FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_15_SL248344.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_15_SL248344.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 9845937
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 41638 0.42289525110713183 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 34802 0.35346559702748453 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 34599 0.3514038328703505 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33461 0.3398457658219832 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 32972 0.3348792501922367 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30261 0.3073450500445006 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 28818 0.292689258523592 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 27679 0.2811210350015443 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27383 0.2781147187921271 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 26918 0.2733919585307117 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26912 0.2733310196886289 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26357 0.2676941767959718 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25507 0.25906117416757796 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25362 0.2575884854839108 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24757 0.25144381890723044 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24749 0.25136256711778676 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24630 0.2501539467498116 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24399 0.2478078013296246 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24368 0.24749295064553026 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24154 0.2453194652779111 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23520 0.23888026096449733 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23106 0.23467548086078552 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23016 0.23376139822954384 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22636 0.22990193823096777 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21483 0.21819152407739356 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 21168 0.21499223486804758 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21060 0.21389533571055755 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20550 0.20871553413352126 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 20179 0.2049474823980694 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19970 0.20282477939885254 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19858 0.20168725434664067 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19345 0.19647698334856298 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19256 0.19557305719100174 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19159 0.1945878792439968 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19104 0.19402927319157132 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18557 0.18847368208835788 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18440 0.18728537466774364 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 18421 0.18709240166781485 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 18263 0.18548767882630166 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18240 0.185254079931651 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17648 0.1792414475128167 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17408 0.1768038938295055 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17072 0.17339131867286983 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17026 0.1729241208835685 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16852 0.1711568944631679 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 16611 0.16870918430617624 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16449 0.1670638355699412 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 15793 0.16040118883555726 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 15787 0.16034024999347446 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 15542 0.15785191394176093 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15472 0.15714096078412854 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 15300 0.15539404731108883 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14589 0.14817279452427942 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14352 0.1457657102620096 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14306 0.14529851247270828 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14058 0.1427797069999534 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 13983 0.14201797147391865 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13913 0.1413070183162862 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13597 0.13809757263325978 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12999 0.13202400137234271 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12877 0.1307849115833262 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12640 0.1283778273210564 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12273 0.12465040148032636 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11717 0.11900340211398876 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10694 0.10861332953887477 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10605 0.10770940338131352 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 10037 0.10194052633081035 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 19713435 8.10526 66.82313 35-39
TGGAT 14859405 7.5383554 78.89131 35-39
TCACC 15085150 6.783749 77.566795 160-169
TATTA 8531540 6.782873 142.65154 240-247
TCTCC 13317135 6.363212 87.03595 20-24
TCCCT 12638335 6.038867 72.568504 15-19
AGTGG 15193935 5.9733396 40.615616 100-109
CTGTG 13093575 5.720163 86.897156 25-29
CTGAG 13271060 5.456451 50.364594 15-19
TGGGT 12280990 5.130099 45.96603 100-109
TGTAT 7780870 5.09368 66.69436 240-247
TTCAC 8905010 4.9411163 74.50107 40-44
TTACT 7211415 4.9372115 124.69486 240-247
CTCCA 10818130 4.8648825 41.908047 80-89
CTCTG 10549805 4.8200583 73.04614 35-39
CCTGA 11201975 4.8167825 52.102505 15-19
ATTCA 7170765 4.6204176 112.93477 40-44
ATTAC 7135385 4.597621 118.968636 240-247
TCTGG 10411660 4.54852 133.85768 35-39
AAGGG 12281075 4.543995 39.672523 90-99
TGAGA 9269385 4.425687 95.13375 15-19
GAAGG 11816830 4.3722243 32.405426 150-159
ACACG 10729320 4.341993 56.33417 230-239
CCAGG 13004425 4.333365 53.424835 80-89
CCCTG 11652390 4.3147173 85.450775 10-14
GACAC 10597170 4.288514 53.142612 230-239
GAGAC 11042020 4.2727523 86.91162 8
TGGAG 10863705 4.270954 38.94934 90-99
ACCAT 8096135 4.227883 69.85432 160-169
TCCAG 9739560 4.1879525 41.149754 80-89
TCAGT 7882035 4.1818776 93.53911 7
CAGCC 11941920 4.1616545 56.0196 30-34
GGGTC 12246920 4.146186 125.20201 8
ACTAC 7895050 4.1228743 36.329044 130-139
CACCA 9726725 4.116625 59.83347 160-169
TACTG 7756150 4.1150885 89.53461 240-247
AGCCT 9568120 4.1142344 51.470123 30-34
TACTA 6260635 4.0339837 29.432375 130-139
CACCT 8949055 4.0243645 44.64605 20-24
GACTC 9275835 3.9885535 52.389114 20-24
CTGGG 11687760 3.9568825 132.57645 3
AGACT 7907455 3.9484277 69.95342 15-19
GATTC 7425020 3.9394042 59.057117 40-44
TGAAG 8010775 3.8247604 41.5951 150-159
CAAGA 7951545 3.7367454 46.871933 180-189
GCTGG 10989970 3.7206461 33.13567 90-99
ACTGG 9044165 3.7185457 43.87091 60-69
CCTGT 8095280 3.6986203 61.986206 25-29
ACTCT 6578805 3.6503768 68.93549 20-24
GAGTG 9239440 3.632391 39.4263 100-109
ACTGT 6704550 3.5571535 77.32627 240-247
TCCTG 7724835 3.529369 63.749905 20-24
GTATT 5361170 3.5096438 76.331894 240-247
CTCCT 7282975 3.4799614 93.75107 20-24
GGTCC 9775255 3.4610484 143.33243 9
GGACA 8888690 3.4395127 31.628922 220-229
GGATT 6761840 3.430363 56.314682 40-44
TATCT 4858130 3.3260622 53.307816 200-209
AGACA 7025090 3.3013675 39.61052 170-179
CATCT 5929935 3.2903388 34.575146 170-179
CCATC 7261520 3.2654846 34.87911 45-49
GTCTC 7147070 3.2653964 32.915813 30-34
CTGCA 7593540 3.2651768 45.1379 25-29
GTCCC 8782470 3.2520258 75.302444 10-14
AGCTG 7804130 3.2087002 36.2212 60-69
CCTCA 7037430 3.1647122 79.7728 5
GGAGT 7976580 3.1359103 37.39033 90-99
AGGGA 8381340 3.1010938 40.524845 80-89
ATCTC 5391505 2.9915805 50.814075 170-179
AGTAG 6231860 2.975414 28.416023 50-59
AAGAA 5436425 2.9667466 39.62437 180-189
GGAAG 7999010 2.959632 30.421614 80-89
GTGAA 6176215 2.9488463 40.59412 150-159
GGCTG 8570945 2.901687 34.25259 90-99
ACCTT 5116135 2.838786 70.443954 40-44
GACAA 6027635 2.832624 26.567907 180-189
CAGGG 8879960 2.8293548 36.222363 80-89
GGGAA 7622005 2.8201404 34.11056 80-89
GAGCT 6807750 2.7990346 29.364285 60-69
TGTGC 6392295 2.7925885 57.30851 25-29
CTATG 5261820 2.7917013 27.535572 50-59
CGCCA 7668105 2.6722674 40.187386 70-79
ATCTG 5033890 2.6707711 39.79083 200-209
GTGTA 5224620 2.6505127 39.79902 230-239
CCCTC 6796290 2.6318853 27.368927 20-24
GAGTC 6397555 2.630381 28.421547 150-159
GAACA 5574955 2.619892 38.784176 210-219
AGGGC 8162535 2.6007671 33.805695 150-159
CAGTG 6271115 2.578395 72.51044 8
ATCAG 5144750 2.5689268 26.753746 45-49
ATGAA 4425165 2.5659134 30.333284 210-219
TGCAA 5131515 2.562318 38.63723 200-209
AGGCT 6218520 2.55677 20.206654 80-89
AGAAC 5437185 2.5551484 32.64234 190-199
CCAAG 6287250 2.5443547 41.00105 180-189
CTCTC 5224845 2.496543 97.85404 20-24
CACTG 5759670 2.4766233 19.488157 30-34
CTACA 4741680 2.476153 20.045652 190-199
GCAGC 7390800 2.4627795 34.557358 30-34
GTGGA 6255850 2.4594233 26.944262 100-109
CTGTC 5377495 2.4569023 47.781696 30-34
CTACT 4365465 2.4222624 22.43713 50-59
TATGC 4530285 2.4035792 20.883806 50-59
CTTCA 4329640 2.402384 50.66928 45-49
TATAT 3012515 2.395055 27.679153 240-247
GTGGT 5727450 2.3925095 31.289154 120-129
GGGCT 7065825 2.39213 42.305073 90-99
GTATC 4496175 2.3854818 25.022541 200-209
CAGGC 7072405 2.3566835 33.24121 70-79
CCGCC 7828905 2.349459 34.17386 70-79
TGGTG 5611370 2.34402 33.4467 35-39
GCCTC 6308515 2.3359547 69.53434 4
TCCAA 4465795 2.332083 45.131886 180-189
TATCA 3598205 2.318471 17.652674 170-179
GCTCC 6249750 2.3141952 34.124386 80-89
CACGG 6890810 2.2961717 50.047894 230-239
TGAAC 4582755 2.288306 41.70403 210-219
CAGTA 4528600 2.2612648 21.324099 45-49
ACAAC 4598630 2.260103 21.35441 180-189
TCTGT 3979490 2.2433953 25.776707 210-219
CCTTC 4680830 2.2366009 54.971813 45-49
ACAGC 5523680 2.2353494 29.522364 210-219
CAAAT 3680215 2.2317393 38.104374 200-209
GGGGG 8788410 2.204683 94.36285 5
GCTAT 4126950 2.1895866 33.350815 50-59
CCTCT 4580925 2.188864 48.775276 35-39
TGCAG 5317395 2.1862688 43.56262 30-34
GTGGG 6684790 2.1639733 30.326742 100-109
ACGGC 6492545 2.1634612 55.03493 230-239
GTAGT 4254355 2.1582856 25.267351 120-129
TACAT 3332360 2.147176 18.67949 190-199
CTCAC 4758655 2.1399536 55.759987 20-24
AAATG 3679150 2.13334 35.912136 200-209
AATGA 3673115 2.1298404 28.830265 210-219
GGCCG 7759330 2.1289995 26.948065 230-239
AGAGT 4424250 2.1123672 31.071373 150-159
GCAGA 5453755 2.1103513 25.385044 140-149
AACTA 3459095 2.0976486 37.56258 130-139
TGCAC 4860890 2.0901537 26.203592 25-29
GCCTG 5870385 2.0784812 33.06781 210-219
TCTAT 3025620 2.0714552 20.190691 110-119
TCCGC 5580130 2.0662441 42.06372 70-79
GGCTC 5816320 2.059339 19.643583 40-44
CAGAG 5291135 2.047425 34.343803 170-179
TTCAG 3821840 2.027708 47.24322 45-49
AGCAC 4969415 2.011047 21.23201 130-139
TGGTA 3959255 2.0085778 31.19057 120-129
ATATC 3094890 1.9941645 13.899574 160-169
GGTCT 4562900 1.9933846 34.89377 15-19
GCCAG 5973925 1.9906452 35.712795 70-79
TCTCT 3369325 1.9864563 32.506588 35-39
GGTGG 6109620 1.9777815 17.958467 40-44
ATGGA 4139025 1.9761859 12.438256 120-129
CCAGA 4846175 1.9611735 36.191975 170-179
CATAT 3042525 1.9604234 14.705128 160-169
GGATC 4765530 1.9593673 18.142689 70-79
ACCCT 4348735 1.9556137 44.20344 10-14
GCTGT 4464555 1.9504209 22.071667 230-239
AACAG 4141865 1.9464262 37.075424 210-219
ACTAT 3010305 1.9396627 17.324333 130-139
CAGAC 4788580 1.9378657 27.688934 140-149
TGGGG 5964850 1.9309171 122.82592 4
TCCAT 3470580 1.9257183 26.789484 45-49
GATGG 4860280 1.9107692 20.775036 100-109
CCTGC 5140225 1.9033535 48.606606 20-24
GTCAC 4396755 1.8905784 38.924927 160-169
AGAGA 4205060 1.8895416 29.862747 170-179
TGAGC 4591410 1.8877772 18.22202 200-209
CTGTA 3550945 1.8839825 25.541248 190-199
GCACA 4638015 1.8769343 18.780458 130-139
TGTGA 3689875 1.8719181 19.805714 210-219
TGGGA 4761325 1.8718661 16.56041 100-109
TTCCA 3368400 1.8690215 24.22577 180-189
TCAGC 4318345 1.8568625 11.5934 45-49
ACCAG 4579530 1.8532664 14.6415615 190-199
CTATT 2701990 1.849886 19.879185 110-119
ATACT 2861155 1.8435595 27.479681 130-139
TGTCT 3267545 1.8420441 48.833733 30-34
CAAGG 4756670 1.8406118 16.98959 80-89
CAGTT 3457725 1.834524 25.487528 190-199
TAGTG 3580610 1.8164867 26.478775 120-129
ACCTG 4220650 1.814854 31.163286 25-29
TAGTA 2920690 1.7994652 17.189163 120-129
CCGTG 5071285 1.7955501 21.496876 230-239
AGTCA 3593770 1.7944764 29.907465 160-169
CACAG 4416770 1.7873999 16.195833 140-149
GTGCA 4334470 1.7821352 50.60284 25-29
CCTGG 5005505 1.7722603 34.213516 2
TACAA 2914980 1.7676889 18.178186 130-139
AGCTA 3535410 1.7653354 25.695217 50-59
CATGA 3525560 1.7604171 23.278688 60-69
CTCAG 4063415 1.7472441 75.955055 6
ATGCA 3493915 1.7446158 16.75507 60-69
TTCTG 3081875 1.7373744 41.25825 30-34
GCCGA 5209460 1.7359086 21.267427 220-229
AGTTC 3227135 1.7121825 22.469208 190-199
ATTGG 3368255 1.7087564 20.652102 100-109
GCAAA 3633720 1.7076285 35.001526 200-209
GGATG 4342275 1.7071209 22.161219 100-109
AGGAC 4366410 1.6895992 23.1509 220-229
TCTCA 3022180 1.6769147 26.91833 100-109
GCTGA 4058240 1.668562 27.777557 200-209
GGAGC 5195325 1.6553472 13.560852 200-209
CGATT 3117330 1.6539246 36.686268 160-169
AACAC 3357830 1.6502831 24.4966 190-199
AGGGG 5406880 1.6472721 32.804295 90-99
GGGCC 5974750 1.6393478 27.075298 2
CAGCT 3811940 1.6391114 12.7794075 50-59
GGGGC 6203510 1.6275378 28.627922 90-99
GCACT 3779905 1.6253363 25.291708 25-29
TGACC 3753510 1.6139868 15.092602 210-219
CTGAA 3230970 1.6133194 24.031055 200-209
GAGGA 4352310 1.6103537 30.13471 220-229
ACAAT 2617875 1.5875198 25.064737 180-189
AGTTA 2570700 1.583833 15.75308 50-59
GTCCG 4455975 1.5776925 34.45858 70-79
AGTGA 3289415 1.5705379 83.96624 9
TCTGC 3418625 1.561922 36.14507 200-209
CCATG 3593265 1.5450822 15.854585 160-169
AAAAA 2327170 1.5423323 12.96866 90-99
GGCTT 3530055 1.5421678 20.545738 25-29
CGTCC 4147765 1.5358595 19.60304 180-189
TTAGT 2333045 1.5273077 25.83949 110-119
CTGGT 3488030 1.5238084 30.749538 35-39
CTTTA 2220490 1.5202324 41.917 45-49
CATCA 2904325 1.5166677 31.159319 45-49
TACGC 3527060 1.5166147 25.480034 140-149
CTCCC 3905930 1.512584 14.381127 190-199
AAGAG 3352135 1.5062802 19.370655 150-159
ACTCC 3337770 1.5009856 17.847479 140-149
GTTCT 2656400 1.4975175 23.47487 190-199
GTTAC 2782055 1.4760419 15.447392 50-59
GCCGT 4141265 1.4662654 31.722075 230-239
TCTGA 2756600 1.4625363 23.409784 220-229
TTCTC 2479415 1.4617912 22.326298 190-199
GAGCA 3776615 1.4613757 7.8383265 200-209
TAGCA 2892030 1.4440767 11.969458 130-139
CTACG 3346260 1.4388717 16.784266 130-139
CTCAA 2749770 1.4359576 19.133274 150-159
GGGGT 4425040 1.4324561 117.65032 7
GGCAG 4485925 1.4293165 13.710574 150-159
CAACT 2710665 1.4155364 18.00261 130-139
AACCC 3340725 1.4138892 20.747126 140-149
CAACC 3317655 1.4041253 15.804607 140-149
GTCCA 3241535 1.3938407 29.7943 180-189
TGGAA 2890425 1.3800393 20.010712 120-129
GGCCT 3875160 1.3720477 66.37028 3
GAACT 2739705 1.3680162 15.671112 190-199
ATCAT 2117330 1.3642824 16.306751 110-119
ATACA 2234500 1.3550354 21.674164 35-39
ATCTA 2102885 1.354975 20.965265 110-119
TGTCC 2961970 1.3532828 53.867916 15-19
CAATT 2085480 1.3437601 25.873814 180-189
GTGGC 3968570 1.3435564 14.153918 40-44
TCAAG 2675060 1.3357371 23.672022 150-159
CCTTT 2261610 1.3333797 47.69225 45-49
AGCAG 3442220 1.3319802 12.521413 50-59
CCATA 2550475 1.3318835 15.072802 160-169
TCACT 2387355 1.32467 14.090667 190-199
GTGAC 3215020 1.3218688 15.942482 210-219
AAGCT 2640180 1.3183205 17.15801 200-209
ACAGT 2638380 1.3174217 12.598832 120-129
TCCGT 2877005 1.3144634 14.30906 150-159
TTACA 2039155 1.3139112 9.844991 120-129
AATTC 2036170 1.3119876 25.777239 180-189
CACGT 3040975 1.3076009 17.407751 180-189
AGACC 3224905 1.3050702 100.6538 9
TCGGA 3169480 1.3031448 92.53656 5
ACAGA 2758105 1.2961426 20.676737 140-149
ACATA 2130065 1.2917043 21.352978 130-139
CGACA 3187370 1.2898803 16.07434 70-79
CGGCC 4466715 1.2817321 34.15667 230-239
ATCCG 2980210 1.2814724 23.716757 70-79
GATTG 2500365 1.2684654 23.829918 100-109
CCTAC 2798095 1.2582954 17.642239 190-199
CGTGT 2871620 1.2545186 25.523033 230-239
GTGCG 3693415 1.2504029 19.031805 240-247
CCAGT 2901745 1.2477329 19.580341 190-199
ACATG 2491270 1.2439653 14.694742 190-199
AACCA 2527595 1.2422448 18.36052 190-199
AGTCG 3008560 1.2369819 16.344322 150-159
CTTCT 2095280 1.2353163 22.529417 30-34
AGATC 2470575 1.2336316 13.14348 210-219
GAGAG 3329840 1.23204 29.05316 220-229
CTTCG 2681930 1.2253362 103.66871 3
ATTAT 1540840 1.2250218 9.8624 50-59
TGCGA 2978015 1.2244232 16.014769 240-247
AGAGC 3162240 1.2236409 27.806604 220-229
ACGTC 2842035 1.222058 19.181866 180-189
GATCC 2839470 1.2209551 23.559706 70-79
TGGAC 2969210 1.2208029 15.444008 80-89
TACCA 2326725 1.2150391 10.689802 45-49
ATTAG 1957265 1.2058898 25.85635 110-119
ACGCA 2971545 1.2025393 21.896385 140-149
TGAGT 2368415 1.2015256 20.514248 90-99
GATCT 2238595 1.1877048 10.441898 220-229
GTCGA 2887045 1.1870204 12.7567215 150-159
GAAGT 2478885 1.1835487 13.697044 140-149
AAGGC 3051410 1.1807549 28.205444 25-29
GGACT 2865755 1.178267 13.093562 90-99
GCAAG 3025330 1.170663 16.926003 25-29
ATTCC 2084720 1.1567471 23.829056 180-189
TTCGG 2645010 1.15552 98.96846 4
GGGTG 3566160 1.154423 14.023543 60-69
ACACA 2348045 1.1540009 7.881946 130-139
ATATT 1450510 1.1532063 29.39121 240-247
AGGTC 2792450 1.1481273 17.727076 10-14
CGCTG 3232110 1.1443678 13.077663 190-199
AGGCC 3426290 1.1417165 13.906952 2
CCGAT 2651110 1.1399612 24.838108 160-169
TGTGT 2114050 1.1395566 16.191643 240-247
TTGGG 2721895 1.1370085 15.083246 100-109
TCGAG 2763435 1.1361977 12.416196 150-159
TTATT 1340615 1.1324937 20.191792 240-247
GACCC 3240235 1.1291935 43.441948 10-14
GCTTC 2467740 1.1274759 27.1934 2
CGGCT 3182470 1.1267923 24.05032 230-239
GCCCC 3729125 1.1191125 12.218367 80-89
CTTGA 2080115 1.1036218 21.9156 90-99
GAACC 2718445 1.1001135 10.768822 180-189
ACAAG 2340950 1.1001049 17.254953 80-89
CGCAG 3289790 1.0962315 17.027073 140-149
GTAGA 2294205 1.0953728 17.448586 170-179
GCACC 3141870 1.0949141 11.355849 130-139
TTGAG 2151395 1.0914286 20.276047 90-99
ATCAA 1793185 1.0874151 12.925499 110-119
ATGGG 2764625 1.0868839 19.902544 100-109
CCCCT 2795270 1.0824775 9.6629505 140-149
TAGAC 2164550 1.0808243 17.81926 170-179
TACAG 2156110 1.0766098 9.362858 120-129
CACAT 2060035 1.0757709 14.1569805 130-139
CTCCG 2890555 1.0703322 10.176661 140-149
AGCTC 2484995 1.068533 12.977176 210-219
GGAGA 2887410 1.068341 82.98043 7
TGGCT 2434535 1.0635703 30.624203 40-44
ATGGT 2095120 1.0628797 9.462762 35-39
CAGCA 2623350 1.06163 12.384608 45-49
CTATA 1643765 1.0591452 12.990509 50-59
CGTGA 2560505 1.0527622 21.53202 150-159
ATGAG 2201790 1.051249 19.885866 60-69
GTAGC 2521495 1.036723 11.053622 50-59
GAAGC 2664400 1.0309999 13.444584 200-209
TAGTT 1574110 1.0304775 14.434977 50-59
GTATA 1665430 1.0260874 11.212774 240-247
GGGAG 3362130 1.0243142 14.733139 5
AAACT 1673400 1.0147756 17.29791 130-139
AAGGT 2125155 1.0146595 20.658693 15-19
TTTCA 1481535 1.0143157 7.4695635 100-109
TTTAG 1547945 1.0133488 29.575409 45-49
GACAG 2616500 1.0124648 15.3995905 70-79
ACTCA 1937055 1.0115496 13.18912 190-199
TTATA 1270220 1.0098695 13.706258 110-119
ATGAT 1623795 1.0004357 9.537977 120-129
ACCAA 2023720 0.9946039 17.541681 130-139
GCCAA 2454550 0.99331915 15.603961 180-189
ACACC 2330675 0.9864075 12.966564 40-44
GATAC 1969835 0.9835973 23.546225 35-39
CGAGT 2376365 0.9770522 15.408954 160-169
CCAAC 2307115 0.97643626 14.428411 130-139
AACTC 1862325 0.9725248 17.597683 190-199
GCAGT 2347140 0.9650362 6.096734 50-59
CCGTC 2599020 0.9623807 10.491233 140-149
ATGAC 1923705 0.9605632 11.017202 160-169
CATAC 1839305 0.9605035 14.479422 130-139
TATGG 1890000 0.9588198 12.152455 35-39
GGGAC 2995340 0.9543827 10.038301 90-99
GCCAT 2209820 0.95020926 7.7729225 60-69
AGCCC 2707795 0.94364285 11.482852 80-89
AATCA 1555260 0.94313365 14.35834 110-119
TCATA 1457885 0.93937504 9.065192 110-119
AACTG 1878080 0.9377813 11.732859 60-69
GCTCT 2045755 0.9346769 18.136019 210-219
CAGAA 1980835 0.9308727 18.49757 140-149
GGTAT 1833390 0.93010086 9.569736 110-119
ACAGG 2402045 0.92948055 14.975779 70-79
CGTAT 1737370 0.9217757 8.19375 240-247
CATTA 1421780 0.9161111 12.548086 110-119
CCCAG 2627185 0.915551 14.581209 80-89
GAGCC 2745970 0.9150186 20.132002 220-229
TAACA 1505225 0.9127918 8.6909895 120-129
TACAC 1746090 0.9118257 21.252066 35-39
AAGTT 1477315 0.91018796 17.70124 140-149
TGAGG 2308105 0.9074078 13.097931 220-229
CCCCA 2484430 0.90547484 16.810295 80-89
GTTAT 1367160 0.8949996 11.11976 110-119
TGGTT 1660240 0.89493513 9.003771 50-59
CGGAG 2807115 0.8944099 71.5502 6
CGAGG 2801905 0.8927498 16.242268 220-229
ACCGC 2557610 0.8913046 11.881454 220-229
AGCCG 2666895 0.8886691 21.116842 220-229
TCCTT 1501630 0.88531756 10.773335 1
ACGCT 2035425 0.8752206 16.241795 190-199
ATAGT 1410985 0.8693215 15.850111 120-129
GACTG 2111085 0.8679813 12.719611 90-99
GATGA 1809325 0.8638659 6.7721486 60-69
AGTCT 1626480 0.86294216 16.257833 8
GGTAG 2191325 0.8614969 12.022508 120-129
AGAAG 1909395 0.8579857 16.045088 140-149
GATCA 1711195 0.8544506 9.429901 110-119
TGGCA 2072640 0.85217446 5.9859815 100-109
CGGAC 2550835 0.84999526 11.466521 220-229
GTTTC 1506625 0.84934396 5.1215234 100-109
GGTTC 1942185 0.8484783 11.7950535 160-169
GTCTG 1938625 0.84692305 15.5303 3
ATCCA 1617225 0.8445311 9.976012 180-189
CCGAG 2534295 0.8444837 19.70203 220-229
CTATC 1508420 0.83697593 8.359481 110-119
TCATC 1504180 0.8346233 10.61455 110-119
TCTTC 1403800 0.82763976 44.94457 2
GAGAT 1731025 0.8264814 12.535965 210-219
GCTTG 1883960 0.8230417 16.565033 90-99
GGTGC 2424890 0.82094467 11.251161 60-69
TTACC 1478835 0.8205601 9.84702 45-49
TTATG 1237735 0.8102726 11.335704 50-59
ATATG 1313495 0.8092569 5.4740314 50-59
GCCTA 1877205 0.8071868 17.002783 190-199
GTCTA 1514615 0.8035912 9.919845 30-34
TGATG 1581385 0.8022557 12.532815 120-129
TTTAT 949155 0.80180526 10.852904 240-247
CATGG 1929100 0.7931574 9.040982 200-209
ATATA 1053725 0.788439 10.891585 130-139
ACATC 1485995 0.7760015 5.8204846 110-119
CCTCC 2000915 0.7748608 10.642834 140-149
GTTCA 1457585 0.77333355 14.402221 160-169
TATAC 1192160 0.76815754 9.058193 130-139
ACAAA 1340950 0.76531 13.075292 130-139
TATTT 901850 0.76184404 10.336737 240-247
CCAGC 2164495 0.7543075 6.256406 80-89
TTGGA 1467420 0.74443984 6.439348 60-69
ATGCC 1725545 0.74197406 8.124241 50-59
GGTTA 1462335 0.7418602 8.029579 50-59
GGGAT 1875980 0.7375223 13.047559 100-109
TCAAC 1405120 0.73376775 7.562206 110-119
TGCCA 1695765 0.72916883 7.462701 60-69
CATCC 1618250 0.7277224 6.767953 110-119
TCCGG 2046545 0.7246043 11.523316 70-79
ATAAA 1026855 0.7231102 8.31372 130-139
ATCTT 1052805 0.7207907 12.010632 1
AACGC 1777080 0.71915734 15.348434 180-189
GGATA 1486155 0.7095677 15.462721 35-39
CAACG 1727335 0.6990263 15.63685 180-189
GAAAT 1204315 0.69831705 7.4347124 110-119
GATTA 1125345 0.6933359 5.653796 50-59
ACGCC 1986025 0.6921123 13.701347 180-189
TATAG 1122535 0.6916046 6.3689456 120-129
AATAC 1138535 0.6904252 11.725975 130-139
TTTAC 1006595 0.68915355 13.38876 45-49
GGGCA 2155420 0.6867653 13.709915 150-159
AGGCA 1764950 0.6829542 6.763812 80-89
CCCCC 2173710 0.68222266 13.1511965 80-89
CGCCG 2360910 0.6774675 11.527893 220-229
CAAAC 1369755 0.67319775 13.977876 130-139
TATTG 1027490 0.67263746 6.2688446 240-247
GACCA 1661620 0.6724325 6.2888107 170-179
CACAA 1354420 0.6656609 8.625326 130-139
ATTAA 873995 0.65395784 6.692353 110-119
CAGTC 1519640 0.6534361 6.008161 210-219
AAATA 927575 0.65319735 13.119358 130-139
GCGAC 1957690 0.6523461 7.0881596 70-79
CTGAC 1512555 0.6503896 9.9459095 220-229
CCCGT 1751880 0.64869666 10.231467 140-149
GCGGA 2026395 0.645655 9.453703 220-229
ACTTC 1161475 0.6444668 31.068853 4
TTTCT 880795 0.64073956 9.559741 4
AGATG 1336190 0.6379666 6.018745 120-129
GACCG 1913635 0.637666 9.81411 210-219
TCAAT 987575 0.636335 8.556759 110-119
CACGC 1781690 0.6209033 13.212698 190-199
CCGTA 1442775 0.6203845 7.104018 230-239
AATAA 875905 0.6168113 7.7221537 130-139
TCCAC 1370770 0.61643136 10.472128 180-189
AGTAA 1057580 0.6132333 5.270916 50-59
TAGCT 1153075 0.6117733 12.259831 50-59
CCCTA 1341485 0.603262 11.895151 110-119
AAGCA 1280550 0.6017811 6.0861664 120-129
AATGG 1244910 0.5943848 6.697183 120-129
GAAGA 1314910 0.59085417 6.5384116 15-19
GGTGA 1499530 0.5895248 6.6158276 120-129
GGCCC 2044475 0.58666587 10.007108 70-79
ACCTA 1112865 0.5811492 7.1984773 130-139
TGATT 885715 0.5798257 6.0328445 50-59
CCGGC 2016795 0.578723 9.321149 70-79
TTAGC 1089525 0.5780563 9.503362 45-49
CACCG 1658125 0.57784206 8.775071 45-49
AAGAT 995195 0.5770597 5.9946694 15-19
CACGA 1421570 0.5752878 9.004004 180-189
GTCCT 1242575 0.56771517 6.2990746 45-49
GTTCC 1241040 0.56701386 6.788936 140-149
TCAGG 1363530 0.56062096 5.3406653 150-159
GACGA 1445605 0.55938244 10.068422 220-229
GCCGC 1946835 0.5586479 12.590693 220-229
CGGTT 1268315 0.55408615 11.674219 160-169
CGGCA 1657050 0.5521661 10.799695 70-79
TAATA 732720 0.54825026 8.370308 130-139
GGGGA 1786345 0.5442319 9.495062 4
CTTTG 963615 0.54322773 7.0722027 45-49
GCTAC 1251115 0.537972 7.7304935 50-59
ACCCG 1529370 0.53297204 8.907633 140-149
TTCAA 821500 0.5293261 5.6139336 200-209
TACTT 772460 0.52885574 11.511533 1
CCTAT 950500 0.52740324 5.1071534 110-119
ATTTC 756960 0.51824385 6.5931406 240-247
AAATC 846235 0.51317 8.028406 110-119
AAGTA 880980 0.51083255 5.1171565 120-129
ACATT 786775 0.50695133 6.3508773 110-119
GGAGG 1640320 0.49974355 5.323207 6
CTGCG 1407580 0.49837092 11.769756 25-29
TATGT 750705 0.49144256 6.8256016 140-149
ACGAC 1213235 0.4909778 9.408927 220-229
TGGCC 1378020 0.4879048 14.534703 2
ACCCC 1338305 0.48775837 9.070093 140-149
CCACG 1396535 0.48668024 7.8636627 180-189
GTAAC 972985 0.48584038 6.8490434 120-129
GGGTT 1161915 0.48536313 5.7459283 100-109
TATCC 854700 0.47424677 5.5195284 110-119
CAATC 899310 0.46962872 6.477701 110-119
AGTAT 761400 0.46910587 5.143664 110-119
ATGCT 872380 0.46284828 6.9531302 50-59
CCGGT 1294125 0.45820075 9.169998 160-169
TAAAT 608390 0.4552216 8.28153 130-139
GGGTA 1150800 0.4524252 5.108553 100-109
TGCTA 850235 0.45109904 6.1860127 50-59
CATAA 743655 0.45096388 6.1938605 110-119
AACAT 741805 0.449842 5.973591 110-119
GGTTT 822400 0.44330618 5.366551 100-109
TGCGC 1218075 0.43127432 8.709229 25-29
GCATG 1042915 0.4287988 8.443036 60-69
ATTCT 622835 0.42641672 7.480688 2
TTGGT 775745 0.41815725 5.108602 120-129
GGTCA 1012875 0.41644773 5.5375137 160-169
ATGGC 1005080 0.4132428 6.9637456 1
CGCGG 1505085 0.41296414 6.687597 220-229
TGACG 998145 0.41039142 8.903961 220-229
GCGCT 1152140 0.4079292 7.8856554 25-29
CACTT 725425 0.402516 7.445931 3
CATGC 931440 0.40051362 7.1347365 60-69
CTAAC 761730 0.39778304 5.40605 110-119
GCCTT 865945 0.39563814 8.800553 1
AGCTT 738800 0.39197633 6.97597 1
CCTAA 732505 0.38252148 7.528637 110-119
GGTAA 791590 0.37794626 7.1805634 120-129
ACGAG 972805 0.37643063 7.9432697 180-189
TTTGA 574030 0.3757838 6.0452967 45-49
CCGCG 1308315 0.37542343 6.979462 220-229
TACCT 666645 0.36990085 5.032124 2
CCGGG 1300775 0.35690573 5.0596 80-89
GAGGC 1071390 0.3413689 5.7240977 35-39
TTCTT 463085 0.33687392 19.29616 1
TGGGC 964280 0.32645628 8.9190855 1
TGCTG 729065 0.3185051 13.487452 1
CGAGC 943050 0.3142453 6.700368 180-189
TCGGT 682560 0.29818857 5.505818 7
GCTTT 526710 0.29692718 5.1079254 45-49
ATGTG 582600 0.29556 5.139977 140-149
AACCT 559510 0.29218173 5.043067 2
AACTT 452720 0.29170603 11.163126 3
CGCTT 637440 0.2912374 5.6836905 1
GACTT 545550 0.28944597 6.7112064 1
CTCTT 473495 0.27915895 8.806721 1
TCACA 520555 0.27183905 5.2796206 5
GAGGT 661970 0.26024666 6.7512555 7
TTGGC 593100 0.25910637 7.348024 1
GCGAG 791495 0.2521881 5.8496237 240-247
CCCTT 523065 0.24993165 5.5656347 3
TAACT 377045 0.24294555 7.6132627 2
TTCCT 410950 0.2422842 6.050558 4
AATCT 362380 0.23349626 7.079608 2
TGTAA 376855 0.23218401 8.104997 25-29
GTCTT 406310 0.22905296 11.096661 1
ATTGT 346330 0.22672194 5.245435 240-247
CGGGG 845370 0.22178923 9.159638 3
CCTCG 585545 0.21681914 5.334516 5
TGCTT 381520 0.21507786 11.3215885 1
TCGCA 437190 0.18798909 7.4137793 7
TGCCT 396060 0.18095428 5.0714626 4
TAGGC 372045 0.15296784 6.6871815 1
TTGCT 191380 0.10788845 5.483039 4