FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_6_SL248352.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_6_SL248352.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 11110160
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 54521 0.49073100657416274 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 39661 0.3569795574501177 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 38776 0.3490138755877503 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 38127 0.3431723755553476 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 37910 0.34121920836423597 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37115 0.33406359584380424 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37077 0.333721566566098 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 33769 0.3039470178647292 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 33540 0.30188584142802627 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33290 0.29963564881153826 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33287 0.2996086465001404 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 33269 0.29944663263175325 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33096 0.2978894993411436 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 32611 0.2935241256651569 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30916 0.2782678197253685 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 30416 0.27376743449239255 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 30286 0.2725973343318188 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 29920 0.26930305234128044 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 29670 0.2670528597247924 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28726 0.25855613240493386 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28696 0.2582861092909553 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28604 0.25745803840808773 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27777 0.25001440123274554 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 27284 0.24557702139303125 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26995 0.24297579872837116 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26479 0.23833140116793997 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24691 0.222238023574818 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24057 0.2165315350994045 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23664 0.21299423230628545 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23600 0.21241818299646448 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23395 0.21057302505094436 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22859 0.20574861208119416 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 22808 0.2052895727874306 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22604 0.20345341561237643 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22438 0.2019592877150284 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22406 0.20167126306011793 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22301 0.200726182161193 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 21573 0.19417362126198004 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21564 0.19409261432778646 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 21531 0.19379558890241005 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21441 0.19298551956047438 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21161 0.19046530383000784 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20142 0.18129351872520288 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 19884 0.1789713199449873 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 19744 0.17771121207975404 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 19584 0.17627108880520173 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19202 0.1728327944872081 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 18628 0.16766635223975174 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18385 0.16547916501652543 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 18372 0.16536215500046803 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 18371 0.16535315423000208 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 18266 0.16440807333107715 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18161 0.1634629924321522 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17920 0.1612938067498578 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 17784 0.16006970196648834 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17490 0.15742347544949847 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16589 0.14931378125967582 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16559 0.14904375814569726 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 15674 0.14107807628332986 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15585 0.14027700771186014 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15446 0.13902590061709283 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15185 0.1366766995254794 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14594 0.1313572441801018 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14265 0.12839599069680363 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14237 0.128143969123757 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13407 0.12067332963701692 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12781 0.11503884732533105 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12100 0.10890932263801782 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12040 0.10836927641006071 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 11558 0.10403090504547188 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 11281 0.10153769162640322 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 22895120 8.247547 67.40218 35-39
TGGAT 17266695 7.7232666 80.73977 35-39
TATTA 9883595 6.967136 144.52403 240-247
TCACC 17484540 6.8319287 77.55422 160-169
TCTCC 15297975 6.3431153 86.371704 20-24
AGTGG 17780705 6.1500306 41.08354 100-109
TCCCT 14666975 6.081479 73.85249 15-19
CTGTG 15072710 5.7617292 88.09449 25-29
CTGAG 15255220 5.495414 50.935875 15-19
TGGGT 14168020 5.2001643 46.443703 100-109
TGTAT 8980350 5.194558 67.01219 240-247
TTACT 8460350 5.0967965 126.884254 240-247
TTCAC 10297560 4.996125 77.4025 40-44
CTCCA 12518905 4.89165 42.407124 80-89
CTCTG 12206400 4.859624 75.07556 35-39
CCTGA 12844295 4.8188763 52.514565 15-19
ATTAC 8278630 4.699891 120.69045 240-247
ATTCA 8210820 4.6613946 116.716835 40-44
AAGGG 14200710 4.6286974 40.776363 90-99
TCTGG 11890255 4.5451965 137.43047 35-39
TGAGA 10602800 4.469231 97.10303 15-19
GAAGG 13675925 4.4576445 32.585773 150-159
ACACG 12480520 4.4125395 56.114563 230-239
TGGAG 12637985 4.371255 39.969933 90-99
CCAGG 15053625 4.367301 54.704323 80-89
GACAC 12250185 4.3311033 52.655613 230-239
CCCTG 13461135 4.3160543 86.18453 10-14
TCAGT 9239355 4.304147 97.32521 7
ACCAT 9408075 4.301502 70.84456 160-169
GAGAC 12643340 4.292043 91.001 8
ACTAC 9370930 4.284519 37.48837 130-139
TACTA 7447955 4.228306 30.636385 130-139
TACTG 9023875 4.203766 90.73504 240-247
TCCAG 11169180 4.1904125 41.772015 80-89
CACCA 11323750 4.1696515 60.181713 160-169
CAGCC 13786475 4.165612 57.175907 30-34
GGGTC 14038655 4.1497645 126.834854 8
AGCCT 11021985 4.1351886 52.745934 30-34
CACCT 10394440 4.0615344 44.866467 20-24
AGACT 9058255 3.9765859 70.98818 15-19
GACTC 10597115 3.9757876 52.834396 20-24
GATTC 8495065 3.9574196 60.723705 40-44
CTGGG 13361440 3.9495828 133.77109 3
TGAAG 9236470 3.8933034 41.905807 150-159
CAAGA 9336430 3.862487 47.91388 180-189
ACTGG 10497180 3.781417 45.45512 60-69
GCTGG 12759660 3.7716994 33.86061 90-99
CCTGT 9205195 3.6647816 61.870056 25-29
ACTGT 7862975 3.6629612 78.44511 240-247
ACTCT 7461305 3.6200438 69.677734 20-24
GAGTG 10414915 3.6023345 39.87644 90-99
GTATT 6156460 3.5611186 77.0819 240-247
GGATT 7881400 3.5252926 57.98979 40-44
TCCTG 8785370 3.49764 63.513283 20-24
GGACA 10136685 3.4411073 31.576645 220-229
CTCCT 8271495 3.4296727 93.10643 20-24
GGTCC 11068700 3.4075968 142.86864 9
TATCT 5653140 3.4056396 53.862354 200-209
AGACA 8201460 3.3929493 40.63235 170-179
AGCTG 9256275 3.3344035 38.377373 60-69
GTCTC 8263965 3.290058 34.15574 30-34
CATCT 6769220 3.284261 34.122288 170-179
CTGCA 8743400 3.280317 46.883427 25-29
CCATC 8338150 3.258058 36.815495 45-49
GTCCC 10114535 3.2430308 75.47427 10-14
GGAGT 9253995 3.2007923 38.384666 90-99
CCTCA 8190665 3.2004297 82.006645 5
AGTAG 7504995 3.1634622 30.563597 50-59
AGGGA 9533880 3.1075523 42.14069 80-89
AAGAA 6375040 3.0860255 41.23308 180-189
GGAAG 9121645 2.9731843 31.629936 80-89
GTGAA 6954330 2.931349 40.871033 150-159
GAGCT 8104500 2.919498 31.31825 60-69
GGCTG 9852430 2.912335 35.033264 90-99
ACCTT 5975485 2.89916 73.099174 40-44
CAGGG 10398525 2.8966105 37.450153 80-89
GACAA 6911025 2.8590956 26.423124 180-189
CTATG 6116265 2.8492577 28.546711 50-59
ATCTC 5832205 2.829644 50.40125 170-179
TGTGC 7374140 2.818856 58.449326 25-29
GGGAA 8592140 2.8005934 35.20634 80-89
ATCTG 5780950 2.6930513 40.190014 200-209
GAGTC 7467025 2.689859 29.663113 150-159
ATCAG 6098005 2.6770322 28.933504 45-49
CGCCA 8822435 2.6657174 40.537495 70-79
GAACA 6413710 2.653356 39.193356 210-219
CCCTC 7908435 2.640884 27.40805 20-24
AGAAC 6369305 2.634986 33.243656 190-199
ATGAA 5105630 2.6226811 30.73281 210-219
AGGGC 9377975 2.6123266 33.826492 150-159
CAGTG 7247295 2.6107054 75.225136 8
AGGCT 7194190 2.5915754 20.587221 80-89
CCAAG 7275960 2.5724456 41.803257 180-189
TGCAA 5853600 2.5697381 38.712032 200-209
CTACA 5582810 2.5525382 20.206987 190-199
CACTG 6698705 2.5131958 20.67906 30-34
GTGGA 7265015 2.5128398 27.572737 100-109
CTACT 5172190 2.5094209 23.695408 50-59
CTGTC 6284535 2.5020053 50.483067 30-34
GCAGC 8598795 2.49465 35.414413 30-34
TATAT 3496225 2.4645557 28.305511 240-247
TATGC 5259610 2.4501853 21.967194 50-59
GTGTA 5456405 2.4406104 41.002495 230-239
CTCTC 5875790 2.4363232 98.20317 20-24
GGGCT 8194340 2.422211 43.01985 90-99
CTTCA 4982485 2.4173806 51.405636 45-49
GTGGT 6477725 2.3775542 32.29261 120-129
CAGTA 5410620 2.3752694 22.588276 45-49
TCCAA 5189700 2.3728027 46.18066 180-189
TGGTG 6457785 2.3702354 35.475246 35-39
CAGGC 8157740 2.3666925 33.88241 70-79
GCTCC 7275640 2.332794 34.5165 80-89
CCGCC 9029755 2.3316925 34.41628 70-79
GCCTC 7242585 2.3221958 71.75274 4
GTAGT 5157505 2.3069143 26.832722 120-129
GTATC 4947380 2.3047335 25.000166 200-209
ACAAC 5346165 2.303468 21.371742 180-189
CACGG 7906785 2.2938864 49.672787 230-239
TGAAC 5191335 2.2790031 42.07734 210-219
GCTAT 4862060 2.2649872 35.06654 50-59
TCTGT 4560920 2.2546413 26.85441 210-219
CAAAT 4203420 2.2488089 38.33834 200-209
TATCA 3937125 2.2351596 18.420523 170-179
CCTTC 5375595 2.2289238 55.56453 45-49
ACAGC 6304285 2.228906 29.618086 210-219
TACAT 3906175 2.217589 19.068853 190-199
GTGGG 7806750 2.215719 30.515333 100-109
GGGGG 9987060 2.1918888 95.28628 5
TGCAG 6071180 2.1870315 44.70393 30-34
ACGGC 7472390 2.1678615 54.822636 230-239
AACTA 4051430 2.167495 38.904934 130-139
AATGA 4208485 2.1618319 28.959389 210-219
AAATG 4206560 2.160843 36.25281 200-209
CCTCT 5207715 2.1593146 49.64327 35-39
TGCAC 5688200 2.1340785 27.879196 25-29
GGCCG 8957300 2.1323826 27.317595 230-239
GCAGA 6264215 2.1265175 25.676537 140-149
TCTAT 3501425 2.1093748 21.197554 110-119
CTCAC 5386210 2.1046135 56.23396 20-24
TGGTA 4684940 2.0955396 32.28517 120-129
AGCAC 5910790 2.0897841 22.108835 130-139
GGCTC 6780455 2.0874228 20.876936 40-44
ATATC 3661740 2.07882 14.578409 160-169
TCCGC 6438605 2.0644147 42.620007 70-79
GCCTG 6662150 2.0510015 32.682278 210-219
CAGAG 6031770 2.047609 34.157627 170-179
TTCAG 4383940 2.0422552 48.138245 45-49
AGAGT 4821000 2.03212 32.37303 150-159
CATAT 3578910 2.031796 15.376967 160-169
GGTCT 5244985 2.0049603 35.380795 15-19
ATGGA 4738965 1.9975411 12.403396 100-109
GGATC 5533155 1.9932177 18.942364 70-79
TCTCT 3857930 1.9862455 33.83325 35-39
GCCAG 6835235 1.9830126 36.148468 70-79
TCCAT 4071245 1.975269 28.37191 45-49
AACAG 4752950 1.9662986 37.56477 210-219
ACTAT 3457155 1.962674 17.816353 130-139
GCTGT 5130415 1.9611645 21.871319 230-239
TGAGC 5444025 1.9611102 18.917118 200-209
CAGAC 5508720 1.9476306 27.771587 140-149
GGTGG 6860565 1.9471719 18.893875 40-44
CCAGA 5467815 1.9331688 35.821327 170-179
GCACA 5461790 1.9310386 19.455585 130-139
GTCAC 5145850 1.9306015 39.49669 160-169
TGGGG 6801525 1.930415 124.218346 4
TGGGA 5562990 1.9241396 16.818495 100-109
ACCCT 4916380 1.9210316 44.486965 10-14
GATGG 5551965 1.9203262 20.768034 100-109
CTATT 3160745 1.904138 21.204897 110-119
ACCAG 5385365 1.9040178 14.983492 190-199
CCTGC 5934080 1.9026487 49.68329 20-24
ATACT 3348515 1.9009979 28.45791 130-139
AGAGA 4777495 1.8977233 29.948854 170-179
TAGTG 4241215 1.8970647 27.500242 120-129
TGTGA 4236015 1.8947388 20.75538 210-219
CTGTA 4060560 1.8916088 26.242794 190-199
TAGTA 3463700 1.888061 18.083158 120-129
CAGTT 4046855 1.8852245 26.531885 190-199
TCAGC 5006610 1.8783619 11.827562 45-49
TGTCT 3783110 1.8701394 51.58382 30-34
TTCCA 3817690 1.8522503 24.295458 180-189
AGTCA 4210600 1.8484589 30.694607 160-169
AGCTA 4203685 1.8454232 27.04007 50-59
TACAA 3447990 1.8446575 19.045366 130-139
CAAGG 5427665 1.8425331 17.501982 80-89
CATGA 4149085 1.8214538 24.54352 60-69
CCGTG 5880430 1.8103422 21.988266 230-239
CACAG 5090875 1.7998997 16.295118 140-149
GTGCA 4984075 1.795422 51.66091 25-29
ACCTG 4771120 1.7900114 31.540031 25-29
ATGCA 4010365 1.7605556 16.813793 60-69
ATTGG 3931750 1.7586432 21.705782 100-109
CTCAG 4679555 1.7556584 78.47606 6
AGTTC 3763815 1.7533704 23.56188 190-199
CCTGG 5664895 1.7439879 35.483147 2
GCCGA 5988370 1.7373233 21.436462 220-229
GGATG 4998900 1.7290308 22.2103 100-109
GCTGA 4772445 1.719186 28.563747 200-209
GGAGC 6168950 1.7184212 13.580539 200-209
GCAAA 4134610 1.7104911 35.100563 200-209
TTCTG 3446885 1.7039301 42.52501 30-34
AGTTA 3072140 1.6746218 17.128418 50-59
AGGAC 4919280 1.6699513 23.01676 220-229
AGGGG 6238960 1.6686952 33.6154 90-99
CAGCT 4447230 1.6684958 13.261229 50-59
TCTCA 3437515 1.6677986 27.644794 100-109
AACAC 3849050 1.6584157 24.462917 190-199
GCACT 4415645 1.656646 27.046543 25-29
CGATT 3550355 1.6539304 36.42336 160-169
GGGGC 7187160 1.6428267 29.077892 90-99
TGACC 4364435 1.637433 15.250994 210-219
CTGAA 3707340 1.6275271 25.180014 200-209
GGGCC 6818520 1.6232228 27.963484 2
GAGGA 4912950 1.6013678 30.065022 220-229
ACAAT 2973690 1.5909094 25.062536 180-189
TTAGT 2728445 1.5782309 26.719845 110-119
AGTGA 3734090 1.573972 87.76608 9
CGTCC 4892555 1.5687035 20.127998 180-189
GTTAC 3364280 1.5672475 16.831928 50-59
GGCTT 4095090 1.5653987 21.514519 25-29
CTTTA 2598280 1.5652902 43.498104 45-49
CCATG 4168245 1.5638274 16.123898 160-169
GTCCG 5069580 1.5607147 34.629383 70-79
TCTGC 3899675 1.5525424 35.904 200-209
CATCA 3387775 1.5489378 33.290897 45-49
CTCCC 4587595 1.5319473 14.401668 190-199
GTTCT 3090000 1.527508 24.5515 190-199
TAGCA 3464645 1.5209838 12.450586 130-139
TTCTC 2923200 1.5050021 23.20113 190-199
GAGCA 4419535 1.5003027 8.019748 200-209
CTGGT 3924325 1.5001216 32.608185 35-39
TACGC 3970425 1.4896098 25.473173 140-149
CTCAA 3254290 1.4879065 19.79807 150-159
ACTCC 3803345 1.4861233 17.794132 140-149
GGCAG 5204955 1.449891 13.8257 150-159
CAACT 3154695 1.4423704 18.718096 130-139
CAACC 3903425 1.4373262 16.137323 140-149
TCTGA 3085195 1.4372357 23.459795 220-229
GGGGT 5033445 1.4285969 119.33788 7
AACCC 3871245 1.4254769 21.400436 140-149
GTCCA 3793855 1.4233648 30.455624 180-189
CTACG 3762395 1.4115618 16.7399 130-139
ATCTA 2486065 1.411373 22.067083 110-119
GCCGT 4505320 1.3870025 32.298965 230-239
AAGCT 3143120 1.3798338 18.372208 200-209
TCAAG 3141120 1.3789558 24.874786 150-159
CCATA 3006000 1.374385 15.81231 160-169
GAACT 3128345 1.3733475 15.807294 190-199
TGGAA 3250755 1.3702395 20.145031 120-129
GTGGC 4632110 1.3692315 14.975808 40-44
TTACA 2410225 1.3683176 10.282779 120-129
AGCAG 4014130 1.3626795 13.295008 50-59
CCTTT 2645835 1.3622016 49.7807 45-49
TGTCC 3418155 1.3608394 55.174328 15-19
CAATT 2394195 1.3592172 26.092329 180-189
CACGT 3617340 1.3571407 17.78708 180-189
AAGAG 3414205 1.3561953 20.439768 150-159
ATACA 2532910 1.3550943 22.527708 35-39
GGCCT 4355970 1.3410237 68.856224 3
ACATA 2505705 1.3405397 22.383015 130-139
ACAGT 3045305 1.3368928 12.900161 120-129
GTGAC 3701100 1.3332535 16.473394 210-219
ATCCG 3551400 1.3324015 25.00804 70-79
GATTG 2965170 1.326299 25.000925 100-109
AATTC 2332025 1.3239224 26.054539 180-189
TCCGT 3296685 1.3124794 14.272722 150-159
AGACC 3688010 1.3039111 103.51567 9
ACAGA 3135985 1.297359 20.73171 140-149
CGACA 3655020 1.2922475 16.565931 70-79
CCAGT 3443030 1.2917438 20.355497 190-199
AACCA 2988995 1.2878492 18.858885 190-199
CGGCC 5186120 1.2858319 34.193172 230-239
TCACT 2645440 1.2835032 14.323888 190-199
ACATG 2892295 1.2697213 14.910583 190-199
GTGCG 4285315 1.2667204 19.377901 240-247
AGTCG 3508215 1.2637702 17.044146 150-159
ACGTC 3358100 1.25988 19.64199 180-189
TGCGA 3494630 1.2588764 16.476665 240-247
GATCC 3348795 1.2563889 24.816557 70-79
CTTCT 2432655 1.2524463 22.802963 30-34
ATTAG 2270185 1.2374766 26.541262 110-119
GAGAG 3793795 1.236581 29.35055 220-229
TACCA 2695120 1.2322463 10.934 45-49
CCTAC 3146940 1.2296388 17.474808 190-199
TGGAC 3406725 1.2272103 16.101957 80-89
CTTCG 3076340 1.2247555 107.474915 3
ACGCA 3455865 1.2218354 22.13533 140-149
TCGGA 3391025 1.2215546 96.647736 5
GTCGA 3376195 1.2162124 13.260316 150-159
GAAGT 2874560 1.2116679 14.03842 140-149
ATCAT 2131500 1.2100816 16.218529 110-119
TGAGT 2699630 1.2075248 21.15483 90-99
GGACT 3316595 1.1947426 13.683693 90-99
ATTAT 1689700 1.1911018 9.641848 50-59
TTGGG 3213920 1.179622 15.964649 100-109
GCAAG 3462450 1.1754004 16.899723 25-29
CGTGT 3066760 1.1723069 26.314316 230-239
ACACA 2719230 1.1716173 7.7171526 130-139
TCGAG 3238005 1.166432 12.870125 150-159
TTCGG 3049450 1.1656898 103.225006 4
AAGGC 3432755 1.1653197 29.277872 25-29
AGAGC 3432505 1.1652348 28.209093 220-229
ATTCC 2383150 1.1562464 23.908203 180-189
GGGTG 4066330 1.1541095 14.398356 60-69
ATATT 1625675 1.1459695 29.94031 240-247
CCGAT 3032920 1.1378802 24.546349 160-169
TAGAC 2587250 1.1358062 18.749166 170-179
TGTGT 2385995 1.1325072 16.349386 240-247
AGGTC 3143395 1.1323504 18.492466 10-14
GCCCC 4380660 1.1311882 12.451379 80-89
CGCTG 3670765 1.1300774 13.278166 190-199
AGGCC 3869750 1.1226773 14.604365 2
GACCC 3713170 1.121942 43.655678 10-14
GCTTC 2816400 1.1212679 27.624252 2
GCACC 3710395 1.1211036 11.752357 130-139
ACAAG 2702120 1.1178688 18.013746 80-89
GAACC 3149230 1.1134232 11.305515 180-189
CGGCT 3616275 1.1133021 23.57789 230-239
AGCTC 2961425 1.1110568 13.556344 210-219
CTTGA 2379110 1.1083066 22.430876 90-99
TTATT 1480710 1.1076152 19.37801 240-247
TAGTT 1914650 1.1075026 16.011343 50-59
CACAT 2417440 1.1052871 14.726809 130-139
TTGAG 2462430 1.101427 20.88616 90-99
CCCCT 3297750 1.1012261 10.033811 140-149
ATCAA 2053705 1.098722 13.047711 110-119
CTATA 1932200 1.0969363 13.990061 50-59
CGCAG 3780020 1.0966451 17.308651 140-149
ATGAG 2580925 1.0878966 21.146873 60-69
ATGGG 3144030 1.0874642 19.829775 100-109
GAAGC 3193235 1.0840096 14.393544 200-209
TGGCT 2834455 1.0835054 32.730274 40-44
GTAGC 3007200 1.0832887 11.716202 50-59
TACAG 2445355 1.0735141 9.567429 120-129
ATGGT 2396615 1.0719885 9.895456 35-39
GGAGA 3288235 1.0717946 87.269325 7
CAGCA 3019925 1.067707 12.722526 45-49
GTATA 1953455 1.0648273 11.417152 240-247
CTCCG 3310660 1.0614994 10.116175 140-149
CGTGA 2936365 1.0577717 21.530014 150-159
TTTAG 1814410 1.0495201 31.58747 45-49
GGGAG 3919710 1.04838 14.1587925 5
GATCT 2237375 1.0422795 10.248361 220-229
GTAGA 2436130 1.0268635 18.55472 170-179
TTATA 1455760 1.0261931 14.045544 110-119
CGAGT 2835170 1.0213182 15.85474 160-169
AAACT 1908730 1.0211611 17.627111 130-139
AAGGT 2419330 1.019782 20.67412 15-19
ACCAA 2360870 1.017213 18.262789 130-139
TTTCA 1685170 1.0152024 7.4249196 100-109
GACAG 2984120 1.0130212 15.932157 70-79
CCAAC 2721465 1.0021027 14.951549 130-139
GCCAA 2830345 1.0006802 15.735303 180-189
ACTCA 2187495 1.0001531 13.339464 190-199
ATGAT 1813425 0.988497 9.375319 120-129
CATAC 2158750 0.9870105 14.991139 130-139
ACACC 2673170 0.9843195 12.98892 40-44
AGATC 2216730 0.97314745 13.401664 210-219
GGGAC 3477605 0.9687208 10.488381 90-99
GATAC 2205935 0.9684084 24.094269 35-39
GCTCT 2430510 0.967637 19.1066 210-219
ATGAC 2202455 0.96688074 11.337975 160-169
AACTC 2114320 0.96669644 17.52341 190-199
AGCCC 3177955 0.96022576 11.933062 80-89
TCATA 1690585 0.9597682 9.26251 110-119
TATGG 2145250 0.9595547 12.7143345 35-39
CAGAA 2317395 0.9587078 18.769024 140-149
GGTAT 2134770 0.95486706 9.648381 110-119
GCAGT 2639250 0.9507416 6.4833884 50-59
GCCAT 2529480 0.9490013 8.088498 60-69
CCGTC 2948250 0.9452997 10.365331 140-149
AATCA 1765775 0.94468087 14.624628 110-119
ACAGG 2777735 0.9429596 15.499642 70-79
AAGTT 1713005 0.93375814 18.155897 140-149
TGGTT 1963660 0.93204683 9.454892 50-59
AACTG 2120635 0.93096155 11.950862 60-69
GAGCC 3207610 0.9305797 20.371244 220-229
CCCAG 3078725 0.93024325 15.2656 80-89
TAACA 1736760 0.92915803 8.790581 120-129
TACAC 2026965 0.92675656 22.364489 35-39
CCCCA 2912430 0.9165047 17.39093 80-89
GGTAG 2648440 0.9160484 12.707187 120-129
GTTAT 1562780 0.90396833 11.310103 110-119
CGGAG 3215065 0.8955878 74.64858 6
AGCCG 3085715 0.8952159 21.313147 220-229
ACCGC 2949600 0.8912278 12.050716 220-229
GACTG 2469655 0.88964796 13.341799 90-99
CGAGG 3187805 0.8879942 16.296303 220-229
AGAAG 2232350 0.8867372 16.51555 140-149
TGAGG 2561800 0.8860812 12.753861 220-229
ATAGT 1623930 0.8852034 16.284122 120-129
TCCTT 1683585 0.86678946 10.523694 45-49
GATCA 1956460 0.8588885 9.302888 110-119
ACGCT 2273360 0.85291106 16.592104 190-199
GATGA 2017705 0.85049134 6.8266444 60-69
TGGCA 2349460 0.84635 5.879121 100-109
GGTTC 2211960 0.845549 11.862047 160-169
GTTTC 1710080 0.84535944 5.130613 100-109
CCGAG 2908685 0.84385675 19.944893 220-229
ATCCA 1845400 0.8437425 9.9546995 180-189
CGGAC 2904770 0.8427209 11.405454 220-229
TCTTC 1620845 0.834488 46.795242 2
GCTTG 2180805 0.8336396 17.01248 90-99
CTATC 1700565 0.82507277 8.160258 110-119
GGTGC 2787065 0.8238442 11.593823 60-69
ATATG 1504720 0.8202221 5.947608 50-59
TTACC 1689120 0.81951994 9.668118 45-49
TCATC 1686440 0.81821966 10.418235 110-119
GAGAT 1926525 0.8120577 12.748777 210-219
GCCTA 2154670 0.8083813 16.875532 190-199
CGTAT 1734430 0.807983 8.413258 240-247
AGTCT 1733210 0.80741465 14.765791 8
TATAC 1414800 0.80320126 9.407572 130-139
ATATA 1208230 0.8026188 11.383164 130-139
TTTAT 1067425 0.7984656 10.305716 240-247
CATGG 2205530 0.7945018 8.961925 200-209
TTATG 1368605 0.7916505 11.349723 50-59
ACATC 1723595 0.78805155 6.003204 110-119
TGATG 1760230 0.7873381 12.098827 120-129
GTCTA 1685815 0.78533566 10.3563175 30-34
GTCTG 2051590 0.7842456 14.440106 3
GTTCA 1681170 0.78317183 14.487419 160-169
GGTTA 1741450 0.77893794 8.439479 50-59
CCTCC 2324840 0.77633977 10.925977 140-149
ACAAA 1535480 0.77413076 13.216541 130-139
CATTA 1347450 0.7649658 12.7015915 110-119
CCAGC 2497790 0.7547125 6.3331094 80-89
ATGCC 1999535 0.75017834 8.496921 50-59
GGGAT 2146530 0.7424466 13.178334 100-109
TTGGA 1658860 0.74199593 6.481558 60-69
AACGC 2085845 0.7374591 15.5934725 180-189
TGCCA 1960265 0.7354451 7.7671695 60-69
TCAAC 1607575 0.7350056 7.802439 110-119
TATTT 978125 0.7316666 9.418024 240-247
TCCGG 2369670 0.7295237 12.067899 70-79
ATAAA 1158130 0.72499895 8.254707 130-139
CATCC 1840705 0.7192391 6.7443113 110-119
TATAG 1316155 0.71743536 6.518826 120-129
CAACG 2021665 0.714768 15.872611 180-189
GGATA 1681240 0.70866656 15.385982 35-39
ATCTT 1169460 0.70452166 12.728396 3
GAAAT 1371015 0.7042687 7.5635853 110-119
GGGCA 2498825 0.6960721 13.81827 150-159
ACGCC 2302385 0.6956704 13.752554 180-189
AATAC 1291735 0.69107175 11.898018 130-139
CAAAC 1595360 0.6873826 14.167039 130-139
CCCCC 2548930 0.68549895 13.502501 80-89
GATTA 1255805 0.6845386 5.640881 50-59
GACCA 1913840 0.67664605 6.303604 170-179
TTTAC 1118690 0.673936 13.084002 45-49
CACAA 1560640 0.67242295 8.467369 130-139
AGGCA 1971325 0.6692071 6.73081 80-89
GCGAC 2271920 0.65912086 7.1127906 70-79
AAATA 1044145 0.65364337 13.261952 130-139
TATTG 1127995 0.652473 5.971581 240-247
GACCG 2243490 0.6508728 10.081435 210-219
GCGGA 2335790 0.6506571 9.564077 220-229
CTGAC 1723940 0.6467816 10.035584 220-229
CCCGT 2005410 0.6429962 10.148118 140-149
ACTTC 1322500 0.64164484 30.858486 4
TCAAT 1120055 0.6358705 8.690506 110-119
TAGCT 1358095 0.6326676 12.939661 50-59
CACGC 2086645 0.63048416 13.395972 190-199
CAGTC 1669410 0.6263232 5.8194337 210-219
AATAA 990710 0.6201926 7.7507277 130-139
AGATG 1465170 0.61759 5.970681 120-129
AAGCA 1481790 0.6130175 6.158922 120-129
CGCCG 2464450 0.6110288 11.684367 220-229
TCCAC 1544270 0.6034097 10.444621 180-189
CCCTA 1540490 0.60193276 11.976448 110-119
TTAGC 1288080 0.6000511 10.135251 45-49
AGTAA 1167395 0.5996723 5.0711317 50-59
CCGGC 2410930 0.5977592 9.683036 70-79
ACCTA 1307080 0.59761506 7.4164014 130-139
TTTCT 923295 0.5902405 9.604459 4
AATGG 1382375 0.58269066 6.678545 120-129
GGCCC 2321670 0.5756283 10.198016 70-79
CACGA 1625565 0.5747252 8.999453 180-189
CACCG 1877230 0.5672089 9.183308 45-49
CGGCA 1946050 0.5645807 11.313355 70-79
TCAGG 1564635 0.5636311 5.5182333 150-159
GCCGC 2267800 0.56227195 12.782453 220-229
TGATT 969095 0.5605595 6.050405 50-59
CGGTT 1464290 0.5597429 11.749912 160-169
GTTCC 1405535 0.55957305 6.825771 140-149
GACGA 1630525 0.55351543 10.096749 220-229
GGTGA 1590255 0.550041 6.2502556 120-129
TAATA 820405 0.54498935 8.361787 130-139
GCTAC 1449095 0.54366624 8.010549 50-59
TACTT 893320 0.5381657 12.138821 1
ACCCG 1774775 0.5362519 9.02104 140-149
GGGGA 1996990 0.5341223 8.609267 4
CTTTG 1071860 0.52986234 7.0884976 45-49
CCTAT 1087200 0.527483 5.084711 110-119
GTCCT 1324725 0.5274008 6.4203773 45-49
AAGAT 1021400 0.524677 5.6004376 15-19
AAATC 974815 0.52152115 8.154708 110-119
CCGTA 1387775 0.52066046 7.457761 230-239
TTCAA 905625 0.5141356 5.547868 200-209
AAGTA 974355 0.5005107 5.0412955 120-129
CTGCG 1622200 0.4994085 11.93594 25-29
AGTTT 862080 0.49865812 5.103527 140-149
ACCCC 1584410 0.49859363 9.396083 140-149
ACATT 870230 0.49404144 6.28943 110-119
GGAGG 1823540 0.48773068 5.642866 6
GAAGA 1226850 0.4873311 6.184212 15-19
CCACG 1606345 0.48536053 7.816467 180-189
GTAAC 1104815 0.48501527 6.920434 120-129
ACGAC 1368750 0.48392722 9.476311 220-229
ATTTC 803140 0.48383826 5.8817935 240-247
GGGTA 1398730 0.48379585 5.406288 100-109
TATGT 836190 0.48368242 6.849199 140-149
GGGTT 1308100 0.4801189 5.650169 100-109
TGGCC 1525270 0.4695678 14.732206 2
AGTAT 857760 0.46756452 5.3681607 110-119
ATTAA 703350 0.46723047 6.4037185 110-119
TATCC 962460 0.4669622 5.3512063 110-119
TAAAT 695115 0.46176 8.348319 130-139
CCGGT 1492815 0.45957625 9.152315 160-169
ATGCT 985110 0.45891282 7.047949 50-59
CAATC 1000750 0.45755678 6.5341506 110-119
CATAA 847545 0.45343235 6.269371 110-119
TGCTA 954645 0.44472066 6.2830925 50-59
CCATT 916060 0.44445005 5.0996947 110-119
AACAT 830440 0.44428128 6.110603 110-119
GGTTT 929355 0.44111627 5.38114 100-109
TGCGC 1383500 0.42592266 8.950792 25-29
GCATG 1171435 0.42198804 8.4603615 60-69
TTGGT 886910 0.42096978 5.1146393 120-129
GCGCT 1359530 0.4185433 8.206473 25-29
GGTCA 1152960 0.41533276 5.332804 160-169
TGACG 1151160 0.41468436 9.066755 220-229
ATTCT 682765 0.41132036 7.028555 2
CGCGG 1725240 0.41071218 6.7093797 220-229
CTAAC 885050 0.40465716 5.6138396 110-119
CACTT 815085 0.39545938 7.2491655 3
ATGGC 1092765 0.39364856 6.8174872 1
CATGC 1046410 0.39258835 6.996731 60-69
GCCTT 977765 0.3892688 9.120605 1
GGTAA 922445 0.3888237 7.2327266 120-129
CCTAA 846375 0.38697442 7.7155 110-119
ACGAG 1115100 0.37854376 8.000794 180-189
CAATG 855600 0.37560952 5.0269823 120-129
CCGCG 1508525 0.37401944 6.9898286 220-229
AGCTT 801375 0.37331995 7.6002293 1
TTTGA 628185 0.36336482 5.99307 45-49
TACCT 739925 0.35899362 5.289317 2
GAGGC 1206805 0.33616734 5.79523 35-39
TGGGC 1126260 0.33291754 9.409841 1
TTCTT 512340 0.32752675 19.978384 1
CGAGC 1096075 0.31798914 6.6978197 180-189
CGGTG 1074685 0.3176722 5.0031257 8
TGCTG 826825 0.31606406 13.801062 1
ATGTG 662030 0.2961212 5.1958027 140-149
CGCTT 732325 0.29155397 5.885024 1
GACTT 610310 0.2843125 6.955581 1
AACTT 499925 0.28381425 10.948558 3
AACCT 616845 0.2820301 6.071647 2
CTCTT 539605 0.27781427 9.8035555 1
TCACA 572450 0.2617321 5.6965714 5
GCGAG 929035 0.25879177 6.013077 240-247
CTCGG 812875 0.25025073 5.5214167 6
CCGCA 823310 0.24876486 5.01331 220-229
GAGGT 715575 0.2475047 7.188325 7
TTGGC 645565 0.24677515 7.3300753 1
TAACT 424140 0.24079008 7.279627 2
TTCCT 467250 0.24056248 6.516812 4
GTCTT 464795 0.22976635 11.412905 1
CCCTT 548915 0.22760083 5.353454 3
ATTGT 387835 0.22433773 5.0098057 240-247
AATCT 392355 0.22274528 7.443992 2
TGTAA 402530 0.2194189 7.6483164 25-29
CGGGG 934890 0.21369529 8.378943 3
CCTCG 645835 0.20707458 6.012205 5
TGCTT 418820 0.20703912 11.052171 1
TCGGT 483375 0.18477605 6.475352 7
TGCCT 459035 0.18275146 5.062 4
TCGCA 415010 0.15570194 5.567012 7
TAGGC 425200 0.15317051 7.225421 1
TTGCT 209090 0.10336137 5.6031055 4