FastQCFastQC Report
Thu 4 May 2017
HCGCLBCXY_s2_2_illumina12index_14_SL248361.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGCLBCXY_s2_2_illumina12index_14_SL248361.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 6643303
Filtered Sequences 0
Sequence length 50-251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38545 0.5802083692404215 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27528 0.41437218805163634 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25311 0.38100023437136615 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 23099 0.34770354445672585 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22428 0.33760314710920153 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22404 0.3372418810341783 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21927 0.3300617177930918 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 20787 0.3129015792294887 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20567 0.30958997354177586 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20304 0.3056310994696464 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20195 0.3039903493789159 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19758 0.297412296262868 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19398 0.2919933051375197 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18785 0.28276596747130156 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 17568 0.264446766916999 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17405 0.26199316815746626 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16077 0.24200311200618124 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16044 0.24150637115302434 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15937 0.23989572656854583 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15067 0.22679983134895396 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14626 0.22016156722040225 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14286 0.21504363115757325 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 14175 0.21337277556059087 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 14160 0.21314698426370135 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13761 0.20714093576644027 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13757 0.2070807247539364 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13726 0.2066140894070314 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13597 0.2046722842537816 No Hit
TTCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 12944 0.19484283646252473 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12467 0.1876626732214382 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 12421 0.18697024657764366 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 12264 0.18460696433686677 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 11919 0.17941376450840793 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 11781 0.17733648457702442 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11761 0.17703542951450504 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 11715 0.17634300287071056 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11628 0.17503341334875136 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 11477 0.17276044762673026 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11452 0.17238412879858106 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 11304 0.17015632133593786 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11075 0.16670924087009129 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 10789 0.16240415347606454 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 10512 0.15823454086017152 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 10364 0.1560067333975283 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10316 0.15528420124748188 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9750 0.1467643429781842 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9701 0.14602675807501178 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 9657 0.1453644369374692 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9650 0.14525906766558744 No Hit
GGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 9603 0.14455158826866696 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9563 0.14394947814362827 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9517 0.14325705149983373 No Hit
GAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 9482 0.14273020514042487 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 9479 0.14268504688104697 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 9384 0.14125503533408004 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9350 0.14074324172779715 No Hit
GCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 9228 0.1389068058464291 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 9219 0.1387713310682954 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 9069 0.13651341809940026 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8961 0.13488772076179575 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 8904 0.1340297138336156 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8884 0.13372865877109624 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8872 0.13354802573358465 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8824 0.13282549358353818 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 8721 0.13127506001156353 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 8583 0.12919778008018 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 8426 0.12683449783940307 No Hit
CCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8394 0.12635280973937213 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 8320 0.12523890600805052 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8075 0.12155098149218846 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8034 0.12093381861402377 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7920 0.11921780475766346 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7816 0.11765231843256284 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 7755 0.11673410049187882 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 7510 0.11304617597601675 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7023 0.10571548520367054 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 6737 0.1014103978096438 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 6673 0.10044702160958187 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 12710390 7.6812143 67.754074 35-39
TGGAT 9625395 7.22146 79.79122 35-39
TATTA 6017645 6.863994 149.74075 240-247
TCACC 10298585 6.754301 75.38532 160-169
TCTCC 8760885 6.321348 90.32258 20-24
TGTAT 6299850 6.1127696 84.5867 240-247
CTGTG 9124595 6.0665736 88.17734 25-29
CTGAG 9964325 6.0216975 50.611862 15-19
AGTGG 10022095 5.813847 38.999886 100-109
TCCCT 7697505 5.5540743 68.56621 10-14
TGGGT 8533155 5.445949 45.1205 100-109
TTACT 5257740 5.314628 129.91954 240-247
TTCAC 6432745 5.2376285 80.185165 40-44
ATTAC 5468330 5.024231 121.74518 240-247
CCTGA 7811840 4.9180202 51.73763 15-19
ATTCA 5333170 4.900048 114.6714 40-44
CTCCA 7201400 4.7230196 43.218307 80-89
AGCCT 7358025 4.632316 54.356304 210-219
TGAGA 6651795 4.53614 91.07074 15-19
TCTGG 6789320 4.5139437 132.4619 35-39
CAGCC 8809705 4.4674826 59.265175 30-34
CTCTG 6415280 4.443359 71.24253 35-39
AAGGG 8393015 4.4255195 38.59804 90-99
CCAGG 9028490 4.394918 52.004826 80-89
ACACG 7575605 4.3350635 55.689587 230-239
TGGAG 7460665 4.327954 36.283295 90-99
TCAGT 5448895 4.258737 104.75943 7
TCCAG 6763505 4.25803 42.031445 80-89
CACCT 6475185 4.246734 50.51701 40-44
TACTG 5369565 4.196735 92.35197 240-247
ACCAT 5652035 4.182966 65.85156 160-169
CACCA 6982540 4.162531 56.705276 160-169
GACAC 7245325 4.146064 54.793804 230-239
GATTC 5290545 4.134974 61.755787 40-44
GTATT 4188410 4.064031 91.20377 240-247
CCCTG 7282295 4.06283 79.7633 10-14
GAAGG 7703945 4.0621824 32.27488 150-159
CTGGG 7787065 4.0031543 131.14153 3
TACTA 4329125 3.9775443 33.75909 130-139
TGAAG 5722680 3.9025376 41.62754 150-159
ACTAC 5162575 3.8207254 33.514996 130-139
GGGTC 7402440 3.8054268 111.13995 8
GAGAC 6925080 3.8039691 60.934727 8
GCTGG 7397075 3.8026695 38.643673 90-99
GACTC 5992695 3.7727592 52.037792 20-24
AGACT 5293670 3.760715 65.472275 15-19
TCCTG 5326665 3.689361 67.398705 20-24
GAGTG 6299540 3.654382 38.82347 90-99
CTCCT 5041110 3.6373732 96.95279 20-24
GGACA 6545450 3.5954366 31.603678 220-229
TATCT 3523080 3.5611992 60.80107 200-209
GGTCC 6618605 3.544548 143.48964 9
CCTGT 5044600 3.4939973 65.35061 25-29
AGCTG 5738710 3.4680495 33.33658 60-69
CAAGA 5354420 3.4575393 42.86252 180-189
ACTGT 4397485 3.436978 77.556015 240-247
ACTGG 5616975 3.394482 42.650394 60-69
ACTCT 4105870 3.343055 68.85716 20-24
CCATC 5082985 3.333663 28.569876 170-179
GTGTA 4364395 3.2743907 45.638073 230-239
CTATG 4161960 3.252897 32.97189 50-59
CATCT 3981960 3.2421658 38.239708 170-179
AGTAG 4743885 3.235056 30.347553 50-59
ACCTT 3961760 3.2257187 82.02674 40-44
CTGCA 5106440 3.2148092 39.917248 200-209
GGCTG 6197970 3.1862366 39.226643 90-99
GGATT 4241200 3.1819637 58.304302 40-44
ATCTC 3808030 3.1005497 54.683254 170-179
GTCCC 5507775 3.0728164 76.36223 10-14
GGAGT 5269150 3.0566497 33.64663 90-99
ATCTG 3879335 3.0320034 44.97092 200-209
GTGAA 4430545 3.021376 43.262474 10-14
AGACA 4653915 3.0051985 33.680386 170-179
CCTCA 4465455 2.9286575 88.28698 5
GACAA 4531190 2.9259505 26.978195 180-189
TGTGC 4363690 2.9012408 59.156624 25-29
GAGCT 4799395 2.900397 23.689556 60-69
CTTCA 3543525 2.8851862 64.375175 45-49
GTCTC 4119115 2.8529868 30.601028 15-19
GGAAG 5388950 2.841518 23.357859 80-89
CCTTC 3888340 2.8056014 74.391 45-49
AAGAA 3829000 2.7900798 35.19702 190-199
TATCA 3006190 2.7620487 18.510035 170-179
GAACA 4276775 2.7616656 40.10077 210-219
AGGCT 4561700 2.756752 23.362144 25-29
TGCAA 3852165 2.7366447 40.355526 200-209
GCTAT 3501270 2.7365162 45.094624 50-59
AGGGC 5828665 2.7235713 35.35437 150-159
TATGC 3464340 2.7076526 24.107117 50-59
ATGAA 3371610 2.7028844 32.862087 210-219
GCTGT 3995590 2.656506 27.474585 230-239
AGGGA 5018370 2.646116 33.276295 80-89
CGCCA 5211935 2.6430202 42.70836 70-79
GTATC 3368315 2.6326013 29.564367 200-209
CAGGC 5398885 2.6280866 35.628105 70-79
CAGGG 5436875 2.540499 30.443558 80-89
GGGAA 4812070 2.537337 27.770657 80-89
CCAAG 4424620 2.5319443 38.239708 180-189
GGGCT 4893940 2.515864 47.632275 90-99
ACAGC 4385920 2.5097983 31.671427 210-219
GCCTC 4496050 2.5083697 81.33794 4
CAGTG 4136130 2.4995694 81.31605 8
GCAGC 5090745 2.478089 36.824905 30-34
CTCTC 3394320 2.449145 99.50072 20-24
AGAAC 3776340 2.438517 33.932358 190-199
CTACA 3293915 2.4377651 22.9032 190-199
ATCAG 3426645 2.434348 20.45107 45-49
GTGGA 4192700 2.432198 24.06732 100-109
TATAT 2123135 2.4217424 27.776066 110-119
GTGGT 3790710 2.419271 27.867323 120-129
CAAAT 2888080 2.4119332 37.41487 200-209
TGAAC 3394460 2.4114833 44.338593 210-219
GCCTG 4467970 2.3927906 38.18255 210-219
CACTG 3791590 2.3870325 23.77294 60-69
GAGTC 3942505 2.382557 27.36012 160-169
TTCAG 3008630 2.3514795 60.157864 45-49
AATGA 2903385 2.327527 32.096203 210-219
CACGG 4768450 2.3212016 51.46564 230-239
CCGCC 5157055 2.317537 35.617092 70-79
TCCAA 3125260 2.3129463 44.16095 180-189
GTAGT 3061515 2.296904 30.559925 120-129
ACGGC 4714925 2.2951462 54.23837 230-239
ATGGA 3344725 2.2809095 17.87557 120-129
CCTCT 3145830 2.269849 53.325253 35-39
TTCCA 2786105 2.2684846 29.36566 180-189
CCCTC 3898635 2.2658904 24.412771 20-24
AAATG 2823910 2.2638152 35.037376 200-209
GCTCC 4025980 2.2461152 36.33431 80-89
GATGG 3868610 2.2441921 23.756794 100-109
CAGTA 3154650 2.2411182 23.641113 45-49
AGCTA 3154265 2.2408445 34.621853 50-59
TGCAG 3689385 2.2295902 45.394176 30-34
GTGGG 4498300 2.2197855 31.861803 100-109
TCCGC 3895465 2.1733 44.23264 70-79
TACAT 2365205 2.1731198 21.00208 190-199
CATAT 2362425 2.1705656 14.1685295 170-179
CTCAC 3308385 2.1697958 46.375385 20-24
GGCCG 5209475 2.1571834 25.773155 230-239
TCAGC 3415190 2.150066 13.960047 45-49
CAAGG 3914155 2.1500583 19.556536 80-89
CTGTA 2748465 2.1481402 29.952934 190-199
GCAGA 3899265 2.141879 26.240786 140-149
TGGTG 3340715 2.1320794 28.574615 35-39
ATACT 2303115 2.1160727 32.323315 130-139
ATATC 2282355 2.0969985 18.639439 110-119
CTGTC 3026825 2.0964434 41.736305 30-34
CAGAG 3809680 2.0926697 34.402393 170-179
TGGTA 2762720 2.072733 35.230446 120-129
CTACT 2534370 2.0635185 20.095127 50-59
TGCAC 3253385 2.0482004 19.670752 60-69
TAGTA 2321670 2.0476205 21.6992 120-129
GGTGG 4146045 2.0459573 16.388496 40-44
CCGTG 3800475 2.0353181 22.601807 230-239
AGCAC 3532980 2.021712 20.83289 130-139
CACAG 3531895 2.0210912 18.040066 140-149
GCCAG 4133280 2.0120113 38.60075 70-79
AGAGT 2935610 2.0019166 29.258457 150-159
ATGCA 2817645 2.001704 22.46398 60-69
GGCTC 3725785 1.9953185 19.678133 80-89
AACAG 3051365 1.9703748 38.49521 210-219
GCACA 3433385 1.9647198 18.165287 130-139
GCTGA 3243700 1.9602511 28.014381 200-209
CAGAC 3419675 1.9568744 28.663614 140-149
AACTA 2322105 1.9392685 34.52779 130-139
CAGTT 2454250 1.9181882 21.74102 190-199
GGGGG 5024425 1.9171124 82.85371 5
ATCAT 2081425 1.9123864 25.811169 110-119
AGTTA 2161635 1.906476 13.383346 50-59
CCTGC 3407480 1.9010508 50.495102 20-24
CGATT 2406950 1.8812195 43.871826 160-169
TGGGA 3235420 1.876877 19.157738 4
CAGCT 2974240 1.8724617 14.105287 50-59
TGAGC 3097390 1.8718321 17.468155 200-209
TCTGT 2157750 1.8553779 21.3613 210-219
GGTCT 2778530 1.847332 39.9729 15-19
GCAAA 2854725 1.8433974 36.061234 200-209
GGATC 3042415 1.8386093 15.594315 70-79
CCAGA 3210795 1.8373451 35.89921 170-179
GAGGA 3478195 1.8340034 31.255192 220-229
GGATG 3161475 1.833981 25.110939 100-109
ACAAC 2722290 1.8312811 17.700403 180-189
ACTAT 1991540 1.8298013 18.670218 130-139
TGGGG 3695995 1.8238703 111.04072 4
GTGCA 3017690 1.8236674 51.262486 25-29
GCCGA 3735585 1.8184199 19.743193 220-229
GGCTT 2719995 1.8084145 25.401926 25-29
AGGAC 3290895 1.8076994 23.847443 220-229
AGAGA 2900100 1.797636 28.113453 170-179
TCTAT 1770455 1.7896111 14.179973 110-119
GTCAC 2842415 1.7894701 38.865585 160-169
AACAC 2639430 1.7755411 26.885847 190-199
CTCAG 2801915 1.7639728 84.62593 6
ACCAG 3042740 1.7411773 13.425709 190-199
TTCTG 2024190 1.7405341 50.838654 30-34
TCTGC 2511615 1.739598 40.1126 200-209
CCTGG 3245875 1.738306 33.952328 2
TAGTG 2303495 1.7281991 27.961987 120-129
ACCCT 2591430 1.6995829 37.5636 10-14
GGGCC 4093475 1.6950605 30.82491 2
TCCAT 2073945 1.688634 19.696169 45-49
AGTTC 2149845 1.6802717 18.620764 190-199
ACAAT 2001295 1.6713492 28.234268 180-189
GGGGC 4160040 1.6535779 30.938677 90-99
CTACG 2624940 1.6525565 18.111052 130-139
AGTCA 2313355 1.6434474 27.583101 160-169
TCTCA 2014260 1.6400378 23.472925 100-109
TACGC 2589685 1.6303613 26.942324 140-149
GGAGC 3480555 1.6263654 16.100018 200-209
GCACT 2578985 1.623625 22.090136 60-69
AGGGG 3609495 1.6190122 34.483074 90-99
TCTGA 2057245 1.6078978 27.029655 220-229
AAAAA 1875870 1.6068544 10.331031 90-99
GTCCG 2974400 1.5929195 35.90313 70-79
CTGAA 2231460 1.5852679 20.030262 200-209
GCCGT 2953765 1.5818685 30.403051 230-239
GTTAC 2023135 1.581238 13.74783 50-59
GAGCA 2860615 1.571345 9.29114 200-209
AGTGA 2301220 1.5692991 91.59281 9
TGTGA 2071400 1.5540695 15.079899 210-219
CTATT 1518465 1.5348946 16.737484 110-119
ACCTG 2436055 1.5336422 26.724625 25-29
TCTCT 1702885 1.5253956 24.726593 35-39
CGTGT 2285325 1.51942 26.715666 230-239
CGCTG 2829755 1.5154558 17.683138 190-199
AGATC 2132855 1.5152172 16.033236 210-219
AATTC 1640510 1.5072794 31.554325 180-189
TGTGT 1823685 1.5052726 22.020056 240-247
CAATT 1630500 1.4980825 31.432343 180-189
AGCAG 2726295 1.4975628 13.376744 50-59
TGTCT 1724560 1.482892 41.178646 30-34
ACAGA 2292590 1.4804069 23.257753 140-149
TACAA 1766615 1.4753599 14.629032 140-149
AAGAG 2373720 1.4713577 15.92963 150-159
CGTCC 2632195 1.4685153 16.037842 180-189
ATTGG 1954905 1.4666692 15.390397 100-109
TGGAA 2150470 1.4664963 25.516811 120-129
AGAGC 2648695 1.4549369 31.221497 220-229
CTGGT 2185520 1.4530637 24.470772 35-39
ACTCC 2215490 1.4530236 18.617002 140-149
CATGA 2039745 1.4490702 17.557894 60-69
GGGTG 2921320 1.4415897 16.530548 60-69
TCATA 1567295 1.4400104 14.103845 110-119
GGCAG 3080745 1.4395456 14.217576 150-159
GATCT 1824250 1.4257939 12.936524 220-229
GTTCT 1651020 1.4196575 19.784086 190-199
ACACA 2109305 1.4189268 7.4499946 130-139
GCAAG 2567280 1.4102153 18.470087 25-29
TCCGT 2035005 1.4094876 17.05866 150-159
CCTAC 2139770 1.4033629 20.751617 190-199
TGACC 2228485 1.4029644 10.379087 210-219
GGCCT 2602145 1.3935609 77.97898 3
GTGCG 2709170 1.392723 19.119713 240-247
CTTTA 1375610 1.390494 38.32182 45-49
TTAGT 1429560 1.3871078 25.319462 110-119
TTCTC 1546785 1.3855656 17.851234 190-199
TTACA 1496775 1.3752176 9.654079 120-129
CTTCT 1521690 1.3630863 27.418436 30-34
GAAGT 1989330 1.3566083 16.177654 140-149
AAGGC 2456095 1.349141 32.023838 25-29
TAGCA 1875475 1.3323699 12.022506 130-139
CGGCT 2478945 1.3275819 29.842842 230-239
ATTCC 1622675 1.3212041 29.392454 180-189
GTGGC 2559950 1.3160125 14.575413 100-109
ATGAT 1490245 1.3143368 16.985052 120-129
AAGCT 1840795 1.3077327 14.985007 200-209
CCATG 2071350 1.3040386 14.03966 160-169
CCGAT 2070745 1.3036577 28.795876 160-169
CATCA 1760095 1.3026135 22.818695 45-49
GTAGC 2152430 1.3007686 17.582842 50-59
TTATA 1137425 1.2973977 24.34571 110-119
GAGAG 2457875 1.2960031 30.805975 220-229
AGGTC 2114910 1.2780943 23.22279 10-14
ATACA 1529620 1.2774374 21.402086 35-39
GGGGT 2571780 1.2691016 103.08369 7
TGCGA 2096945 1.2672377 15.176213 240-247
TCACT 1553605 1.2649662 15.481352 190-199
ACATG 1763860 1.2530768 16.331478 190-199
AGGCC 2573330 1.2526537 17.528488 2
AACCC 2100755 1.2523319 16.706244 140-149
GAACT 1744875 1.2395895 15.003749 190-199
CCATA 1669500 1.2355658 12.26182 160-169
GTTAT 1270070 1.232354 19.025028 110-119
CGGCC 2853680 1.2310177 30.732647 230-239
GTCCA 1937000 1.2194573 25.51131 180-189
GCTTC 1759885 1.2189338 22.963343 2
CTCCC 2096385 1.2184209 10.273295 190-199
CAACC 2043655 1.2182927 14.138324 140-149
ACGCA 2117405 1.2116636 21.77765 140-149
CCTTT 1346805 1.2064294 40.27241 45-49
CGACA 2108005 1.2062845 16.449196 70-79
CTCAA 1616130 1.1960676 17.990189 150-159
ATCCG 1896730 1.1941049 18.838379 70-79
ACTCA 1608425 1.1903653 14.043635 190-199
TGAGT 1581030 1.186169 23.50756 90-99
ACGCT 1882470 1.1851273 20.986774 190-199
ACACC 1983535 1.1824532 14.097807 40-44
ATCTA 1280385 1.1764013 15.709423 110-119
CAGCA 2036520 1.165378 15.981944 45-49
TCGGA 1912725 1.1559087 67.26996 5
ATGGG 1989035 1.1538452 22.35435 100-109
GCAGT 1902965 1.1500105 7.8640046 50-59
GCCCC 2551200 1.1464877 11.484404 70-79
TACCA 1545975 1.1441473 12.083664 45-49
TGTCC 1645315 1.13958 46.48064 15-19
GAAGC 2066345 1.13505 11.922216 200-209
ACAAG 1743645 1.1259335 17.26558 80-89
TTGAG 1499805 1.12523 23.269527 90-99
CACGT 1786485 1.1246991 14.809207 180-189
CAACT 1517955 1.1234103 14.928831 130-139
CGTGA 1857440 1.1224986 24.51039 150-159
CTTGA 1435015 1.1215764 24.328878 90-99
GTGAC 1844520 1.1146907 11.327972 210-219
TTGGG 1745270 1.1138498 11.670164 100-109
TGGCA 1842795 1.1136483 11.851379 100-109
ACATA 1330935 1.1115088 19.048334 130-139
TCAAG 1561405 1.1092492 20.018774 150-159
ATTAG 1255410 1.1072216 24.777239 110-119
TGAGG 1896640 1.1002465 17.576195 220-229
AGACC 1900990 1.0878223 78.79574 9
CTCCG 1949465 1.0876163 12.613365 150-159
CATCC 1652170 1.0835716 9.118546 110-119
GCACC 2127400 1.078824 11.368691 130-139
ATATG 1222440 1.0781435 8.767861 110-119
GATTG 1436345 1.077619 18.326105 100-109
AAACT 1289390 1.0768131 18.921165 130-139
TACAG 1515735 1.0768044 9.33612 120-129
TGGAC 1779605 1.0754609 16.385489 80-89
CTATC 1308655 1.0655247 9.855153 110-119
ATGGT 1416410 1.0626628 10.734892 35-39
AAGGT 1552520 1.058729 22.71039 15-19
GTAGA 1550635 1.0574435 15.304812 170-179
GATCC 1675645 1.0549185 18.660563 70-79
AACCA 1567040 1.0541457 16.189535 190-199
ATCCA 1420760 1.051478 12.081824 180-189
CCAGT 1659285 1.0446191 16.925592 190-199
GGGAG 2326515 1.0435411 23.414577 5
AAATA 1102615 1.0390979 22.719755 130-139
ACGTC 1646885 1.0368124 16.444748 180-189
ATATT 902325 1.0292321 23.104597 240-247
CACAT 1387930 1.0271813 11.772902 130-139
CCCCT 1766895 1.026921 10.29022 70-79
TATGA 1162715 1.0254683 9.084941 120-129
TAGTT 1056475 1.025102 12.435873 50-59
ACAGT 1439360 1.0225463 9.974404 120-129
TGATG 1352425 1.0146579 19.123884 120-129
TATGG 1346415 1.010149 14.354249 35-39
ATAAA 1070640 1.008965 16.566948 130-139
AGCTC 1600680 1.0077236 13.39063 210-219
CGCAG 2068055 1.0066944 17.010838 140-149
ATCAA 1202235 1.0040271 13.025649 110-119
TAGCT 1281350 1.0014752 21.105408 50-59
GACCC 1974630 1.001353 37.370327 10-14
TACAC 1351835 1.0004679 23.590721 35-39
GAGAT 1447450 0.9870774 14.951161 210-219
TCATC 1210110 0.98528796 12.604367 110-119
CTTCG 1411400 0.9775656 80.018875 3
CATTA 1059045 0.9730369 13.262632 110-119
GCTTG 1451260 0.964884 19.727861 90-99
CAGAA 1489865 0.9620588 21.025953 140-149
GAACC 1681120 0.9620039 10.472921 190-199
TCCTT 1071180 0.9595323 11.0805855 45-49
AAGTT 1086200 0.95798516 21.01317 140-149
ACCAA 1421805 0.9564464 14.780063 130-139
GATCA 1335855 0.9490145 10.824525 110-119
GCCTA 1503325 0.94643295 20.023113 190-199
GATAC 1332195 0.9464144 23.843224 35-39
AGTCG 1563945 0.9451321 11.618169 150-159
TAGAC 1330195 0.9449936 13.673292 170-179
AATAC 1130910 0.9444611 18.298529 130-139
TGGTT 1143580 0.9439128 10.437933 50-59
CTATA 1024120 0.94094825 14.057286 50-59
GAGCC 1932125 0.9405259 19.219894 220-229
CCAAC 1577250 0.9402527 12.147652 130-139
ACAAA 1233995 0.9367218 13.228504 130-139
CCGTC 1678325 0.93634623 11.706378 140-149
TTCGG 1405540 0.9344866 76.61214 4
AGAAG 1506765 0.93397295 18.548824 140-149
CGTAT 1191185 0.9310042 7.857191 240-247
TTACC 1134580 0.92379045 11.034095 45-49
GACAG 1669365 0.91698766 15.9106455 70-79
TTATT 728835 0.9146152 15.572972 240-247
TCCAC 1388880 0.9108934 12.773539 180-189
ACAGG 1654635 0.90889645 15.990858 70-79
GCCAA 1576480 0.9021247 14.708848 180-189
GTCGA 1491230 0.9011885 10.513224 160-169
AATAA 953910 0.8989592 15.735959 130-139
GGAAA 1447795 0.8974202 5.549752 110-119
AGCCG 1840870 0.8961046 19.814562 220-229
GGTAG 1543630 0.89546436 12.291865 120-129
TCGAG 1476700 0.8924077 10.842293 160-169
CATGG 1473220 0.8903046 10.557775 200-209
AGGCA 1616500 0.8879486 10.892721 80-89
CGGAC 1823330 0.8875664 10.4964485 220-229
TTTCA 876985 0.8864739 8.248338 100-109
GTATA 1004745 0.88614506 9.706666 240-247
AGCCC 1745365 0.88509065 10.692724 80-89
GGTGC 1715365 0.8818304 12.777106 60-69
AATCA 1045410 0.87305725 15.380609 110-119
CATAC 1170215 0.8660543 12.253172 130-139
AACTG 1218455 0.86561155 11.848128 60-69
TAACA 1036195 0.8653616 9.810465 120-129
ACCGC 1697565 0.86085093 10.302924 220-229
ATGAG 1258510 0.85823125 16.815453 60-69
CCGAG 1753370 0.85351104 19.272066 220-229
CGAGG 1825690 0.8530937 14.331267 220-229
GCTCT 1229390 0.85150164 17.39076 210-219
CCCCA 1599680 0.8450853 12.906292 80-89
AACTC 1134910 0.8399257 16.285818 190-199
ATAGT 945875 0.83422416 16.560635 120-129
CGAGT 1376295 0.83173037 14.518888 160-169
TAAAT 800575 0.8300295 17.952631 130-139
GGTTA 1101815 0.82663757 8.9931755 50-59
GGACT 1361915 0.82304007 7.7938986 140-149
TTTAG 836535 0.81169325 23.46618 45-49
ATTAT 706600 0.8059795 6.7715993 50-59
GGTAT 1071650 0.8040062 6.9216814 110-119
TATAC 873690 0.8027351 11.240674 130-139
GTCTG 1205895 0.8017507 21.03579 3
GTTTC 927595 0.7976082 6.7724886 100-109
GGAGA 1502700 0.7923526 58.44002 7
TGGCT 1187295 0.78938437 23.530182 40-44
CACGC 1555085 0.788598 17.030725 190-199
ATGAC 1109530 0.78822935 10.292836 160-169
GGGAT 1354905 0.7859844 14.5057535 100-109
CCAGC 1529555 0.7756515 6.266968 45-49
CAAAC 1141945 0.76818496 15.406262 130-139
GAAAT 951135 0.76248676 8.901021 110-119
GATGA 1116730 0.76154536 5.9387445 60-69
TAATA 731730 0.75865155 12.842369 130-139
AGCAA 1173340 0.75766736 5.4965935 120-129
ATCTT 748910 0.75701314 9.89569 1
CCCAG 1484160 0.75263125 11.114361 80-89
AGTAA 936665 0.75088674 6.013143 130-139
AAGCA 1160955 0.7496699 8.327945 120-129
GCCAT 1173845 0.7390055 6.207735 60-69
GGGAC 1576100 0.7364672 6.0994897 90-99
TTATG 758405 0.7358834 11.723716 50-59
AACGC 1284725 0.7351709 14.471434 180-189
GGTTC 1085150 0.72147226 8.571136 160-169
ATATA 692305 0.71777606 11.779217 130-139
AGTCT 911435 0.71235764 15.506738 8
TTTAT 566745 0.71120846 9.925335 240-247
CACAA 1051770 0.70752436 9.043047 130-139
GTCCT 1015720 0.7035093 8.527143 8
GCGGA 1503785 0.7026765 8.830043 220-229
ATGCT 896690 0.7008333 11.53303 50-59
TCTTC 778565 0.6974162 37.724133 2
CCCGT 1238700 0.6910772 11.8448105 140-149
GGCCC 1592360 0.6869107 11.824685 70-79
CCCCC 1465260 0.68597066 11.107947 80-89
CAACG 1188615 0.680173 14.502289 180-189
CACGA 1187460 0.679512 10.616451 180-189
GGATA 993250 0.67733914 15.190445 35-39
GGGCA 1444630 0.675035 14.322697 150-159
ACGCC 1326885 0.6728756 13.007003 180-189
AAATC 803315 0.6708755 9.49492 110-119
TGCTA 856840 0.66968745 9.897983 50-59
GCTAC 1059670 0.6671256 10.510421 50-59
TTTAC 652445 0.65950435 14.473988 45-49
GCGAC 1350935 0.65761244 7.6308002 70-79
GTCTA 840450 0.65687734 11.128993 30-34
CGGAG 1396210 0.65240973 51.890156 6
GTTCC 940920 0.65170115 9.4076805 140-149
GATTA 733585 0.64699274 7.700937 160-169
CTGCG 1207515 0.64667636 16.060835 25-29
CCCTA 984845 0.6459081 13.160931 110-119
GAAGA 1034525 0.64125353 6.325134 15-19
GGAGG 1429305 0.64110416 14.430068 6
GTTCA 816830 0.63841647 10.396423 160-169
ATGCC 1008775 0.6350841 6.446577 50-59
TCAAC 842455 0.6234852 7.655655 110-119
GACTG 1019430 0.61606765 8.602442 1
GGGTT 964325 0.6154423 6.3239055 100-109
GGCAA 1112475 0.61108613 7.489711 80-89
CGCCG 1415935 0.61080456 8.935864 220-229
CCGTA 963265 0.60643286 5.774415 230-239
CCTAT 744175 0.6059174 7.205145 110-119
AAGAT 747250 0.5990403 5.314091 120-129
AGATG 877725 0.59855783 5.482151 120-129
ATTAA 576190 0.597389 6.3054075 110-119
GTAAT 668550 0.5896345 6.3971405 130-139
GACCA 1020610 0.5840337 5.8106713 170-179
TCAAT 624650 0.57392037 9.263524 110-119
GGTGA 986365 0.5721933 8.571189 9
GTAAC 804410 0.5714668 8.841746 120-129
AAGTA 710880 0.56988394 7.4383316 120-129
CTGAC 896765 0.56456715 8.9914875 220-229
GGGGA 1254695 0.56278414 9.651934 8
TGCGC 1039395 0.55664086 11.867924 25-29
GCGCT 1038135 0.5559661 11.2640295 25-29
TGCCA 875495 0.5511764 5.9871955 60-69
ACCTA 743455 0.55021715 5.952016 130-139
CTTTG 637490 0.54815656 6.1608334 120-129
CGTCT 781350 0.54117966 5.9216957 2
ACCCG 1057225 0.5361286 9.43349 140-149
TCCGG 990150 0.53026795 7.4417214 70-79
GACCG 1079580 0.5255214 6.8400574 220-229
CATAG 725355 0.5153048 7.0446835 120-129
AATGG 755500 0.51520735 7.710854 120-129
CACCG 1014080 0.5142493 7.118666 45-49
GGTTT 622070 0.5134576 6.6464944 100-109
CATGC 795550 0.5008462 9.454051 60-69
TGGTC 738365 0.49090898 8.5776825 8
GCATG 807440 0.48795667 9.770436 60-69
CCACG 959025 0.48633045 9.429876 180-189
TGGCC 890985 0.47716084 17.34241 2
TTGGT 574245 0.47398278 7.391195 120-129
CCATT 580745 0.47285047 5.3630137 110-119
CCGCG 1095160 0.47242898 6.5229354 220-229
GCCGC 1093170 0.47157055 9.937307 220-229
ATGGC 761275 0.46005803 8.801319 1
ACTTC 564205 0.45938337 27.346228 4
TTTGG 553905 0.45719412 6.0757093 120-129
GGTAA 664710 0.45329383 8.926525 120-129
CAGTC 714345 0.44972283 5.0218325 210-219
CCGGC 1022885 0.44125107 5.861888 70-79
CGCGG 1062915 0.44014078 6.125328 220-229
CATAA 526775 0.4399276 5.1004324 110-119
TATGT 453085 0.4396302 6.186876 140-149
GACGA 794465 0.43640223 8.615896 220-229
TTAGC 557820 0.43597993 6.6831536 45-49
ACGAG 792105 0.43510586 9.720941 180-189
CAATC 586890 0.4343464 7.269631 110-119
CAATG 581670 0.41322845 6.53287 120-129
CGGTG 801850 0.412213 7.6077695 8
TCACG 651835 0.4103691 5.6076016 160-169
CTCGG 762775 0.40849885 8.265029 6
CGAGC 834950 0.40643963 9.3673525 180-189
AGCTT 513340 0.4012153 7.143437 1
GGCAC 816180 0.39730272 6.0115633 35-39
ACCCC 744695 0.3934104 5.2269773 140-149
ACGAC 686600 0.3928999 8.415121 220-229
CGGCA 806800 0.39273673 5.9424396 70-79
TCACA 528910 0.39143643 10.135251 7
CGGTT 586545 0.38997 8.475238 160-169
CACTT 459200 0.37388688 6.7503247 3
TACTT 366840 0.37080917 9.45098 1
ACATT 402330 0.36965564 6.075952 110-119
TCGGT 543555 0.3613877 9.8347225 7
TGACG 596595 0.36053765 8.443955 220-229
ATCCC 540110 0.3542298 5.95383 110-119
TTTCT 310915 0.34575963 8.660383 4
GAGGC 723665 0.3381483 8.065468 35-39
TGGGC 638950 0.32846975 9.751039 1
GAGGT 566155 0.3284282 18.548843 7
CCTAA 441840 0.32699755 6.5458336 110-119
ATTCT 321250 0.3247259 7.765707 2
GCCTT 460695 0.31908715 8.129607 1
GCGAG 678885 0.31722388 7.4463334 240-247
CCGGT 590590 0.3162864 6.7052493 160-169
ACGAT 439980 0.31256944 6.3025703 160-169
TGCTG 435990 0.28987208 13.906015 1
TCCTA 345610 0.28140035 9.154185 9
TAACT 283845 0.26079315 7.043647 2
TTCCT 288685 0.25859573 6.7083015 4
AATCT 278900 0.25624973 7.0104065 2
GCTTT 295725 0.25428414 5.445293 45-49
TTCTT 227755 0.25327978 18.904484 1
AACCT 336860 0.2493038 6.1573157 2
CCTCG 435865 0.24317133 8.667371 5
TTGGC 364905 0.24261057 8.128848 1
TGTAA 274050 0.24170119 8.99021 25-29
GTAAG 334665 0.22822222 5.059828 25-29
CTCTT 252190 0.22590457 7.1261106 1
CCCTT 311850 0.22501294 5.7403502 3
AACTT 244235 0.22439997 9.623493 3
CGGGG 526125 0.2091299 9.189103 3
CTGGC 377335 0.20207916 5.016225 3
TGCCT 289215 0.20031646 5.331628 4
TGCTT 224070 0.19267039 9.636078 1
TCGCA 268020 0.16873461 10.595205 7
GACTT 207005 0.16179058 6.2909465 3
TAGGC 262305 0.15851764 9.323897 1
GTCTT 181630 0.15617764 7.889081 1
TTGCT 106560 0.09162743 5.702855 2