FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_9_SL248355.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_9_SL248355.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 12235244
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 52708 0.43078830303670285 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 45651 0.37311066293406164 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 43241 0.3534134668667008 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 42983 0.35130480438314104 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 39977 0.3267364345165491 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 39047 0.31913544184325215 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37844 0.30930319003037454 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 36753 0.3003863265824531 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 34458 0.2816290382112527 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33872 0.2768395955160355 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33306 0.27221361502884617 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33019 0.2698679323436459 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 32936 0.2691895641803302 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31914 0.260836645350105 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31609 0.2583438466776796 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31074 0.2539712326129336 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 30709 0.2509880473164246 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 30037 0.24549571712668747 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 30004 0.24522600448344142 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 29610 0.24200579898529198 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29480 0.24094329463311073 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29262 0.23916155656560667 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28802 0.23540192578096522 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28229 0.23071873352096617 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27601 0.22558602018889037 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27371 0.22370620479656966 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27224 0.22250475756756463 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25827 0.2110869223368165 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25461 0.2080955639299061 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25250 0.20637103763521186 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25149 0.20554555348467102 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24449 0.19982437620369486 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23902 0.19535368481413204 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23585 0.19276280881688998 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23547 0.19245223062163697 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 23496 0.19203540199116584 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 23141 0.1891339477986708 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22254 0.18188439887263386 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22232 0.18170459044380316 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 22187 0.1813368004757404 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22132 0.1808872794036637 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21721 0.17752813102869056 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21618 0.17668630065734692 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 21000 0.17163531842928512 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 20731 0.16943675173130998 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 20649 0.16876655667839563 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20501 0.16755693633898924 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 20493 0.1674915514557781 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19928 0.16287374407899016 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 19625 0.16039729162736763 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 19407 0.15861555355986362 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19265 0.1574549718828656 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 19006 0.15533813628890442 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18760 0.15332755113016136 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18053 0.14754916207637542 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17842 0.14582463578168117 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17735 0.14495011296873198 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 17458 0.14268616138754567 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 17284 0.14126404017770305 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17163 0.14027509381913428 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16078 0.13140726903362124 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15355 0.125498110213413 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15011 0.12268656023533328 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15007 0.1226538677937277 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14733 0.1204144355437456 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 13690 0.1118898813950911 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12821 0.10478744845627926 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12594 0.10293215239516271 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 24820855 8.15342 67.21047 35-39
TGGAT 18795030 7.639939 80.10967 35-39
TATTA 10696925 6.839886 143.20349 240-247
TCACC 18936685 6.790486 77.665565 160-169
TCTCC 16703395 6.364728 87.36003 20-24
AGTGG 19175120 6.028708 40.50574 100-109
TCCCT 15758580 6.0047116 72.42013 15-19
CTGTG 16404070 5.7260213 87.073906 25-29
CTGAG 16713160 5.490118 50.578655 15-19
TGGGT 15491755 5.1756516 45.75756 100-109
TGTAT 9756015 5.127197 66.930466 240-247
TTACT 9078665 4.985014 125.719215 240-247
TTCAC 11170185 4.9565673 75.568436 40-44
CTCCA 13497775 4.8401527 41.922558 80-89
CTCTG 13219485 4.821173 73.2654 35-39
CCTGA 14037990 4.817979 52.287033 15-19
ATTAC 8989700 4.6452746 119.237236 240-247
ATTCA 8970575 4.635392 113.92088 40-44
AAGGG 15404925 4.5579286 39.85694 90-99
TCTGG 13042170 4.5525126 134.5724 35-39
TGAGA 11623925 4.4465322 95.646576 15-19
GAAGG 14848995 4.3934426 32.065502 150-159
CCAGG 16376095 4.347201 53.551395 80-89
ACACG 13410355 4.331338 55.61484 230-239
TGGAG 13716485 4.3125 39.186337 90-99
GACAC 13328155 4.304788 52.604427 230-239
CCCTG 14600410 4.3030806 85.131134 10-14
ACCAT 10217630 4.266705 70.44594 160-169
TCAGT 9988320 4.242054 98.405266 7
GAGAC 13718725 4.240906 87.263176 8
TCCAG 12221845 4.1946597 41.231937 80-89
CAGCC 15047895 4.1736107 56.2128 30-34
AGCCT 12114720 4.1578927 51.936325 30-34
ACTAC 9938765 4.1502557 36.453728 130-139
GGGTC 15358230 4.1465015 125.34163 8
TACTG 9760335 4.1452284 90.2273 240-247
CACCA 12268140 4.139972 60.01873 160-169
TACTA 7866575 4.064919 29.474659 130-139
CACCT 11226805 4.025808 44.65765 40-44
CTGGG 14716960 3.9733677 132.79408 3
GACTC 11553480 3.96527 52.569748 20-24
GATTC 9290255 3.9455845 59.413734 40-44
AGACT 9851140 3.9372408 70.335045 15-19
TGAAG 10080360 3.856068 41.159515 150-159
ACTGG 11392905 3.7424636 44.64425 60-69
CAAGA 9925960 3.7333596 46.51907 180-189
GCTGG 13780355 3.7204976 33.268387 2
CCTGT 10039430 3.6614006 62.062744 25-29
ACTCT 8220570 3.647729 69.280655 20-24
GAGTG 11457445 3.6022515 39.70819 90-99
ACTGT 8429550 3.5800421 78.023094 240-247
TCCTG 9752200 3.5566473 64.67743 20-24
GTATT 6755305 3.5501974 76.543304 240-247
CTCCT 9172320 3.495057 94.72585 20-24
GGACA 11239490 3.4744935 31.482763 220-229
GGATT 8447605 3.4338431 56.683006 40-44
GGTCC 12168145 3.432432 142.0997 9
TATCT 6064340 3.3298752 52.90231 200-209
AGACA 8781955 3.303075 39.587086 170-179
CATCT 7421085 3.292972 34.470955 170-179
GTCTC 9015765 3.2880683 32.762825 30-34
CTGCA 9555205 3.2794425 45.170074 25-29
CCATC 9078850 3.255575 34.762928 45-49
AGCTG 9888005 3.2481177 36.984066 60-69
GTCCC 10944055 3.225468 75.2368 10-14
CCTCA 8840895 3.170247 83.51606 5
GGAGT 9991315 3.141296 37.64288 90-99
AGGGA 10345255 3.0609 40.84161 80-89
AGTAG 7846910 3.0017 28.792816 50-59
AAGAA 6774605 2.9672685 39.484344 180-189
GTGAA 7712640 2.9503376 40.300396 10-14
GGAAG 9883830 2.924376 30.60114 80-89
ATCTC 6564520 2.9128869 50.409657 170-179
GGCTG 10756150 2.9040058 34.342415 90-99
ACCTT 6475975 2.873597 72.80767 40-44
CAGGG 11287900 2.8679767 36.405415 80-89
GACAA 7622675 2.8670459 26.431904 180-189
CTATG 6671235 2.8332832 27.95524 50-59
GAGCT 8605225 2.8267365 29.741932 60-69
TGTGC 8014510 2.7975528 57.452847 25-29
GGGAA 9369845 2.772301 34.25448 80-89
ATCTG 6323420 2.6855657 39.41876 200-209
CGCCA 9630410 2.6710439 40.407356 70-79
GAGTC 8067515 2.6501038 28.59617 150-159
AGGGC 10360565 2.6323638 33.990284 150-159
CAGTG 7982525 2.6221855 76.10659 8
ATCAG 6531815 2.6105945 26.91916 45-49
GAACA 6931365 2.60703 38.51546 210-219
AGGCT 7889720 2.5916996 20.843714 25-29
CCCTC 8413275 2.5906956 26.871828 20-24
TGCAA 6466255 2.584392 38.277557 200-209
ATGAA 5533905 2.575626 30.252642 210-219
AGAAC 6792345 2.5547419 32.499203 190-199
CCAAG 7826620 2.5278776 40.60958 180-189
CTACA 6048335 2.5256796 20.897219 190-199
GTGTA 6202665 2.521304 40.6624 230-239
GTGGA 7962555 2.5034485 26.998213 100-109
CACTG 7235345 2.4832432 19.707539 60-69
CTCTC 6473645 2.4667435 97.98911 20-24
GCAGC 9238885 2.452556 34.565083 30-34
TATGC 5761540 2.4469345 21.384796 50-59
CTACT 5510385 2.4451334 22.97795 50-59
CTGTC 6686405 2.4385457 48.141132 30-34
CTTCA 5489560 2.4358928 51.293186 45-49
GGGCT 8928105 2.41046 42.603893 90-99
TATAT 3738600 2.390556 27.248188 240-247
CAGGC 8942630 2.373912 33.969856 70-79
GCCTC 7989100 2.3545737 72.865166 4
GTGGT 7007475 2.3411324 31.314459 120-129
TGGTG 6977300 2.331051 33.749825 35-39
CCGCC 9777940 2.3288314 34.234665 70-79
TCCAA 5547705 2.3166254 44.617783 180-189
GTATC 5447780 2.3136802 24.683083 200-209
GCTCC 7823165 2.3056688 34.12845 80-89
CACGG 8628245 2.2904553 49.48651 230-239
TGAAC 5686760 2.2728481 41.440125 210-219
CAGTA 5679310 2.2698708 21.53568 45-49
ACAAC 5768215 2.2667606 21.43833 180-189
TATCA 4386595 2.2666984 17.64941 170-179
ACAGC 7004435 2.2623243 29.184952 210-219
CCTTC 5917540 2.254843 55.529236 45-49
TCTGT 4978810 2.2469196 25.765928 210-219
CAAAT 4599085 2.2364511 37.968452 200-209
GCTAT 5229085 2.2208002 34.2367 50-59
TACAT 4268505 2.2056773 19.640064 190-199
GGGGG 10953360 2.1892254 94.222336 5
TGCAG 6637535 2.1803687 43.756546 30-34
CCTCT 5713065 2.176929 49.135017 35-39
GTAGT 5338530 2.170044 25.277348 120-129
GTGGG 8384855 2.1667027 30.14596 100-109
ACGGC 8127615 2.157558 54.452885 230-239
AACTA 4394685 2.137055 38.331966 130-139
AAATG 4576800 2.130164 35.830166 200-209
AATGA 4562085 2.123315 28.66774 210-219
TGCAC 6176040 2.119679 26.220226 25-29
GGCCG 9704060 2.1172414 26.952414 230-239
GCAGA 6831835 2.1119435 25.07125 140-149
CTCAC 5842730 2.0951383 55.012875 20-24
GCCTG 7376955 2.0809164 33.26513 210-219
TCTAT 3768100 2.0690303 19.954752 110-119
AGAGT 5388800 2.0613923 31.58586 150-159
CAGAG 6658935 2.0584943 33.977715 170-179
TTCAG 4844730 2.057564 47.735527 45-49
TCCGC 6978490 2.0567234 42.248417 70-79
TGGTA 5036605 2.0473154 31.68376 120-129
GGCTC 7250250 2.0451753 19.655071 40-44
AGCAC 6329330 2.0442758 21.136066 130-139
ATGGA 5313945 2.0327582 12.7649355 100-109
GGTCT 5803295 2.025704 36.40647 15-19
ATATC 3892220 2.0112386 14.048397 160-169
GCCAG 7485100 1.9869958 35.90727 70-79
GGATC 6039235 1.9838327 18.178703 70-79
TCTCT 4197675 1.9792819 32.364365 35-39
CATAT 3815245 1.971463 14.852031 160-169
ACTAT 3813265 1.9704398 17.906586 130-139
GATGG 6235310 1.9603978 21.65545 100-109
AACAG 5185660 1.9504343 36.829605 210-219
GCACA 6031965 1.9482316 19.201351 130-139
CCAGA 6021070 1.9447128 35.73301 170-179
GCTGT 5564535 1.9423622 21.96264 230-239
TGGGG 7488730 1.935138 123.151695 4
GGTGG 7483840 1.9338744 17.96293 40-44
TCCAT 4357885 1.9337325 26.601929 45-49
ACCCT 5391150 1.9332068 43.52233 10-14
CAGAC 5958805 1.924602 27.315268 140-149
GTCAC 5597130 1.9209913 39.485554 160-169
CCTGC 6516745 1.9206364 50.0811 20-24
TGAGC 5803295 1.9063286 18.570187 200-209
TGGGA 6014350 1.8909277 17.201742 100-109
TCAGC 5505115 1.8894106 11.638706 45-49
CAAGG 6102430 1.8864604 17.772404 80-89
ACCAG 5827370 1.8821508 14.493072 190-199
TTCCA 4236980 1.8800831 23.835402 180-189
AGAGA 5216285 1.8778102 29.645199 170-179
CTGTA 4413110 1.8742542 25.438381 190-199
TGTGA 4606050 1.8723003 19.77306 210-219
ATACT 3587785 1.8539269 27.429638 130-139
CACAG 5738630 1.8534892 16.817776 140-149
CTATT 3368340 1.8495256 19.654625 110-119
CAGTT 4332770 1.8401339 25.359377 190-199
TGTCT 4052350 1.8288114 49.094505 30-34
AGTCA 4561870 1.8232592 30.095928 160-169
TAGTG 4483455 1.822467 26.53889 120-129
TAGTA 3680200 1.8201228 17.258837 120-129
CCGTG 6363175 1.794946 21.853256 230-239
CATGA 4482410 1.7915013 23.446825 60-69
ACCTG 5218540 1.7910554 30.655287 25-29
TACAA 3679485 1.7892665 18.209991 130-139
AGCTA 4473465 1.7879261 26.118681 50-59
ATGCA 4463305 1.7838655 16.928661 60-69
CCTGG 6320240 1.7828348 34.212826 2
TTCTG 3933590 1.7752154 43.508102 30-34
CTCAG 5169535 1.7742362 79.65278 6
GTGCA 5397215 1.7729352 50.79267 25-29
GGATG 5622250 1.7676505 23.111368 100-109
GCCGA 6524115 1.7318926 20.957886 220-229
AGTTC 4073700 1.7301062 22.477463 190-199
ATTGG 4225250 1.71751 20.67759 100-109
GCAAA 4539435 1.7073756 34.71858 200-209
GCTGA 5141525 1.6889433 28.217976 200-209
AGGAC 5449185 1.6845211 23.113014 220-229
GGAGC 6596070 1.6758986 13.979705 200-209
CGATT 3931840 1.6698583 36.83124 160-169
CAGCT 4849055 1.6642443 12.995166 50-59
TCTCA 3747870 1.6630495 26.826866 100-109
AACAC 4207055 1.6532646 23.99787 190-199
AGGGG 6758075 1.64342 32.864883 90-99
GGGCC 7465810 1.6288978 28.398796 2
TGACC 4743875 1.6281455 15.014153 210-219
GGGGC 7788030 1.626326 28.590418 90-99
GCACT 4731560 1.6239188 25.221834 25-29
CTGAA 4035550 1.6129031 23.995644 200-209
GAGGA 5446130 1.6113726 30.104445 220-229
GGCTT 4601020 1.6060367 21.867912 25-29
AGTGA 4189545 1.6026381 88.36758 9
AGTTA 3240160 1.6024914 16.06076 50-59
ACAAT 3249355 1.5801021 24.506662 180-189
GTCCG 5564090 1.5695376 34.5346 70-79
CCATG 4538340 1.5576038 16.239067 160-169
CGTCC 5244075 1.5455511 19.537128 180-189
TCTGC 4236250 1.544969 35.74996 200-209
CTTTA 2804090 1.5397007 42.35579 45-49
TTAGT 2924510 1.5369532 25.907276 110-119
CATCA 3649290 1.5238801 31.360771 45-49
GTTAC 3550820 1.5080384 15.77112 50-59
CTCCC 4868590 1.4991825 14.308284 190-199
CTGGT 4291030 1.4978312 30.972176 35-39
TACGC 4363350 1.4975455 25.14558 140-149
GTTCT 3314205 1.4956892 23.461906 190-199
TCTGA 3507560 1.4896657 24.09038 220-229
GAGCA 4811640 1.4874351 8.176304 200-209
ACTCC 4125525 1.4793676 17.453209 140-149
TAGCA 3637845 1.4539509 11.995694 130-139
TTCTC 3077535 1.4511149 22.217283 190-199
GGCAG 5671730 1.4410464 14.204634 150-159
CTCAA 3441270 1.4370146 19.07564 150-159
CAACT 3419915 1.4280971 18.035522 130-139
GGGGT 5522140 1.4269581 117.70978 7
CTACG 4132490 1.418312 16.74627 130-139
GCCGT 5022915 1.416881 31.840816 230-239
AACCC 4168590 1.4067205 20.605923 140-149
CAACC 4163940 1.4051514 15.622199 140-149
GTCCA 4086565 1.4025502 29.882334 180-189
GGCCT 4944785 1.3948419 69.62856 3
ATACA 2852095 1.3869218 22.800013 35-39
AAGAG 3852000 1.3866814 19.371851 150-159
TGGAA 3620550 1.3849791 20.000013 120-129
GAACT 3446860 1.377619 15.7840185 190-199
ATCTA 2629010 1.3584962 20.834448 110-119
TTACA 2615985 1.3517658 9.915736 120-129
GTGGC 4994985 1.3485742 13.968589 40-44
CCTTT 2859615 1.3483617 48.199158 45-49
AGCAG 4346700 1.3437068 12.468631 50-59
ACAGA 3558025 1.3382471 21.364872 140-149
CGACA 4138615 1.3367088 16.874594 70-79
TCAAG 3343610 1.3363528 23.641247 150-159
AAGCT 3340480 1.3351017 17.227373 200-209
CCATA 3196330 1.3347318 15.21036 160-169
TGTCC 3658265 1.3341769 53.388496 15-19
ACAGT 3332515 1.3319185 12.633947 120-129
CAATT 2555130 1.32032 25.339268 180-189
GTGAC 4009980 1.3172413 15.843218 210-219
ACATA 2706105 1.3159295 21.718386 130-139
CACGT 3829400 1.3142886 17.251667 180-189
TCACT 2940035 1.3045872 14.227319 190-199
TCCGT 3570395 1.3021303 14.016336 150-159
AATTC 2510040 1.2970203 25.320078 180-189
ACATG 3239610 1.2947868 15.370658 190-199
ATCAT 2501970 1.2928504 16.423536 110-119
GTGCG 4768210 1.2873482 19.351736 240-247
AGACC 3963930 1.2802881 100.68376 9
CGGCC 5613630 1.2796688 33.940796 230-239
ATCCG 3724545 1.2783011 23.80115 70-79
GATTG 3135430 1.274512 23.869528 100-109
CTTCT 2695450 1.2709548 23.780327 30-34
TGCGA 3850695 1.2649176 16.31926 240-247
CCTAC 3525880 1.2643416 18.295656 190-199
CCAGT 3649355 1.2524952 19.479193 190-199
TGGAC 3811510 1.2520458 16.317663 80-89
AACCA 3171030 1.2461334 18.27993 190-199
TGAGT 3058670 1.2433101 21.615784 90-99
TACCA 2970160 1.2402872 11.169883 45-49
TCGGA 3755595 1.2336781 93.032585 5
AGTCG 3750660 1.2320569 16.275269 150-159
ACGTC 3566585 1.2240878 19.084835 180-189
ATTAT 1912275 1.2227573 10.0127125 50-59
GAGAG 4122365 1.2197039 28.771149 220-229
GATCC 3536555 1.2137811 23.643211 70-79
AAGGC 3922130 1.2124584 29.691042 25-29
GAAGT 3159020 1.2084285 14.250319 140-149
CTTCG 3312050 1.2079114 104.10822 3
CGTGT 3452575 1.2051593 26.05585 230-239
ACGCA 3726450 1.2035859 21.664848 140-149
ATTAG 2431750 1.2026747 25.83882 110-119
ACACA 3050435 1.1987427 8.134047 130-139
GCAAG 3860870 1.193521 17.566685 25-29
GTCGA 3605400 1.1843405 12.695295 150-159
GGGTG 4555110 1.177071 14.694044 60-69
AGGTC 3573150 1.1737467 18.436886 10-14
GGACT 3563860 1.1706948 13.009937 90-99
AGGCC 4403455 1.1689419 13.971509 2
AGAGC 3779700 1.1684285 27.506401 220-229
GCTTC 3156770 1.1512806 27.835854 2
ATTCC 2579715 1.1447018 23.364256 180-189
ATATT 1789820 1.1444565 29.021204 240-247
CCGAT 3333745 1.1441747 24.745201 160-169
ACAAG 3034850 1.1414701 18.241974 80-89
TTGGG 3415005 1.1409215 15.132656 100-109
CTTGA 2685755 1.140644 23.01047 90-99
TTCGG 3266155 1.1400872 99.5069 4
TCGAG 3455755 1.1351835 12.369321 150-159
GATCT 2665195 1.1319121 10.67045 220-229
GCCCC 4748545 1.1309704 12.238748 80-89
TTGAG 2778080 1.1292539 21.3137 90-99
CGGCT 4000615 1.1285071 23.855904 230-239
TGTGT 2611830 1.1281581 16.269348 240-247
TTATT 1658955 1.1272047 19.931402 240-247
CGCTG 3964010 1.1181813 12.807719 190-199
ATCAA 2299295 1.1181052 13.209223 110-119
ATGGG 3543755 1.1141661 20.532848 100-109
AGATC 2767615 1.1061428 13.720102 210-219
GACCC 3982665 1.1046125 42.683647 10-14
GCACC 3978305 1.1034033 11.277787 130-139
CACAT 2638900 1.1019589 14.295271 130-139
CCCCT 3570750 1.0995393 9.873762 70-79
TACAG 2741745 1.0958033 9.370232 120-129
ATGGT 2689480 1.0932392 9.782258 35-39
GAACC 3377790 1.090974 10.814185 180-189
TAGAC 2712065 1.083941 17.776407 170-179
AGCTC 3143190 1.0787743 12.883951 210-219
CGCAG 4063750 1.0787637 16.866432 140-149
CAGCA 3331870 1.0761425 12.786378 45-49
CTATA 2063555 1.066307 13.512925 50-59
ATGAG 2768500 1.059042 20.190031 60-69
TGGCT 3031400 1.0581435 30.62762 40-44
CTCCG 3590260 1.0581331 9.997565 140-149
AAGGT 2750600 1.0521945 21.500038 15-19
GGAGA 3553850 1.0514946 83.45134 7
GTAGC 3191115 1.0482517 11.291776 50-59
TAGTT 1992830 1.0473161 14.7414875 50-59
GAAGC 3386180 1.0467787 13.508651 200-209
AAACT 2149975 1.0454936 17.953241 130-139
GACAG 3371305 1.0421804 16.19543 70-79
CGTGA 3156775 1.0369713 21.026182 150-159
GTATA 2070590 1.0240552 11.135802 240-247
GTAGA 2672770 1.0224222 17.43893 170-179
GGGAG 4198325 1.0209433 14.578739 5
ACACC 3021675 1.0196859 13.497851 40-44
TTTCA 1855285 1.0187204 7.400919 100-109
AAAAA 1892125 1.0083357 6.407968 90-99
GATAC 2521305 1.0076991 24.55237 35-39
ACTCA 2407680 1.0054053 13.243315 190-199
TTTAG 1911330 1.0044844 29.82187 45-49
TTATA 1568930 1.0032138 13.562404 110-119
ATGAT 2022250 1.0001477 9.250367 120-129
GCCAA 3096455 1.0001072 15.650163 180-189
ACCAA 2517560 0.98933655 17.560116 130-139
ATGAC 2462465 0.9841824 11.507076 160-169
AACTC 2340750 0.97745645 17.718552 190-199
CGAGT 2973050 0.97661936 15.288084 160-169
CCAAC 2888750 0.9748294 14.423425 130-139
CAGAA 2572265 0.96748227 19.21381 140-149
ACAGG 3128515 0.96712613 15.781352 70-79
CCGTC 3277570 0.9659761 10.583759 140-149
TATGG 2374895 0.9653644 12.56503 35-39
CATAC 2306340 0.9630875 14.505895 130-139
GCAGT 2917170 0.9582633 6.104458 50-59
GGGAC 3768045 0.9573672 9.973995 90-99
AATCA 1962300 0.9542306 14.688587 110-119
AACTG 2379505 0.9510254 12.162428 60-69
GGTAT 2325620 0.94533473 9.4923725 110-119
AAGTT 1910850 0.9450523 18.435848 140-149
GCCAT 2751790 0.9444419 7.7640576 60-69
TAACA 1941725 0.94422543 9.076001 120-129
TACAC 2261065 0.94418144 22.691877 35-39
AGCCC 3385545 0.93899816 11.41163 80-89
TCATA 1816415 0.93860155 9.007167 110-119
GCTCT 2563890 0.93505603 18.04762 210-219
TGGTT 2142285 0.9253421 9.234547 50-59
TGAGG 2916170 0.9168517 13.23034 220-229
GAGCC 3451480 0.9162304 19.901524 220-229
CCCAG 3285025 0.9111185 14.728276 80-89
TCCTT 1907600 0.8994689 10.779586 45-49
CCCCA 3101195 0.8986741 16.908436 80-89
GTTAT 1704295 0.8956788 10.998247 110-119
AGAAG 2480100 0.8928112 16.777693 140-149
GATCA 2228750 0.89077264 9.761436 110-119
ACCGC 3204515 0.88878876 11.734479 220-229
AGCCG 3331125 0.88428086 20.869986 220-229
CGAGG 3474980 0.8829066 16.004896 220-229
CGGAG 3454585 0.8777246 71.78732 6
ATAGT 1769460 0.8751249 15.969575 120-129
GATGA 2287360 0.8749901 6.897729 60-69
GGTAG 2747840 0.86392826 12.039329 120-129
GACTG 2622970 0.86162126 12.655789 90-99
ATCCA 2062645 0.8613247 10.365469 180-189
GTTTC 1905510 0.85995 5.041726 100-109
GCTTG 2451930 0.85587317 17.388329 90-99
CTATC 1923635 0.8535782 8.50344 110-119
TGGCA 2594700 0.8523349 5.817017 100-109
TCATC 1919610 0.85179216 10.913067 110-119
AGTCT 2005515 0.85174507 15.896737 8
TTACC 1908720 0.84695995 10.200309 45-49
GGTGC 3135640 0.8465777 11.824569 60-69
ACGCT 2465730 0.84626323 15.92946 190-199
CGGAC 3187880 0.8462551 11.350778 220-229
GGTTC 2415120 0.8430242 11.490626 160-169
GAGAT 2201460 0.8421306 13.085826 210-219
CGTAT 1972015 0.8375177 8.099855 240-247
CCGAG 3152235 0.83679277 19.45909 220-229
GCCTA 2433000 0.83502996 17.639189 190-199
TTATG 1574495 0.82746345 11.661087 50-59
CATTA 1597950 0.82571346 12.568912 110-119
TCTTC 1745495 0.82303333 44.948677 2
CATGG 2502045 0.8218986 9.356009 200-209
GTCTG 2343390 0.8179861 14.341135 3
ATATG 1636555 0.8093938 5.7697177 50-59
TTTAT 1188535 0.8075699 10.658073 240-247
GTCTA 1892135 0.8035925 10.195925 30-34
TGATG 1967770 0.7998733 12.252101 120-129
ACAAA 1727950 0.7907532 13.510787 130-139
ACATC 1891440 0.7898325 5.7570357 110-119
ATATA 1298960 0.7816413 10.930318 130-139
GTTCA 1812310 0.7696907 14.05114 160-169
GGGAT 2442810 0.76802593 13.691318 100-109
CCAGC 2766460 0.76729184 6.289084 80-89
CCTCC 2488380 0.7662456 10.433605 140-149
GGTTA 1883835 0.76575476 8.222429 50-59
TATAC 1481490 0.76553476 9.083609 130-139
TATTT 1120785 0.76153606 10.139985 240-247
TCAAC 1814955 0.7578937 7.8669896 110-119
TTGGA 1838330 0.7472576 6.463897 60-69
ATGCC 2160420 0.7414778 8.1235695 50-59
CATCC 2063330 0.7398873 6.9239283 110-119
GGATA 1912780 0.7317011 16.077868 35-39
AACGC 2254455 0.7281542 15.438732 180-189
TGCCA 2108810 0.72376484 7.4410696 60-69
ATCTT 1313565 0.72126687 11.94412 3
TCCGG 2548840 0.71898544 11.4139805 70-79
ATAAA 1267460 0.717741 8.124903 130-139
GGGCA 2805245 0.71274346 14.203433 150-159
CAACG 2202365 0.71132994 15.737076 180-189
GATTA 1427685 0.7060926 5.877403 50-59
TTTAC 1283345 0.70467335 13.779521 45-49
GAAAT 1512165 0.7038016 7.602057 110-119
CAAAC 1786630 0.7020998 14.516483 130-139
TATAG 1414610 0.6996261 6.4259553 120-129
AATAC 1429255 0.69502056 11.700876 130-139
ACGCC 2505595 0.6949396 13.733407 180-189
GACCA 2134555 0.68942827 6.550799 170-179
AGGCA 2215910 0.68501014 6.6746154 80-89
CACAA 1742160 0.68462425 8.698509 130-139
GCGAC 2550960 0.6771782 7.4026685 70-79
CCCCC 2713450 0.6752264 13.130555 80-89
TATTG 1277545 0.6714037 6.1650863 240-247
CTGAC 1924905 0.66064674 10.293556 220-229
CAGTC 1901455 0.6525985 5.954159 210-219
CCCGT 2208750 0.65097 10.329683 140-149
AAATA 1144285 0.6479891 13.019406 130-139
TCAAT 1240750 0.64113647 8.781288 110-119
AGATG 1671140 0.6392658 6.0099483 120-129
GCGGA 2510545 0.6378675 9.34063 220-229
ACTTC 1429390 0.6342659 29.87692 4
GACCG 2382365 0.6324229 9.732403 210-219
TCCAC 1753900 0.62892914 10.895389 180-189
CGCCG 2745120 0.62577057 11.400372 220-229
TTTCT 1069940 0.62428373 9.22935 4
CCCTA 1726930 0.619258 12.321868 110-119
AAGCA 1632340 0.61395687 6.175422 120-129
TAGCT 1444730 0.6135789 12.451695 50-59
AATAA 1079320 0.6112005 7.4960647 130-139
CACGC 2200700 0.61037546 12.894004 190-199
AGTAA 1301315 0.6056664 5.307601 50-59
AATGG 1578345 0.60376865 6.9427285 120-129
CACGA 1846525 0.5963991 9.291819 180-189
GGCCC 2610755 0.59514105 10.442768 70-79
CACCG 2123705 0.5890205 9.200081 45-49
GTTCC 1602270 0.5843512 7.0675454 140-149
TGATT 1111115 0.58393776 6.27395 50-59
GGTGA 1840885 0.57877916 6.5933294 120-129
CCGGC 2531665 0.5771119 9.189862 70-79
ACCTA 1375815 0.5745165 7.113774 130-139
GACGA 1856230 0.5738213 10.430121 220-229
TTAGC 1345340 0.57136786 9.372252 45-49
TCAGG 1733870 0.5695602 5.5397615 150-159
GTCCT 1538450 0.5610759 6.50736 45-49
AAGAT 1201610 0.5592611 6.076311 15-19
GGGGA 2282350 0.5550189 9.222719 4
CCGTA 1615565 0.5544781 6.9927635 230-239
ATTAA 918790 0.5528763 6.6234903 110-119
GCCGC 2423615 0.55248106 12.421979 220-229
GCTAC 1605750 0.55110955 8.031779 50-59
CTTTG 1220205 0.55067426 7.41453 45-49
CGGCA 2046855 0.54335845 10.695261 70-79
CGGTT 1555590 0.5429958 11.384672 160-169
TAATA 900875 0.5420961 8.154096 130-139
CCTAT 1211410 0.5375413 5.2919927 110-119
GAAGA 1481840 0.5334475 6.662193 15-19
ACCCG 1921070 0.5328187 8.89059 140-149
TACTT 966575 0.53073776 11.271928 1
AAATC 1086855 0.5285177 8.233693 110-119
TTCAA 1020785 0.5274733 5.654284 200-209
ATTTC 925420 0.5081399 6.5195117 240-247
GGAGG 2083810 0.50673825 5.4215918 6
ACGAC 1561525 0.50434846 9.812499 220-229
CCACG 1814585 0.50328445 8.112299 180-189
ACATT 971295 0.50190014 6.2268496 110-119
GTAAC 1250210 0.49967602 7.179613 120-129
AGTTT 946260 0.4972994 5.0082803 140-149
CTGCG 1759385 0.49629337 11.949311 25-29
TGGCC 1757565 0.49577993 15.739907 2
TATGT 934425 0.4910797 6.9331064 140-149
GGGTT 1462175 0.48849908 5.6700516 100-109
TATCC 1084620 0.48128048 5.6330457 110-119
ACCCC 1648740 0.47777706 8.930068 140-149
CAATC 1123505 0.46915618 6.632701 110-119
ATGCT 1104140 0.46892986 7.1691294 50-59
AGTAT 942015 0.46589395 5.06464 110-119
TGCTA 1078600 0.458083 6.385153 50-59
GGGTA 1452420 0.45664474 5.1248226 100-109
CATAA 938925 0.4565821 6.178637 110-119
AACAT 929785 0.45213744 6.031896 110-119
CCATT 1016600 0.45109782 5.0954394 110-119
TAAAT 745420 0.44855198 8.100832 130-139
CCGGT 1589720 0.4484336 8.910087 160-169
GGTTT 1036110 0.44753903 5.3159676 100-109
TGCGC 1552860 0.43803605 8.941392 25-29
TTGGT 988825 0.42711467 5.2909765 120-129
ATTCT 775170 0.42563894 7.603593 2
GGTCA 1295140 0.42544147 5.6555943 160-169
GCATG 1288490 0.42325702 8.40936 60-69
TGACG 1286855 0.42271993 9.318447 220-229
GCGCT 1482205 0.41810545 8.117164 25-29
CGCGG 1874825 0.40905112 6.6232347 220-229
ATGGC 1243230 0.40838954 7.290735 1
CTAAC 969770 0.4049591 5.6928153 110-119
GCCTT 1102530 0.40209493 8.864305 1
CATGC 1169165 0.40126914 7.130589 60-69
CACTT 901370 0.39996663 6.9490547 3
AGCTT 925295 0.3929741 7.5474677 1
GGTAA 1026150 0.392536 7.498739 120-129
CCTAA 939745 0.3924212 7.8880324 110-119
ACGAG 1262620 0.39031708 8.233548 180-189
CAATG 974950 0.38966185 5.201956 120-129
TTTGA 729565 0.38341713 6.338563 45-49
TACCT 844365 0.37467167 5.310965 2
CCGCG 1641325 0.37415227 6.921812 220-229
CCGGG 1628380 0.35528153 5.06114 80-89
GAGGC 1369990 0.34808064 5.993963 35-39
TGGGC 1217695 0.32876015 9.648164 1
CGAGC 1234465 0.3277013 6.946303 180-189
TTCTT 553160 0.32275528 18.661907 1
TGCTG 909845 0.3175914 14.054004 1
ATGTG 734190 0.29843882 5.2227983 140-149
GCTTT 660150 0.2979234 5.2420363 45-49
CTCGG 1052630 0.29692945 5.2126794 6
CGCTT 810045 0.29542506 5.3945985 1
AACTT 559500 0.2891121 10.167813 3
GACTT 668310 0.28383222 6.445371 1
CTCTT 598380 0.28214732 8.701607 1
TCACA 637405 0.26616925 5.081274 5
TTGGC 747750 0.26101038 7.9012847 1
GCGAG 1019860 0.2591212 6.093141 240-247
GAGGT 815320 0.25633878 6.891293 7
TTCCT 530645 0.250209 6.418734 4
CCCTT 633840 0.24152091 5.4308577 3
TAACT 466720 0.24116962 6.941503 2
TCGGT 677820 0.23660053 6.127309 7
TGTAA 475630 0.23523316 8.221607 25-29
AATCT 447430 0.23120183 7.597275 2
GTCTT 511445 0.23081334 12.111927 1
CGGGG 1086190 0.22682233 8.887763 3
ATTGT 428220 0.22504765 5.1934237 240-247
CCTCG 738700 0.21771207 5.7272105 5
TGCTT 473675 0.21376787 11.161869 1
TCGCA 506970 0.17399721 6.0674863 5
TAGGC 468310 0.15383549 6.6809864 1
TTGCT 239480 0.10807649 5.693931 4