035 1.2430221 17.492302 70-79
AAGAG 1908090 1.2368065 14.872343 150-159
TACCA 1572170 1.2242925 14.393271 45-49
CAGCA 2033850 1.2224747 17.088402 45-49
CCATA 1569460 1.2221822 11.845211 160-169
ATGGG 2038270 1.221354 23.68295 100-109
ACGCT 1855240 1.220371 21.671068 190-199
AACCC 1937750 1.2203227 16.702684 140-149
GCTTC 1694360 1.2197428 22.341343 30-34
CTCAA 1566285 1.2197098 18.241304 150-159
GTCCA 1849435 1.2165526 25.64425 180-189
CCTTT 1303745 1.2159618 42.562077 45-49
CTCCC 1988520 1.2129414 11.168214 200-209
ATCCG 1842750 1.2121551 19.065825 70-79
GCAGT 1924495 1.2082384 8.411076 50-59
TACAG 1625440 1.2080938 11.073362 120-129
CTTGA 1463540 1.1904334 25.896652 90-99
GTTAT 1175090 1.181899 18.519869 110-119
TTGAG 1519220 1.179411 24.393343 90-99
CAACC 1863275 1.1734213 14.612427 140-149
ACATA 1327065 1.1676583 19.98636 130-139
CTATC 1350810 1.1511998 11.055275 110-119
ACAAG 1691930 1.1490563 18.364893 80-89
GAAGC 1999465 1.1470406 11.4347725 200-209
GCACC 2155645 1.1467277 11.541908 130-139
ATTAG 1247265 1.146297 25.43092 110-119
GCCCC 2421580 1.1401026 12.142498 70-79
ACACC 1808940 1.1392031 15.294404 40-44
GTGAC 1809225 1.1358694 10.549791 210-219
CACGT 1722940 1.1333444 15.2966385 180-189
CGTGA 1800905 1.1306459 24.657234 150-159
AAACT 1263270 1.1115264 19.846132 130-139
TCAAG 1494900 1.111071 19.654335 150-159
CAACT 1422880 1.1080363 14.689753 130-139
ACTCA 1422020 1.1073664 13.618918 190-199
CTCCG 1898565 1.1052979 12.639824 150-159
ATGGT 1415730 1.099069 10.923383 120-129
TGTCC 1526170 1.0986654 45.61508 15-19
TTGGG 1672320 1.096655 11.028267 100-109
AAGGT 1544570 1.0956738 24.20577 15-19
TGAGG 1817760 1.089222 17.957672 220-229
GATCC 1654960 1.0886275 18.91609 70-79
ATATG 1183000 1.0872343 8.036688 110-119
TGGCA 1729030 1.0855213 11.454135 100-109
GATTG 1387050 1.0768039 17.359814 100-109
TGGAC 1713985 1.0760757 17.244486 80-89
CACAT 1379075 1.0739241 12.5049715 130-139
AGACC 1777430 1.0683497 77.39791 9
AAATA 1069575 1.0633415 23.152317 130-139
CATCC 1542830 1.0633245 9.42604 110-119
ACAGT 1429745 1.0626452 10.639655 120-129
ATCCA 1363080 1.0614684 13.053369 180-189
AACCA 1479730 1.0529248 16.801064 190-199
GATCA 1402860 1.0426632 11.754411 110-119
CAGAA 1533195 1.0412531 22.195099 140-149
GGGAG 2251235 1.0412043 23.275196 5
GCCTA 1573860 1.0352802 21.94983 190-199
CCAGT 1572815 1.0345927 16.808796 190-199
ATATT 868365 1.033964 23.161777 240-247
ACGTC 1570665 1.0331784 16.858303 180-189
CCCCT 1690775 1.0313253 10.909407 70-79
CGCAG 2021905 1.0265683 17.631271 140-149
AGCTC 1560160 1.0262682 13.6729965 210-219
GATAC 1373355 1.0207338 25.469473 35-39
TAGCT 1254415 1.0203326 21.804466 50-59
GCTTG 1482935 1.0188934 20.822777 90-99
GAGAT 1436130 1.0187496 15.77824 210-219
TAGTT 1008605 1.0144492 12.515005 50-59
TCGGA 1600485 1.0048181 65.1748 5
TTACC 1178885 1.0046804 13.311665 45-49
TCATC 1176325 1.0024986 14.051831 110-119
AAGTT 1088110 1.0000257 21.747332 140-149
TATGA 1085475 0.9976041 9.409351 120-129
TATGG 1277225 0.9915438 13.571956 35-39
ATCAA 1124450 0.98938143 12.838146 110-119
ATAAA 991355 0.98557746 16.470888 130-139
TACAC 1262190 0.98290247 24.49526 35-39
TGATG 1264385 0.9815758 18.241858 120-129
ACAAA 1220035 0.9809009 13.740898 130-139
GACCC 1841395 0.9795577 36.404156 10-14
AGAAG 1508700 0.97792554 19.434591 140-149
AAAAA 1056760 0.9599909 5.654879 190-199
AATAC 1090045 0.95910907 18.25289 130-139
TAGAC 1288460 0.9576364 12.88474 170-179
GTAGA 1340965 0.9512423 14.530875 170-179
TCCTT 1019865 0.9511959 10.367239 45-49
AGTCG 1506550 0.9458436 10.908341 150-159
GAACC 1564515 0.94037414 11.395254 190-199
CCGTC 1607545 0.9358732 11.591614 140-149
CATGG 1487540 0.9339087 11.206784 200-209
GACAG 1626780 0.93324095 16.895676 70-79
GTATA 1014560 0.9324298 9.676789 240-247
GGTAG 1555680 0.9321807 12.321741 120-129
GAGCC 1835070 0.9317077 19.059273 220-229
ACAGG 1613160 0.9254276 16.830385 70-79
TGGTT 1083900 0.9208831 9.503383 50-59
AGCCG 1805220 0.9165521 19.570807 220-229
GGTGC 1727755 0.91627115 13.764517 60-69
CGGAC 1797060 0.9124092 10.658878 220-229
AGGCA 1589215 0.9116909 10.904233 80-89
CTTCG 1259595 0.9067624 77.40486 3
ATGAG 1277670 0.9063427 18.061901 60-69
GTCGA 1437370 0.90241104 11.461221 160-169
CTATA 937135 0.9023948 13.883776 50-59
CATAC 1150610 0.89601195 13.233262 130-139
TTTCA 850015 0.8957603 8.512553 100-109
TTATT 685575 0.8933649 15.243224 240-247
AATAA 897485 0.8922544 15.477897 130-139
TCGAG 1417710 0.890068 11.220042 160-169
ACCAA 1245820 0.8864826 14.656255 130-139
AGCCC 1658620 0.8823278 10.552509 80-89
TAACA 996975 0.8772187 10.059118 120-129
CCAAC 1390535 0.87570715 12.085606 130-139
AACTG 1177750 0.8753521 11.419518 60-69
TTCGG 1271730 0.8737789 73.78025 4
GCTCT 1207010 0.86890733 17.077024 210-219
CCGAG 1706535 0.86644757 18.963758 220-229
GCCAA 1432825 0.86122006 14.296404 180-189
ACCGC 1618905 0.86120087 9.983624 220-229
CGAGG 1770495 0.85795754 13.57023 220-229
CATTA 883430 0.85068065 13.276075 110-119
TCCAC 1231610 0.8488305 13.557986 180-189
GGTAT 1091245 0.84716266 7.0727205 110-119
AATCA 962725 0.8470828 14.806102 110-119
TAAAT 772960 0.8409872 17.81524 130-139
TGGCT 1220165 0.83834964 25.970514 40-44
AACTC 1075525 0.8375412 15.836543 190-199
GTTTC 938640 0.8355459 6.9831114 100-109
CGTAT 1020940 0.83042556 7.927656 240-247
GGGAT 1382840 0.8286131 15.420646 100-109
CGAGT 1316280 0.8263882 14.505519 160-169
CACGC 1551870 0.82554054 17.802883 190-199
TTTAG 816665 0.82139707 24.549145 45-49
ATTAT 682280 0.81239223 6.7530193 50-59
CCCCA 1442715 0.8041177 13.202909 80-89
GGTTA 1026760 0.79710114 8.305281 50-59
ATCTT 751045 0.79146403 10.150962 3
GGACT 1260000 0.7910543 7.7049603 90-99
CAAAC 1109280 0.78932536 16.34047 130-139
TATAC 819405 0.7890291 11.373093 130-139
AGCAA 1159555 0.7874994 6.021322 120-129
ATAGT 856590 0.7872478 15.338008 120-129
CCAGC 1459335 0.7763152 6.349286 45-49
GGTTC 1127935 0.7749803 8.9562025 160-169
ATGAC 1040845 0.7735988 10.48841 160-169
GCCAT 1164975 0.76631683 6.331072 60-69
ATGCT 942070 0.7662733 13.339087 50-59
GGAAA 1176945 0.762885 5.290706 110-119
GATGA 1074465 0.7621949 6.0999055 60-69
AGTAA 899680 0.7555369 6.2671394 130-139
CCCAG 1417145 0.75387156 11.104362 80-89
GGGAC 1555660 0.7538515 6.41895 90-99
ACATC 958460 0.7463795 5.2406607 180-189
AAGCA 1098635 0.74612623 8.544457 120-129
GGAGA 1355310 0.74207467 56.877434 7
AACGC 1234475 0.74199885 14.107271 180-189
TGCTA 906080 0.7369993 11.140311 50-59
CACGA 1223360 0.7353181 11.383001 180-189
TTTAT 558585 0.7278857 9.380644 240-247
TTTAC 688460 0.7255109 16.82832 45-49
GTCTG 1049325 0.7209691 17.790169 3
GAAAT 857890 0.7204423 8.267145 110-119
GGATA 1013465 0.7189231 17.601185 35-39
CCCGT 1234315 0.7185879 11.823376 140-149
TAATA 655755 0.71346706 12.425369 130-139
AGTCT 876295 0.7127723 20.645401 8
GGGCA 1470055 0.7123684 15.256318 150-159
GCGGA 1467450 0.71110606 8.289097 220-229
ATATA 648130 0.705171 11.696866 130-139
TTATG 700605 0.7046646 10.631994 50-59
GATTA 756395 0.6951636 8.427652 160-169
GCGAC 1351015 0.68594176 8.131962 70-79
GTCCT 952385 0.68560684 7.351092 45-49
CCCCC 1388660 0.6850102 11.10213 80-89
CACAA 962620 0.6849672 9.149138 130-139
GTTCC 949860 0.683789 9.807107 140-149
TCTTC 728385 0.67934173 36.138767 2
GCTAC 1024715 0.67405427 11.177774 50-59
GGCCC 1492030 0.6704504 12.5722275 70-79
ATGCC 1017330 0.6691965 6.577348 50-59
ACGCC 1257425 0.6689061 12.630965 180-189
CAACG 1104055 0.66360813 14.0837345 180-189
GGAGG 1417210 0.65546465 11.433596 6
GTTCA 805835 0.6554606 10.923691 160-169
GTCTA 803965 0.6539396 10.771577 30-34
AAATC 737230 0.64867413 8.900866 110-119
CCTAT 759590 0.6473449 8.024002 110-119
CTGCG 1159010 0.6439988 14.603609 25-29
CCCTA 929400 0.64054614 13.473769 110-119
GACTG 1002660 0.6294909 7.6022205 1
TCAAC 804260 0.6262996 7.934616 110-119
GGGTT 953715 0.62541634 7.4053197 30-34
AGATG 873245 0.61945504 5.372242 120-129
CGGAG 1277150 0.61888933 50.274662 6
TATAG 661000 0.607491 5.141598 120-129
GGCAA 1041785 0.59764475 7.4523096 80-89
GTAAC 803460 0.5971645 9.226284 120-129
GGTGA 973665 0.5834309 8.910531 9
GACCA 968340 0.58203465 5.7667522 170-179
GTAAT 628295 0.5774335 6.595007 130-139
CTGAC 868215 0.57110906 9.121966 220-229
AATGG 800610 0.56792986 8.55323 120-129
AAGTA 675155 0.56698436 7.2658205 120-129
GAAGA 870140 0.56401676 7.3005543 15-19
GGGGA 1219410 0.5639815 11.9218235 4
CTTTG 627830 0.5588733 7.0600452 120-129
TGCGC 1003345 0.55750424 10.895462 25-29
ACCCG 1038540 0.552467 9.311374 140-149
TGCCA 838365 0.5514739 6.203757 60-69
CCGTA 836230 0.5500695 5.790482 230-239
ACCTA 698545 0.5439764 6.198277 130-139
AAGAT 647280 0.54357535 6.777124 15-19
GCGCT 977315 0.5430407 10.322554 25-29
GGTTT 624425 0.53051245 6.7887955 100-109
TTGGT 624145 0.53027457 8.020878 120-129
TCTTT 458705 0.5290168 5.3424363 120-129
CGCCG 1162795 0.52250725 7.9443073 220-229
GACCG 1025615 0.5207285 6.701385 220-229
TCCGG 928825 0.5160974 6.948543 70-79
TCAAT 535950 0.5160819 8.563125 110-119
CCACG 965060 0.51337814 10.127607 180-189
CACCG 935540 0.49767455 7.1501875 45-49
CATGC 749450 0.49298579 9.186687 60-69
GGTAA 685910 0.486565 9.109588 120-129
TTTGG 567435 0.48209366 6.8803024 120-129
GCATG 750585 0.47123295 9.61642 60-69
CATAG 633435 0.47079486 6.343466 120-129
TTAGC 574930 0.46764413 7.9074903 45-49
GCCGC 1039955 0.46730852 9.47988 220-229
CCGCG 1032490 0.4639541 5.9636927 220-229
ACGAG 803215 0.46078336 10.47092 180-189
TGGCC 827515 0.45980507 17.5665 2
CCATT 538270 0.4587295 5.318667 110-119
ATTAA 413900 0.45032674 6.241969 110-119
CGAGC 884500 0.4490812 10.279708 180-189
GACGA 776110 0.44523397 8.567186 220-229
TATGT 440685 0.4432385 5.66357 140-149
ATCCT 518730 0.44207692 5.799611 110-119
CAATG 582565 0.43298626 7.3561673 120-129
CGCGG 1006875 0.43182594 5.566747 220-229
ACTTC 505755 0.43101922 24.836 4
ATGGC 681225 0.42768735 7.4219403 1
CCGGC 951650 0.42762825 5.511564 70-79
TCACG 647495 0.42592016 6.153197 160-169
CAATC 538355 0.419232 6.7630844 110-119
AGCTT 504370 0.41025108 5.7554955 45-49
CGGTT 585915 0.40256986 8.825204 160-169
GGCAC 774485 0.39322406 6.7982435 35-39
ACGAC 650400 0.39093223 8.4382 220-229
AAGTC 519210 0.38589817 5.4326406 180-189
TCACA 479990 0.37378156 11.742584 7
CACTT 438050 0.37331906 5.9471307 3
ACCCC 669600 0.3732111 5.343002 140-149
ATCCC 541445 0.37316605 6.5865097 110-119
ACATT 386730 0.37239367 5.9809203 110-119
CAAGT 497740 0.36994082 5.4008303 180-189
CGGCA 716685 0.36387762 5.475663 70-79
TGACG 571840 0.3590131 8.421957 220-229
GAGGC 735775 0.35654643 8.980692 35-39
TTTCT 299820 0.3457774 9.438172 4
ACGAT 464290 0.34507936 6.9120135 160-169
TACTT 327010 0.3446087 10.54518 1
CTCGG 602680 0.33487645 8.433442 6
GCGAG 686765 0.33279687 7.6122804 240-247
CCGGT 597300 0.33188713 7.014067 160-169
CGGTG 624235 0.33104724 7.900765 8
TGGGC 610535 0.3237818 9.009234 1
TGGTC 466960 0.32083833 7.1180377 8
CCTAA 403530 0.31424004 6.412633 110-119
GCCTT 433535 0.31209496 7.3856773 1
GAGGT 518110 0.3104572 14.616627 7
TATTC 292835 0.30859452 5.4547267 6
ATTCT 282325 0.2975189 7.1733136 4
GCTTA 357040 0.2904139 5.119956 110-119
GCTTT 325825 0.29003853 6.1645923 45-49
TGCTG 421300 0.28946635 13.274933 1
TGTAA 290600 0.26707548 10.615014 25-29
CCTCG 454815 0.26478213 9.2576685 5
GTAAG 371420 0.26347473 6.537441 25-29
TAAGG 366315 0.25985342 5.7274647 25-29
TCGGT 367835 0.25273168 10.286757 7
TTCCT 266100 0.24818306 6.358577 4
AATCT 249415 0.24016902 7.389887 2
CTCTT 254735 0.2375833 7.418478 1
TTGGC 341700 0.23477487 7.1603446 1
TTCTT 201735 0.2326576 15.4831915 1
TCCTA 268305 0.2286574 7.0756793 9
AACTT 229765 0.22124743 8.726984 3
TAACT 227255 0.21883053 5.141286 2
AACCT 276635 0.21542335 6.9186134 2
CTTTC 230415 0.2149008 5.1787734 45-49
CGGGG 523480 0.21427783 11.341186 3
TGCTT 215395 0.19173743 8.602533 1
GTCTT 179400 0.15969588 9.060115 1
GACTT 192035 0.15619995 6.005824 3
TCGCA 214310 0.14097245 7.7626295 7
TAGGC 222720 0.13982828 8.00062 1
TCGGG 187655 0.09951808 5.0544896 2
TTGCT 96795 0.08616368 5.4471016 4