FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_2_SL248348.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_2_SL248348.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 13380132
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 60055 0.4488371265694539 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 51570 0.38542220659706494 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 51249 0.3830231271261001 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 46368 0.34654366638535405 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 43902 0.32811335493551186 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 43604 0.32588617212446036 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 41569 0.3106770546060383 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 41218 0.3080537621004038 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 39953 0.29859944580516845 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 39667 0.29646194820798477 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 38686 0.28913018197428847 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38447 0.2873439514647539 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 38422 0.28715710726919585 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 37986 0.28389854449866414 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 37272 0.27856227427352737 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 36716 0.2744068593643172 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 36596 0.27351000722563873 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 36105 0.2698403872248794 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 36013 0.2691528005852259 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 34811 0.2601693316627967 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 34628 0.25880163215131213 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 34542 0.25815888811859256 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 34349 0.2567164509288847 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 34268 0.25611107573527675 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 32933 0.24613359569247897 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31323 0.23410082949854305 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31054 0.23209038595433887 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30487 0.22785275959908316 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 30388 0.22711285658467342 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29581 0.22108152595206088 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 29444 0.22005761976040294 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 29145 0.21782296318152913 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27946 0.20886191556256695 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27912 0.20860780745660806 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27675 0.2068365244827181 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27017 0.20191878525563123 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26690 0.19947486317773247 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26547 0.19840611437914063 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 26504 0.19808474236278087 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25389 0.18975149124089358 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 25293 0.1890340095299508 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 25283 0.18895927185172762 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24738 0.184886068388563 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24645 0.18419100798108717 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24063 0.17984127510849668 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23953 0.17901916064804144 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23324 0.1743181606878019 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23167 0.17314477913969759 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22628 0.16911641828346685 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 22308 0.16672481258032432 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 21912 0.16376520052268542 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 21869 0.16344382850632563 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21649 0.16179959958541515 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21443 0.16026000341401714 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21019 0.15709112585735327 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20545 0.1535485599095734 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 20208 0.15102990015345139 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 20105 0.1502601020677524 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 19480 0.14558899717880214 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18365 0.13725574605691482 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 17727 0.13248748218627437 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 16820 0.12570877477142978 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16545 0.12365348862029164 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16208 0.12113482886416965 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15649 0.11695699265149252 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 15142 0.11316779236557606 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14614 0.10922164295539087 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14457 0.10804826140728657 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 13859 0.10357894824953894 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 27637140 8.231484 69.86518 35-39
TGGAT 20726170 7.6354837 83.25964 35-39
TATTA 12015465 7.001191 146.31189 240-247
TCACC 21227715 6.919378 78.96185 160-169
TCTCC 18754150 6.4712906 89.8389 20-24
TCCCT 17640405 6.0869827 74.04229 15-19
AGTGG 21375200 6.085634 41.178722 100-109
CTGTG 18457555 5.819544 91.29316 25-29
CTGAG 18732420 5.5792904 53.019604 15-19
TGTAT 11068450 5.2762585 67.79882 240-247
TGGGT 17424685 5.251585 47.41206 100-109
TTCAC 12839305 5.176518 80.15917 40-44
TTACT 10106200 5.0398374 126.27743 240-247
CTCCA 15443420 5.033931 44.595734 80-89
CCTGA 15885305 4.9495993 54.819668 15-19
CTCTG 14858440 4.900917 76.63496 35-39
ATTCA 10290485 4.8476887 121.33256 40-44
ATTAC 9931200 4.6784353 121.614 240-247
AAGGG 17394045 4.678068 41.090385 90-99
TGAGA 13268905 4.6176696 101.32902 15-19
TCTGG 14522465 4.5788364 139.10007 35-39
GAAGG 16739890 4.5021353 33.92865 150-159
ACACG 15132590 4.4540796 57.550385 230-239
CCAGG 18487475 4.4517446 56.018066 80-89
GAGAC 15668015 4.408281 87.59692 8
ACCAT 11465610 4.366803 71.77726 160-169
TCCAG 13972160 4.353494 43.772255 80-89
GACAC 14694165 4.325034 54.030666 230-239
CCCTG 16214365 4.323861 88.31088 10-14
TGGAG 15138200 4.3099275 40.214962 90-99
GGGTC 17651000 4.30093 133.53986 8
ACTAC 11281200 4.296569 37.285583 130-139
TCAGT 11107170 4.2806554 93.80973 7
AGCCT 13663120 4.2572026 55.428413 30-34
TACTA 9011040 4.2449617 32.303497 130-139
CAGCC 16844505 4.2432656 60.10786 30-34
CACCA 13574045 4.1796827 61.072166 160-169
TACTG 10833185 4.1750627 90.44981 240-247
AGACT 11398700 4.14985 74.90971 15-19
GACTC 13280265 4.1379113 55.16304 20-24
GATTC 10650415 4.104624 62.639366 40-44
CACCT 12456310 4.060254 45.75963 40-44
CTGGG 16574065 4.0385184 140.2242 3
TGAAG 11182765 3.891678 43.596706 150-159
CAAGA 11247115 3.8680182 48.50868 180-189
GCTGG 15622775 3.806722 34.98913 90-99
ACTCT 9335400 3.7638226 72.78176 20-24
ACTGG 12614105 3.7570028 45.13706 60-69
CCTGT 11228275 3.7035418 63.777843 25-29
ACTGT 9475695 3.651892 77.78545 240-247
GTATT 7489135 3.570022 77.53933 240-247
GAGTG 12467980 3.5497015 39.95887 100-109
TCCTG 10757605 3.5482953 65.06772 20-24
GGATT 9619940 3.5439687 59.60344 40-44
GGTCC 13844235 3.5289977 149.70486 9
CTCCT 10147270 3.501408 96.66854 20-24
TATCT 6936790 3.4592917 55.935814 200-209
GGACA 12257370 3.448678 31.80027 220-229
AGACA 9930435 3.4151957 40.833485 170-179
CATCT 8278555 3.3377264 35.077705 170-179
GTCCC 12366950 3.2978761 79.20933 10-14
GTCTC 9960635 3.285422 33.609756 30-34
CTGCA 10517240 3.2769983 45.593975 25-29
CCATC 10021750 3.2666857 35.944283 45-49
AGCTG 10954660 3.2627513 37.942978 60-69
AGTAG 9209980 3.2051356 30.927893 50-59
GGAGT 11224010 3.1955364 38.72939 90-99
CCTCA 9600455 3.1293607 79.80688 5
AAGAA 7749970 3.1142254 41.47771 180-189
AGGGA 11456905 3.0812948 42.952663 80-89
GGCTG 12258200 2.986894 36.1887 90-99
GGAAG 11045920 2.9707618 32.22341 80-89
GTGAA 8530495 2.9686704 42.407486 150-159
ACCTT 7239970 2.9189923 73.499146 40-44
GACAA 8473540 2.9141521 27.379845 180-189
CAGGG 12563140 2.8917549 38.188965 80-89
ATCTC 7154215 2.884418 52.23008 170-179
GAGCT 9633295 2.869194 31.328485 60-69
TGTGC 9054395 2.8547904 60.720436 25-29
CTATG 7364555 2.8382678 28.555794 50-59
GGGAA 10364075 2.787382 35.659683 80-89
GAACA 8096985 2.7846503 40.78764 210-219
CGCCA 10984660 2.7671237 42.257782 70-79
ATGAA 6457465 2.7468934 31.611029 210-219
ATCTG 7046535 2.7157042 41.349327 200-209
AGAAC 7774385 2.6737046 33.976208 190-199
AGGCT 8878470 2.644376 21.456379 80-89
GAGTC 8809010 2.623688 28.168041 150-159
AGGGC 11389590 2.62163 34.456646 150-159
TGCAA 7159115 2.6063724 40.16985 200-209
CCAAG 8795650 2.588884 42.322895 180-189
CAGTG 8638460 2.572891 72.521164 8
ATCAG 7052425 2.5675302 28.026014 45-49
CCCTC 9192270 2.564389 27.175907 20-24
CTCTC 7322130 2.5265677 103.177246 20-24
CACTG 8088710 2.5203085 20.102842 30-34
GCAGC 10443280 2.5147195 36.767727 30-34
CTACA 6578390 2.505452 19.62634 190-199
CTTCA 6135680 2.4737678 52.62574 45-49
CTACT 6132975 2.472677 22.844454 50-59
GGGCT 10095645 2.4599547 43.95802 90-99
GTGGA 8569375 2.4397476 26.642588 100-109
CTGTC 7396400 2.4396331 48.828842 30-34
TATGC 6268350 2.415795 21.498783 50-59
GTGTA 6523225 2.4031444 40.08153 230-239
TATAT 4123000 2.4023962 28.72617 240-247
CAGGC 9966600 2.399936 34.46576 70-79
CCGCC 11059295 2.3843322 36.03871 70-79
GCTCC 8925215 2.3800735 36.136044 80-89
TGAAC 6514510 2.3716948 43.37644 210-219
GTGGT 7856480 2.367846 32.864094 120-129
GCCTC 8855170 2.361395 69.24117 4
GTATC 6113630 2.3561666 26.06359 200-209
CAAAT 5290485 2.3543153 40.60616 200-209
GTAGT 6389000 2.353696 28.009117 120-129
CAGTA 6461020 2.3522213 22.827145 45-49
TCCAA 6170230 2.3499994 46.168842 180-189
ACAAC 6513875 2.3435605 22.610367 180-189
TGGTG 7720805 2.3269553 34.196064 35-39
CACGG 9607230 2.3134005 50.629906 230-239
GGGGG 12655190 2.2779837 99.91921 5
ACAGC 7712570 2.270094 31.221869 210-219
GCTAT 5867895 2.2614613 34.831615 50-59
AAATG 5301410 2.2551277 38.24571 200-209
TCTGT 5511720 2.2486596 25.751741 210-219
TGCAG 7527165 2.2419014 46.38188 30-34
AATGA 5255265 2.2354984 29.78405 210-219
TACAT 4744535 2.2350771 18.492073 190-199
CCTCT 6469155 2.232241 51.81142 35-39
CCTTC 6461615 2.2296395 57.150974 45-49
GTGGG 9534915 2.2208564 31.411333 100-109
ACGGC 9099140 2.1910534 55.667473 230-239
GGCCG 11042120 2.1752696 27.036098 230-239
TATCA 4603255 2.1685224 18.120329 170-179
GCAGA 7611420 2.1415143 26.832119 140-149
TCCGC 8003740 2.1343453 44.47021 70-79
AACTA 4792830 2.132854 37.20375 130-139
GGCTC 8305285 2.1170785 20.066004 40-44
CAGAG 7477875 2.1039405 35.765617 170-179
GCCTG 8218250 2.0948925 33.438404 210-219
TGCAC 6705855 2.089434 27.000702 25-29
CTCAC 6398065 2.0855105 54.9334 20-24
TGGTA 5649330 2.081203 32.44204 120-129
TCTAT 4168760 2.0789092 19.9793 110-119
AGCAC 7013260 2.064261 22.38444 130-139
TTCAG 5334450 2.055874 48.98443 45-49
GCCAG 8473825 2.040479 37.447742 70-79
AACAG 5913245 2.033636 39.11767 210-219
CATAT 4312475 2.0315404 14.671441 160-169
GGTCT 6430405 2.027464 34.22906 15-19
ATATC 4300300 2.0258052 14.149766 170-179
GCTGT 6402410 2.018637 22.601385 230-239
TAGTA 4440305 1.9995041 19.280308 120-129
CCAGA 6766185 1.9915378 37.705536 170-179
TGGGG 8497990 1.9793377 130.02065 4
ATGGA 5686840 1.9790591 12.420192 120-129
AGAGT 5678320 1.9760939 31.053934 150-159
ATACT 4192075 1.9748222 29.957743 130-139
CAGAC 6690045 1.9691268 29.212938 140-149
AGAGA 5981320 1.9663239 31.416386 170-179
CTGTA 5095120 1.9636372 27.521765 190-199
ACTAT 4163320 1.9612758 17.627905 130-139
TGAGC 6571050 1.9571308 17.986948 200-209
TCTCT 4539440 1.9374398 33.27342 35-39
TCCAT 4784325 1.9289317 27.5494 45-49
GGATC 6467875 1.926401 18.54655 70-79
GCACA 6517155 1.9182389 19.653208 130-139
CTATT 3838575 1.91425 20.864582 110-119
GGTGG 8201920 1.9103775 18.34618 40-44
TAGTG 5165470 1.9029497 27.7451 120-129
GATGG 6652650 1.8940451 20.313948 100-109
ACCCT 5809615 1.8936999 43.208088 10-14
GTCAC 6029950 1.8788329 38.27507 160-169
TTCCA 4655165 1.8768575 25.253822 180-189
TGTGA 5092005 1.8758855 19.707472 210-219
CATGA 5139160 1.8709803 26.052055 60-69
TGGGA 6563580 1.8686869 16.160135 100-109
CAGTT 4839160 1.8649913 25.6899 190-199
ACCAG 6301425 1.8547418 14.825393 190-199
CCTGC 6945980 1.8522743 48.277836 20-24
GTGCA 6218320 1.8520733 54.2182 25-29
AGCTA 5054060 1.8399985 27.324144 50-59
TCAGC 5888010 1.8346066 11.525583 45-49
CCGTG 7187125 1.832051 21.303965 230-239
TGTCT 4466580 1.8222659 49.98175 30-34
GCCGA 7521280 1.8111082 22.603308 220-229
AGTCA 4944920 1.8002646 29.72616 160-169
TACAA 4042280 1.7988524 18.17689 130-139
CAAGG 6338970 1.7835038 17.095337 80-89
CACAG 6005745 1.7677122 15.856237 140-149
ACCTG 5657595 1.7628131 30.867403 25-29
GCAAA 5122380 1.7616479 36.544567 200-209
CTCAG 5627705 1.7534999 75.96718 6
ATGCA 4783805 1.7416086 16.745329 60-69
AACAC 4809620 1.7304038 25.674566 190-199
ATTGG 4685415 1.7260984 20.623363 100-109
CCTGG 6749550 1.7205101 36.39568 2
AGGGG 7813570 1.7191882 34.67793 90-99
AGTTC 4444720 1.7129759 22.618557 190-199
AGGAC 6068010 1.7072674 23.67701 220-229
GGATG 5982675 1.7033 21.855185 100-109
TTCTG 4164375 1.698973 41.165897 30-34
CGATT 4398915 1.6953228 37.2278 160-169
TCTCA 4197220 1.6922244 28.858236 100-109
GGGGC 8963760 1.6879575 30.051329 90-99
AGTTA 3703380 1.667661 16.643196 50-59
GCTGA 5568180 1.6584344 27.323301 200-209
GGGCC 8376205 1.6500912 27.274256 2
GGAGC 7136380 1.6426357 13.092202 200-209
GAGGA 6092650 1.638597 30.950241 220-229
ACAAT 3668825 1.6326615 25.931316 180-189
GTCCG 6399450 1.631267 36.239307 70-79
TTAGT 3418165 1.6294172 27.7763 110-119
CAGCT 5221350 1.6268864 13.167184 50-59
GCACT 5176420 1.6128869 26.060764 25-29
TGACC 5166030 1.6096498 14.774112 210-219
TCTGC 4858410 1.602501 37.240685 200-209
AGTGA 4546065 1.5820614 84.51163 9
CTGAA 4337005 1.5789452 24.287153 200-209
CTTTA 3143315 1.5675324 44.014473 45-49
TAGCA 4289340 1.561592 12.789728 130-139
CCATG 5007155 1.5601468 15.748046 160-169
TACGC 4947395 1.5415266 26.819555 140-149
CGTCC 5779315 1.5411612 19.366102 180-189
ACTCC 4713285 1.5363406 18.790365 140-149
GTTAC 3960080 1.5261977 15.931759 50-59
GGCTT 4811395 1.5170009 20.977913 25-29
CATCA 3936320 1.4991907 32.549164 45-49
CTCCC 5318310 1.4836612 14.034658 190-199
GGGGT 6362940 1.4820454 125.07263 7
GTTCT 3632180 1.4818491 23.528324 190-199
CTACG 4690125 1.4613655 17.154814 130-139
CTCAA 3836910 1.4613291 19.561117 150-159
CAACT 3829910 1.4586632 17.85215 130-139
TTCTC 3384955 1.4447039 22.168392 190-199
GAGCA 5127785 1.4427303 7.7211714 200-209
CTGGT 4575485 1.4426199 31.409485 35-39
GAACT 3900975 1.4202024 16.62491 190-199
GGCAG 6102215 1.404594 13.494949 150-159
TCTGA 3641200 1.4033027 22.654974 220-229
CAATT 2974830 1.4013965 26.901604 180-189
CAACC 4534135 1.3961384 16.045916 140-149
ACATA 3131085 1.3933622 23.645494 130-139
AACCC 4514965 1.3902357 20.939848 140-149
GCCGT 5400045 1.3765112 31.772182 230-239
CCTTT 3217665 1.3733045 50.554874 45-49
GTCCA 4405635 1.3727231 29.247032 180-189
CCATA 3604180 1.3726915 15.121695 160-169
ATCTA 2910205 1.3709527 20.971312 110-119
AATTC 2901045 1.3666376 26.810797 180-189
TGGAA 3922660 1.3651124 20.042341 120-129
TCCGT 4136860 1.3645045 14.689445 150-159
ATACA 3049335 1.3569827 22.22511 35-39
TCAAG 3702590 1.3479776 24.03607 150-159
AGCAG 4768710 1.3417023 13.61325 50-59
AAGCT 3670280 1.3362148 17.438744 200-209
GTGGC 5477565 1.3346907 14.405789 40-44
CACGT 4259595 1.3272195 17.522598 180-189
TGTCC 4019630 1.3258374 53.71406 15-19
TTACA 2813355 1.3253281 9.81025 120-129
GTGAC 4410570 1.3136504 15.748926 210-219
TCACT 3253315 1.3116632 15.308302 190-199
GGCCT 5123120 1.3059211 66.13655 3
ACAGT 3573715 1.3010591 12.625101 120-129
AAGAG 3921105 1.2890401 19.547604 150-159
GATTG 3483215 1.28321 23.927776 100-109
ATCCG 4117355 1.2828997 24.437897 70-79
CGGCC 6223490 1.2825785 33.970627 230-239
ATTAG 2838930 1.2783924 27.585487 110-119
GAGAG 4752310 1.2781173 30.431322 220-229
CCAGT 4086335 1.2732346 19.769966 190-199
ACAGA 3700635 1.2726929 20.291304 140-149
CGACA 4315955 1.2703446 16.165394 70-79
ACATG 3487450 1.2696531 14.481445 190-199
ACGCA 4294805 1.2641194 23.252491 140-149
AGACC 4275250 1.2583636 99.526596 9
AACCA 3460455 1.2450017 18.716816 190-199
AGTCG 4141900 1.2336293 16.222929 150-159
TACCA 3221945 1.2271131 10.625156 45-49
GATCC 3934025 1.2257771 24.279629 70-79
GTGCG 5026500 1.2247819 18.692207 240-247
ACGTC 3927485 1.2237394 19.280458 180-189
CCTAC 3731235 1.216232 17.145697 190-199
TGGAC 4078325 1.214694 15.518293 80-89
TGCGA 4078170 1.2146479 15.912225 240-247
CTTCT 2830250 1.207955 22.331495 30-34
CTTCG 3633920 1.1986146 103.483826 3
AGAGC 4249835 1.1957141 29.332712 220-229
ATTCC 2958870 1.1929495 24.761019 180-189
GTCGA 3988670 1.187991 12.636506 150-159
GAAGT 3405065 1.1849858 13.509314 140-149
ATTAT 2032390 1.1842363 9.257965 50-59
GGACT 3969270 1.182213 13.024737 90-99
CCGAT 3791180 1.1812692 25.493902 160-169
ATATT 2025835 1.180417 30.570107 240-247
TGAGT 3175300 1.1697748 20.40766 90-99
TCGGA 3909080 1.1642859 92.889786 5
ATCAT 2468410 1.1628299 15.629455 110-119
GCAAG 4090000 1.1507436 16.52154 25-29
TTGGG 3806620 1.1472683 15.120165 100-109
TGTGT 2936025 1.145004 16.586065 240-247
TTATT 1853335 1.1431811 20.302528 240-247
ACACA 3173955 1.1419249 7.897926 130-139
TCGAG 3818135 1.1371987 12.2598295 150-159
ATGAG 3266630 1.1368093 22.15522 60-69
CGCTG 4456535 1.1360036 13.877401 190-199
TTCGG 3593620 1.1330445 99.0786 4
CGTGT 3591465 1.1323649 25.25762 230-239
CGGCT 4440895 1.1320169 24.51214 230-239
CACAT 2971610 1.1317703 15.726321 130-139
AAGGC 4013500 1.1292199 28.562563 25-29
CGCAG 4684700 1.1280657 18.210295 140-149
GGGTG 4830445 1.1250992 13.868751 60-69
GTAGC 3766175 1.1217228 12.359449 50-59
GCTTC 3372675 1.1124452 27.160515 2
AGGTC 3700275 1.1020951 17.824448 10-14
CTCCG 4132570 1.1020263 10.838097 140-149
TAGAC 3024275 1.101028 17.886354 170-179
CGTGA 3681290 1.0964404 22.331188 150-159
GCACC 4322100 1.0887716 11.573907 130-139
ATCAA 2442510 1.0869398 12.734945 110-119
GAACC 3691760 1.086621 10.794363 180-189
GCCCC 5039700 1.0865357 12.233241 80-89
AGGCC 4495865 1.0825948 13.788984 2
GACCC 4291565 1.0810796 42.45075 10-14
ACAAG 3142750 1.0808295 17.52031 80-89
AGCTC 3464165 1.0793766 13.2840185 210-219
CTATA 2290465 1.0790027 13.906783 50-59
CTTGA 2780800 1.0717083 21.647089 90-99
TAGTT 2246235 1.0707657 15.124234 50-59
TTTAG 2234770 1.0653005 32.401794 45-49
ATGGG 3739180 1.0645648 19.233732 100-109
TTGAG 2879345 1.0607454 20.134304 90-99
ATGGT 2864510 1.0552803 9.698841 35-39
CAGCA 3566150 1.0496494 12.378679 45-49
GCCAA 3565445 1.0494419 16.494078 180-189
GAAGC 3721100 1.0469517 13.661338 200-209
CCCCT 3742655 1.0440972 9.353266 140-149
TGGCT 3309835 1.043569 31.30349 40-44
GGAGA 3875160 1.0422108 83.5942 7
GTATA 2312125 1.041168 11.659532 240-247
CATAC 2718485 1.0353649 15.898688 130-139
TACAG 2826605 1.0290636 8.948455 120-129
TTTCA 2063430 1.0290071 8.153339 100-109
TTATA 1765945 1.0289837 14.205069 110-119
ACTCA 2685010 1.0226156 14.342745 190-199
GGGAG 4621255 1.016796 13.786192 5
AACTC 2666290 1.0154856 18.565983 190-199
AAACT 2258685 1.0051359 17.06203 130-139
GATCT 2602080 1.0028304 9.933314 220-229
GACAG 3532260 0.9938205 15.482389 70-79
CGAGT 3319180 0.98858917 15.618423 160-169
AAGGT 2836860 0.9872465 20.130016 15-19
ACACC 3189425 0.982079 13.00465 40-44
GTAGA 2809515 0.9777304 17.620098 170-179
TCATA 2069305 0.97481763 9.190553 110-119
AACTG 2671600 0.9726319 12.966118 60-69
CCGTC 3635845 0.9695654 10.373928 140-149
ATGAT 2151920 0.96902645 9.183167 120-129
CCAAC 3142340 0.96758074 14.27217 130-139
ACCAA 2687935 0.9670646 17.58093 130-139
GAGCC 4011710 0.9660112 21.445 220-229
ATGAC 2631175 0.9579146 11.104747 160-169
GATAC 2614125 0.9517073 23.815525 35-39
TATGG 2582455 0.9513718 12.475176 35-39
GCCAT 3044900 0.94874054 8.260526 60-69
GGGAC 4115575 0.94731367 9.990883 90-99
GCAGT 3168450 0.9436955 6.576504 50-59
AATCA 2114070 0.94078094 14.2350645 110-119
GCTCT 2849330 0.9398248 18.318308 210-219
TAACA 2105205 0.936836 9.022103 120-129
AGCCG 3866875 0.9311352 22.506418 220-229
GTTAT 1951920 0.9304676 11.347236 110-119
GGTAG 3260875 0.9283888 13.018728 120-129
CGAGG 4033215 0.9283562 17.190413 220-229
AGCCC 3677125 0.92629725 11.758561 80-89
ACAGG 3276205 0.92177814 15.060936 70-79
GGTAT 2491680 0.9179304 9.554757 110-119
CAGAA 2665400 0.91666305 18.179487 140-149
AGATC 2516750 0.91625667 12.877993 210-219
TACAC 2386165 0.90879714 22.137114 35-39
AAGTT 2007575 0.90402675 17.496908 140-149
TGGTT 2317285 0.90370506 9.259494 50-59
CCCAG 3585375 0.9031847 14.819722 80-89
CCGAG 3677365 0.8855017 21.047583 220-229
TGAGG 3109540 0.88530284 12.571486 220-229
ATAGT 1947445 0.87694985 16.059286 120-129
ACGCT 2808305 0.87502146 17.270576 190-199
ACCGC 3454755 0.8702805 12.004897 220-229
CCCCA 3300880 0.8698835 16.880396 80-89
CGGAG 3777475 0.86949056 71.67038 6
GACTG 2912250 0.8673886 12.674353 90-99
GTTTC 2108420 0.8601887 5.6873937 100-109
GATGA 2467545 0.8587224 7.110323 60-69
GGTTC 2719035 0.8572936 12.287345 160-169
TGGCA 2849255 0.8486262 5.8434396 100-109
TCCTT 1983545 0.84657997 10.706756 1
AGAAG 2568650 0.84442854 15.891436 140-149
TCTTC 1954060 0.83399576 44.48989 2
TTTAT 1348855 0.83200586 11.160862 240-247
CGGAC 3452490 0.8313522 11.135562 220-229
GATCA 2267950 0.8256777 8.957827 110-119
ATATA 1491660 0.8210535 12.174288 130-139
TATAC 1740940 0.82013 10.122033 130-139
TTATG 1712615 0.81639254 11.910981 50-59
GTTCA 2106860 0.81197476 15.1138935 160-169
ATCCA 2128170 0.8105369 9.535319 180-189
AGTCT 2100800 0.8096392 14.6075735 8
CGTAT 2087950 0.80468684 8.477734 240-247
TCATC 1985840 0.8006458 9.9681015 110-119
TTACC 1981825 0.7990271 9.382854 45-49
GGTGC 3267715 0.79622763 11.194134 60-69
GTCTG 2524830 0.79606205 14.824489 1
GTCTA 2064915 0.7958093 10.116686 30-34
GAGAT 2285345 0.79531556 12.346071 210-219
GCTTG 2518510 0.79406935 16.336443 90-99
ATATG 1760865 0.7929314 5.586557 50-59
CTATC 1966085 0.7926811 7.802107 110-119
GCCTA 2517745 0.7844877 16.505024 190-199
TGATG 2129430 0.78447807 12.266467 120-129
CATTA 1664250 0.7840025 13.462297 110-119
TATTT 1268800 0.782626 10.009065 240-247
CATGG 2614980 0.7788493 8.630317 200-209
AACGC 2598565 0.7648535 16.319996 180-189
ACATC 2003130 0.76291406 5.9559383 110-119
ACAAA 1814405 0.76273495 13.127966 130-139
ATGCC 2436900 0.75929785 8.768789 50-59
GGTTA 2045655 0.7536156 8.289839 50-59
CCAGC 2986155 0.7522364 6.6016855 80-89
TGCCA 2404755 0.74928194 7.92454 60-69
CAACG 2536370 0.7465472 16.604237 180-189
CCTCC 2661605 0.74251413 10.252989 140-149
TCAAC 1936110 0.73738873 7.5364366 110-119
TATGA 1634805 0.7361656 5.0156493 50-59
TATAG 1620405 0.7296811 6.595705 120-129
ATAAA 1395910 0.72582054 8.133123 130-139
TTGGA 1963340 0.7232909 6.3834844 60-69
ATCTT 1446960 0.7215811 12.298277 3
ACGCC 2862390 0.72105896 14.435261 180-189
GGGAT 2528845 0.7199758 12.899621 100-109
GAAAT 1687435 0.71780556 7.500784 110-119
AATAC 1569745 0.69855124 12.042778 130-139
GGATA 2004735 0.69766146 15.21787 35-39
TCCGG 2733445 0.6967752 11.38445 70-79
TGACT 1790050 0.68987757 5.0757217 2
GGGCA 2982685 0.68654764 13.5204735 150-159
CATCC 2078490 0.6775038 6.478493 110-119
TTTAC 1345005 0.6707374 12.856344 45-49
TATTG 1405065 0.66978544 6.073692 240-247
GACCA 2264865 0.66663325 6.204713 170-179
CAAAC 1851045 0.66596854 13.767907 130-139
CACAA 1847995 0.6648712 8.46859 130-139
CCCCC 2946530 0.6645682 13.250337 80-89
AAATA 1260280 0.655298 13.360592 130-139
TAGCT 1690415 0.65147865 13.422086 50-59
CACGC 2584360 0.651021 13.9934635 190-199
CCCGT 2430560 0.64815384 10.164976 140-149
GATTA 1436295 0.6467749 5.4946284 50-59
AGCAA 1877390 0.64565694 5.2772837 50-59
AGGCA 2294060 0.6454463 6.5722327 80-89
GCGGA 2797170 0.64384615 9.341933 220-229
GCGAC 2671255 0.64323246 6.982219 70-79
TCAAT 1352160 0.6369817 8.559272 110-119
GACCG 2641480 0.63606274 9.575582 210-219
CTGAC 2036435 0.6345196 9.748359 220-229
TTCAT 1269515 0.6330915 5.120445 100-109
ACTTC 1554895 0.6268985 30.467253 4
CAGTC 2004265 0.62449586 5.9123745 210-219
AGATG 1793295 0.6240788 6.0877085 120-129
AAGCA 1807020 0.62145585 6.0761223 120-129
TTAGC 1608045 0.61973363 10.67485 45-49
TTTCT 1163995 0.61448246 9.559824 4
AGTAA 1420425 0.6042241 5.3212233 50-59
ACCTA 1570670 0.5982069 7.62485 130-139
CGCCG 2866965 0.5908433 11.40709 220-229
AATGG 1696375 0.59035003 6.6558285 120-129
CCCTA 1796130 0.58546585 11.676745 110-119
AATAA 1122195 0.583499 7.546062 130-139
CGGTT 1835490 0.57871777 12.199846 160-169
CACCG 2264105 0.57034624 9.331967 45-49
CCGGC 2757220 0.5682264 9.170974 70-79
GCCGC 2719340 0.5604198 12.547328 220-229
TCCAC 1702240 0.5548614 9.899069 180-189
GTTCC 1681695 0.5546914 6.581334 140-149
TTCAA 1172665 0.5524244 6.3894606 200-209
CACGA 1871095 0.55073225 8.505304 180-189
GGCCC 2661365 0.5484719 9.745086 70-79
GACGA 1942425 0.54651177 9.933429 220-229
TCAGG 1833350 0.5460475 5.27171 150-159
ACCCG 2157165 0.5434072 9.119091 140-149
TAATA 985910 0.5426738 8.187431 130-139
TGATT 1133130 0.5401557 5.863267 50-59
GGTGA 1893660 0.5391353 6.3096566 120-129
CGGCA 2234745 0.5381218 10.697112 70-79
ACATT 1134510 0.5344502 6.9132 110-119
TACTT 1067080 0.53213966 11.3013735 1
GCTAC 1690080 0.526601 7.7385163 50-59
GGGGA 2383400 0.5244099 8.500103 4
CCGTA 1676700 0.522432 7.5222564 230-239
AAGAT 1224470 0.5208683 5.7939544 120-129
GTCCT 1558400 0.51402366 6.465653 45-49
CTTTG 1257820 0.51316273 6.9603915 45-49
AAATC 1149815 0.51167846 8.064958 110-119
ATTTC 999440 0.4984084 6.4527698 240-247
GTAAC 1357780 0.49431804 7.026614 120-129
TATGT 1032890 0.492372 7.115607 140-149
ACGAC 1657410 0.48783684 9.328043 220-229
GGGTT 1610335 0.48533508 6.074244 100-109
CTGCG 1903735 0.48527607 11.9074135 25-29
GGAGG 2186745 0.48114064 5.4055552 6
CCGGT 1868830 0.47637856 9.556556 160-169
TGGCC 1862940 0.47487718 14.155246 2
CATAA 1065095 0.47397724 6.4495745 110-119
ATTAA 853980 0.47005564 6.7582355 110-119
AGTAT 1043140 0.46973407 5.4374566 110-119
ACCCC 1762940 0.46458903 8.894164 140-149
CAATC 1218250 0.4639839 6.4385867 110-119
CCACG 1837325 0.46283692 7.4070573 180-189
GAAGA 1395345 0.45871148 5.9979672 15-19
AACAT 1027820 0.45738947 6.30286 110-119
GGGTA 1604215 0.45672873 5.033549 100-109
GGTTT 1167395 0.45526585 5.8135376 100-109
TATCC 1119750 0.45145792 5.026672 110-119
ATTTA 770210 0.44878724 5.0094395 110-119
ATGCT 1150290 0.44331682 6.667274 50-59
CCATT 1099300 0.44321293 5.2484164 110-119
GCATG 1474775 0.43924907 8.890733 60-69
TAAAT 789865 0.43476492 8.128339 130-139
TGCTA 1125930 0.43392855 5.8792524 50-59
CTGTT 1038625 0.42373598 5.008717 240-247
ATTCT 846235 0.42200696 7.4150643 2
TGCGC 1637715 0.41746563 8.833637 25-29
CGCGG 2105220 0.41472298 6.690981 220-229
ATGGC 1367015 0.40715367 7.0332327 1
TGACG 1363330 0.4060561 8.790345 220-229
CTAAC 1065145 0.40567216 5.666214 110-119
GGTCA 1347975 0.4014828 5.197896 160-169
GCGCT 1568665 0.39986426 8.00889 25-29
CATGC 1249450 0.38930798 7.0114436 60-69
CCTAA 1021060 0.3888819 7.8528075 110-119
CACTT 960505 0.3872539 7.041242 3
GGTAA 1093615 0.3805855 7.348485 120-129
TCAAA 851665 0.3789989 5.4286127 200-209
GCCTT 1143250 0.3770903 8.773387 1
CCGCG 1813195 0.37367538 6.9956613 220-229
AGCTT 957375 0.3689682 7.088643 1
TTTGA 753045 0.35897171 5.9651427 45-49
ACGAG 1275095 0.35875487 7.4717236 180-189
TACCT 877150 0.35364708 5.185407 2
GAGGC 1409730 0.32448843 5.425674 35-39
TGGGC 1318250 0.32121134 8.78647 1
TTCTT 607705 0.32081243 19.039255 1
TGCTG 1013335 0.31949776 14.676281 1
ATGTG 820770 0.30237016 5.3926272 140-149
CGAGC 1245150 0.29982945 6.262351 180-189
CGCTT 871275 0.2873819 5.51857 1
GACTT 717210 0.27640963 6.973114 1
AACTT 585445 0.2757941 10.705184 3
CTCTT 638325 0.27243805 8.58701 1
TCACA 704535 0.2683299 5.459608 5
GAGGT 882775 0.25133082 6.8771377 7
GCGAG 1084510 0.24963002 5.789514 240-247
TAACT 515565 0.24287476 7.551387 2
TTGGC 769810 0.24271595 6.842581 1
CCCTT 690920 0.23840825 5.819967 3
TTCCT 547465 0.23365888 6.350228 4
GTCTT 562565 0.22951405 11.690231 1
AATCT 484445 0.22821456 7.679292 2
ATTGT 469710 0.22390772 5.086215 240-247
TGTAA 464680 0.20924903 7.337906 25-29
CGGGG 1108205 0.20868506 8.40926 3
CCTCG 748300 0.19954807 5.4221563 5
TGCTT 480720 0.19612311 11.037337 1
TCGGT 541755 0.17081174 5.807529 7
TGCCT 508315 0.16766293 5.082468 4
TAGGC 476890 0.14203759 6.579868 1
TTGCT 261805 0.10681065 5.813906 4