FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_4_SL248350.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_4_SL248350.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 11785512
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 58851 0.4993503888503104 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 48968 0.4154931919801193 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 44507 0.3776416332188199 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 41812 0.35477457407026525 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 41601 0.3529842403113246 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 41451 0.3517114911935943 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 39350 0.33388451855125173 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 38686 0.3282504824567656 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37712 0.3199860981856367 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35418 0.3005215216784812 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 34782 0.29512506541930467 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 34451 0.29231653236617977 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31898 0.2706543423824099 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31570 0.2678712643116396 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 30981 0.26287360277601857 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30952 0.2626275379465907 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 29718 0.2521570552047293 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 29277 0.2484151727986022 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28865 0.24491935522190297 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28799 0.24435934561010164 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 28488 0.24172051243934078 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28413 0.2410841378804756 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 28141 0.23877621948032468 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 27301 0.23164882442103493 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26605 0.22574326851476628 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26593 0.22564144858534785 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26177 0.22211169103217576 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25973 0.22038075223206255 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25764 0.2186073884613583 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25268 0.21439883137873006 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24908 0.21134423349617731 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24391 0.20695749153706688 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 24150 0.2049126079545802 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23956 0.20326651909564897 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 23428 0.19878644220123828 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23367 0.19826885756002796 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 23022 0.19534153458924822 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22974 0.19493425487157454 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22495 0.19086994268895574 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22259 0.18886748407706003 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20934 0.17762486687044227 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20860 0.17699697730569533 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20768 0.17621635784682074 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20567 0.17451087402906212 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 20493 0.1738829844643152 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 20323 0.17244053546422083 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 20129 0.1707944466052896 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19773 0.16777378869920967 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19259 0.1634125017224538 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 19153 0.16251309234592437 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 18934 0.16065487863403813 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18688 0.15856757008096042 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18169 0.15416385813361355 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17989 0.15263655919233718 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 17844 0.15140623504519787 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17733 0.15046440069807743 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 17527 0.1487164919097278 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17076 0.14488975956241867 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 17026 0.14446550985650858 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 16878 0.14320973072701465 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16873 0.14316730575642364 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16734 0.14198789157399355 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16112 0.13671022523247187 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16081 0.1364471904148076 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14141 0.11998630182549558 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13943 0.11830627299009157 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13943 0.11830627299009157 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13232 0.11227344217204988 No Hit
TTGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 13019 0.11046613842487284 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12889 0.10936308918950657 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12372 0.10497634723039609 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 11823 0.10031808545950317 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 24301960 8.256558 66.58352 35-39
TGGAT 18365515 7.7612877 80.274475 35-39
TATTA 10378760 6.9145494 143.73276 240-247
TCACC 18459980 6.7885346 76.71306 160-169
TCTCC 16021215 6.258719 85.27575 20-24
AGTGG 18890260 6.168821 40.727463 100-109
TCCCT 15588410 6.0896425 73.4936 15-19
CTGTG 15819890 5.7096095 85.70503 25-29
CTGAG 16000805 5.436252 49.767727 15-19
TGTAT 9437865 5.16144 67.20479 240-247
TGGGT 14877950 5.1612215 45.615845 100-109
TTACT 8979030 5.108814 127.41305 240-247
TTCAC 10687680 4.888788 75.56282 40-44
CTCTG 12849155 4.824708 73.70019 35-39
CTCCA 12978850 4.772886 41.102318 80-89
CCTGA 13406550 4.7387996 51.10737 15-19
ATTAC 8801115 4.7139306 120.64392 240-247
AAGGG 14881115 4.574615 40.406475 90-99
ATTCA 8493205 4.549012 113.85448 40-44
TCTGG 12545380 4.5277953 136.21811 35-39
TGGAG 13527000 4.41739 39.92365 90-99
GAAGG 14332725 4.406034 31.964996 90-99
ACACG 13195140 4.3905625 55.303017 230-239
TGAGA 10961560 4.360717 94.56282 15-19
TCAGT 9859545 4.3349204 97.45117 7
GACAC 13024270 4.3337073 51.763206 230-239
CCCTG 14316670 4.32181 85.39511 10-14
CCAGG 15779715 4.3100677 53.77176 80-89
ACTAC 9955210 4.2867 37.598927 130-139
ACCAT 9896070 4.261234 70.62683 160-169
TACTG 9611700 4.225951 91.23239 240-247
GAGAC 13140950 4.2028065 93.33183 8
TACTA 7841365 4.199883 29.537573 130-139
CACCA 12036430 4.16675 59.833237 160-169
CAGCC 14481590 4.115236 55.380215 30-34
TCCAG 11540530 4.0792193 40.51643 80-89
AGCCT 11485430 4.059744 51.133717 30-34
GGGTC 14535880 4.0539446 121.69976 8
CACCT 11014135 4.050376 45.427067 20-24
CTGGG 13922635 3.8829155 129.33342 3
GACTC 10960965 3.8743618 51.39693 20-24
GATTC 8805535 3.8715065 59.494778 40-44
TGAAG 9721355 3.8673396 40.437687 150-159
AGACT 9336290 3.8641448 69.39331 15-19
CAAGA 9794465 3.816055 47.31883 180-189
ACTGG 11204345 3.8066614 45.752235 60-69
GCTGG 13343950 3.7215247 32.938778 90-99
ACTGT 8303300 3.6506903 79.2777 240-247
CCTGT 9711910 3.6467092 60.549877 25-29
GAGTG 11157065 3.6434617 40.236862 90-99
GTATT 6533675 3.573178 77.19251 240-247
ACTCT 7725545 3.5338402 67.890526 20-24
GGATT 8279435 3.4988987 56.7227 40-44
TCCTG 9190460 3.4509108 63.320953 20-24
GGACA 10773540 3.4456491 31.359322 220-229
CTCCT 8674040 3.3885305 92.40395 20-24
AGCTG 9872245 3.354082 38.220947 60-69
GGTCC 11517860 3.3419645 138.32622 9
AGACA 8577375 3.3418603 40.31321 170-179
TATCT 5856005 3.331901 52.175922 200-209
GTCTC 8764980 3.291148 34.57525 30-34
CTGCA 9240540 3.2662444 47.754906 25-29
CCTCA 8861205 3.258649 82.16485 5
CCATC 8856815 3.2570355 37.37362 45-49
CATCT 7071060 3.234464 33.13608 170-179
GTCCC 10679220 3.223763 73.287384 10-14
GGAGT 9781400 3.1942232 38.415695 90-99
AGGGA 10184195 3.1307313 41.672318 80-89
AGTAG 7746110 3.08155 29.592722 50-59
AAGAA 6660445 3.0385394 40.888657 180-189
GGAAG 9682145 2.9763956 31.371405 80-89
GAGCT 8654450 2.940338 31.13234 60-69
CAGGG 11040620 2.8985767 36.915955 80-89
GTGAA 7272310 2.893063 40.176605 10-14
ACCTT 6300670 2.88207 73.13082 40-44
CTATG 6507320 2.8610563 28.53931 50-59
GGCTG 10240785 2.856076 34.007904 90-99
GGGAA 9176535 2.8209658 34.96272 80-89
GACAA 7217945 2.8122087 25.600737 180-189
ATCTC 6111770 2.7956629 48.875282 170-179
TGTGC 7729955 2.7898436 56.838066 25-29
ATCAG 6581075 2.7238042 29.251804 45-49
GAGTC 7962575 2.7052743 30.251032 150-159
CCCTC 8568760 2.691133 27.798233 20-24
CAGTG 7879510 2.677053 75.30156 8
ATCTG 6035840 2.653762 38.890198 200-209
AGGGC 9948610 2.6118834 33.37013 150-159
AGAAC 6673810 2.6002061 32.675816 190-199
CGCCA 9137155 2.5965066 39.659805 70-79
GAACA 6607330 2.5743043 37.920704 210-219
CTACA 5976700 2.5735586 20.548027 190-199
AGGCT 7556095 2.5671732 20.963446 25-29
CTGTC 6797895 2.5525305 51.356052 30-34
GTGGA 7804315 2.5485842 28.050611 100-109
CCAAG 7657305 2.5478985 41.254955 180-189
TGCAA 6138245 2.5405238 37.626312 200-209
CTACT 5544620 2.5362353 24.359339 50-59
ATGAA 5186715 2.5136175 29.904448 210-219
GTGTA 5947485 2.5134141 41.744 230-239
CACTG 7097960 2.508909 20.682215 30-34
TATGC 5648825 2.483604 22.180578 50-59
GCAGC 9037390 2.46847 34.534565 30-34
TATAT 3701640 2.4661107 27.225605 240-247
CTTCA 5289120 2.419364 51.387005 45-49
GTGGT 6938455 2.4069784 31.794931 120-129
TGGTG 6931815 2.4046748 36.317684 35-39
GGGCT 8532565 2.3796666 42.33008 90-99
TCCAA 5519085 2.3765101 46.19077 180-189
CTCTC 6074010 2.372824 95.42734 20-24
CAGTA 5728110 2.3707755 22.63275 45-49
CAGGC 8573375 2.3417294 33.530647 70-79
CCGCC 9516145 2.309467 33.487087 70-79
TATCA 4299610 2.3028972 18.746906 170-179
GCCTC 7620470 2.3004105 71.66005 4
GCTCC 7594325 2.2925181 33.442455 80-89
ACAAC 5633490 2.2835207 20.52581 180-189
CACGG 8303440 2.2679996 49.09424 230-239
GTATC 5147195 2.2630537 24.371578 200-209
CCTTC 5788630 2.2613397 55.7011 45-49
TCTGT 4839310 2.2602308 27.483019 210-219
GCTAT 5117770 2.2501163 34.980217 50-59
TACAT 4151795 2.2237267 19.235497 190-199
TGAAC 5330475 2.2062004 40.830162 210-219
ACAGC 6618330 2.202189 28.64984 210-219
GTGGG 8207075 2.200044 29.764933 100-109
AACTA 4359740 2.1981683 39.81816 130-139
GTAGT 5195265 2.195525 25.437298 120-129
CAAAT 4347240 2.1918657 37.372112 200-209
TGCAC 6153810 2.175181 28.278759 25-29
ACGGC 7853415 2.1450796 54.353504 230-239
TGCAG 6305695 2.1423516 43.578964 30-34
TCTAT 3749655 2.1334474 21.575281 110-119
GGGGG 10255435 2.1243722 91.6488 5
CCTCT 5401100 2.1099503 48.24174 35-39
ATATC 3933575 2.1068468 15.244859 160-169
CTCAC 5723055 2.1046154 57.31415 20-24
GCAGA 6573120 2.1022491 24.758028 140-149
AATGA 4328330 2.0976217 28.281576 210-219
GGCCG 9351755 2.0967987 27.38594 230-239
AAATG 4323105 2.0950894 35.422142 200-209
AGCAC 6287805 2.09221 21.703838 130-139
AGAGT 5234725 2.082473 32.89352 150-159
TGGTA 4914910 2.0770466 31.820951 120-129
GGCTC 7065265 2.050022 21.212187 40-44
TTCAG 4637375 2.0389025 47.549072 45-49
GGATC 5991195 2.0355005 19.036423 70-79
TCCGC 6733315 2.0326028 41.535313 70-79
CATAT 3790115 2.0300086 16.029303 160-169
GCCTG 6966535 2.0213747 32.16424 210-219
ATGGA 5081090 2.021354 12.671375 100-109
TCCAT 4374830 2.0011468 28.53636 45-49
CAGAG 6255940 2.000807 32.916977 170-179
TCTCT 4109350 1.9968069 33.679478 35-39
GGTCT 5530430 1.996006 36.104084 15-19
GGTGG 7415980 1.9879777 19.195864 40-44
ACTAT 3693840 1.9784431 17.944162 130-139
ACCCT 5339375 1.96352 45.201675 10-14
TGAGC 5751875 1.9541919 19.420574 200-209
GCCAG 7154185 1.9540923 35.413216 70-79
GTCAC 5508290 1.9470097 39.93749 160-169
GCACA 5840020 1.9432133 19.189054 130-139
ACCAG 5830835 1.9401572 15.063078 190-199
TGGGA 5939735 1.9396852 17.112305 100-109
CCTGC 6418045 1.9374315 50.6353 20-24
GCTGT 5360815 1.9347898 21.587011 230-239
GATGG 5915030 1.9316177 21.352163 100-109
AACAG 4955655 1.9307897 36.366535 210-219
CAGAC 5749560 1.9131138 26.707407 140-149
TGTCT 4093720 1.9119983 52.495796 30-34
TGTGA 4506670 1.904524 21.38871 210-219
CAGTT 4324095 1.9011636 26.783922 190-199
CTATT 3328715 1.8939446 20.904099 110-119
TGGGG 7062200 1.893141 119.61077 4
CAAGG 5904990 1.8885643 17.840267 80-89
CCAGA 5662470 1.8841355 34.509438 170-179
TCAGC 5325315 1.8823338 11.597486 45-49
TACAA 3705445 1.8682746 19.519073 130-139
AGTCA 4482280 1.8551459 30.971758 160-169
TAGTG 4385705 1.853404 27.037949 120-129
TTCCA 4033875 1.8451862 23.890789 180-189
ATACT 3440080 1.842528 27.298765 130-139
CTGTA 4188920 1.8417314 25.390665 190-199
AGAGA 4907845 1.8379394 28.820225 170-179
AGCTA 4424280 1.8311406 26.718567 50-59
CACAG 5473960 1.8214103 16.579308 140-149
ACCTG 5138275 1.8162211 31.940136 25-29
CCGTG 6198830 1.7986215 22.433279 230-239
ATGCA 4338365 1.7955816 17.356049 60-69
ATTGG 4203895 1.7765709 22.289507 100-109
CATGA 4287085 1.7743577 23.334356 60-69
TAGTA 3446170 1.7741432 17.023678 120-129
AGTTC 4033550 1.7734203 23.96428 190-199
GTGCA 5201295 1.7671331 50.247364 25-29
CTCAG 4980795 1.7605566 78.50086 6
CCTGG 6042940 1.7533891 32.463306 2
GCTGA 5143750 1.7475822 29.192581 200-209
GGAGC 6647825 1.7453035 13.779475 200-209
TTCTG 3710270 1.7329055 43.68293 30-34
GGATG 5298440 1.7302635 22.659632 100-109
GCACT 4778375 1.6890074 27.361794 25-29
GCCGA 6173210 1.686149 20.50102 220-229
CAGCT 4727720 1.6711026 13.262627 50-59
GCAAA 4280410 1.6677052 34.10299 200-209
TGACC 4685905 1.6563221 15.824092 210-219
AGTTA 3208860 1.6519722 16.990828 50-59
CTGAA 3970720 1.643419 25.497675 200-209
AGGAC 5098710 1.6306957 22.51734 220-229
TCTCA 3564360 1.6304194 26.70093 100-109
CGATT 3694405 1.6243092 35.78625 160-169
AGGGG 6428495 1.6222101 32.660015 90-99
AACAC 3989455 1.6171154 23.70664 190-199
GGGCC 7171235 1.6078945 28.1773 2
GGCTT 4445845 1.6045648 21.866388 25-29
CATCA 3717835 1.6008946 33.930763 45-49
GGGGC 7427290 1.600665 28.241209 90-99
CGTCC 5286470 1.5958401 20.535261 180-189
AGTGA 3963585 1.5767894 87.92521 9
GTTAC 3576270 1.5723691 17.285618 50-59
ACAAT 3113450 1.5697924 24.292404 180-189
GAGGA 5104425 1.5691553 29.478868 220-229
CTCCC 4962755 1.5586189 14.832669 190-199
CCATG 4394310 1.5532525 16.239674 160-169
GTTCT 3315840 1.5486844 25.087318 190-199
CTTTA 2679380 1.5244913 42.309437 45-49
TTCTC 3133815 1.5227768 23.743153 190-199
CTGGT 4209090 1.5191168 33.11485 35-39
GTCCG 5235215 1.5190237 33.659775 70-79
GAGCA 4727140 1.5118582 8.16964 200-209
TTAGT 2761520 1.5102378 25.692242 110-119
TCTGC 4016890 1.5082954 34.813282 200-209
CTCAA 3473165 1.4955399 19.750027 150-159
CAACC 4293800 1.4864199 16.230251 140-149
TAGCA 3574020 1.4792311 12.36033 130-139
GGCAG 5614395 1.4739892 14.007991 150-159
AACCC 4229745 1.4642456 21.621078 140-149
GTCCA 4126940 1.4587454 31.226624 180-189
TACGC 4123045 1.4573687 24.61015 140-149
TCTGA 3304210 1.4527533 23.78138 220-229
ACTCC 3948620 1.4520789 17.169598 140-149
CAACT 3359495 1.4465938 19.287148 130-139
AAGAG 3822310 1.4314172 21.019787 150-159
ATCTA 2641540 1.4148251 22.280842 110-119
GCCGT 4859500 1.4100081 32.623672 230-239
AAGCT 3367795 1.3938779 18.736992 200-209
TGTCC 3701225 1.3897669 56.2736 15-19
TCAAG 3354520 1.3883835 25.058323 150-159
CTACG 3915930 1.3841598 16.426872 130-139
GGGGT 5161545 1.3836386 114.41661 7
TTACA 2580965 1.3823806 10.758046 120-129
GTGGC 4953875 1.3815975 14.999859 40-44
ACAGT 3332425 1.3792387 13.508708 120-129
CACGT 3897990 1.3778187 17.999445 180-189
TGGAA 3457180 1.3753319 20.317875 120-129
GGCCT 4736670 1.3743684 68.745285 3
AGCAG 4290880 1.3723315 13.018161 50-59
CCATA 3173425 1.3664725 16.339132 160-169
ATACA 2698955 1.3608054 23.117353 35-39
GTGAC 3997815 1.3582523 17.028734 210-219
ATCCG 3836660 1.3561405 25.285408 70-79
GATTG 3194980 1.3502022 25.504831 100-109
GAACT 3228535 1.3362403 15.295261 190-199
CAATT 2488525 1.3328692 25.491999 180-189
CCTTT 2733585 1.328298 48.321663 45-49
AGACC 3968235 1.320394 106.04518 9
ACAGA 3381715 1.3175615 21.057652 140-149
CGACA 3942435 1.3118093 16.790525 70-79
AACCA 3230590 1.3095114 18.959276 190-199
CCAGT 3703515 1.3090779 20.495842 190-199
AATTC 2424330 1.2984858 25.470991 180-189
ACATA 2562255 1.2918816 21.532862 130-139
GTGCG 4625555 1.2900316 19.783539 240-247
CGGCC 5516430 1.2868124 34.193558 230-239
ACGTC 3634205 1.2845789 19.924818 180-189
TCCGT 3410205 1.2804923 13.883034 150-159
ACATG 3086670 1.2775246 14.993237 190-199
AGTCG 3759630 1.2773293 17.471401 150-159
TGCGA 3757130 1.27648 16.851688 240-247
GATCC 3607100 1.2749982 25.078468 70-79
ATCAT 2374060 1.271561 16.654913 110-119
TCGGA 3739480 1.2704834 99.32979 5
TCACT 2760520 1.2627246 13.514689 190-199
CTTCT 2593610 1.2602817 23.886055 30-34
CTTCG 3335670 1.2525052 110.31633 3
TGGAC 3644905 1.2383516 16.43912 80-89
TACCA 2866480 1.2343023 11.008343 45-49
CCTAC 3336225 1.2268746 17.563211 190-199
GTCGA 3600710 1.2233365 13.591972 150-159
TGAGT 2892595 1.222414 21.553095 90-99
CGTGT 3374550 1.2179202 26.945303 230-239
GAAGT 3058000 1.2165306 14.308599 140-149
GAGAG 3917300 1.2042202 28.389774 220-229
ATTAG 2332835 1.2009805 25.472334 110-119
TTGGG 3450000 1.1968191 16.325872 100-109
AAGGC 3737610 1.1953816 29.9899 25-29
GGACT 3514205 1.1939465 13.980532 90-99
TTCGG 3307895 1.1938635 106.259636 4
ACGCA 3584535 1.1927215 21.369179 140-149
GCAAG 3718185 1.189169 17.527779 25-29
TCGAG 3473105 1.1799828 13.296691 150-159
GGGTG 4383505 1.175072 14.677508 60-69
AGGTC 3448880 1.1717525 18.618088 10-14
GCCCC 4814200 1.168355 12.545701 80-89
ATTAT 1743585 1.1616132 9.631951 50-59
AGAGC 3625975 1.159678 27.34601 220-229
AGGCC 4193455 1.1453992 14.435417 2
ATCAA 2270655 1.1448576 13.791371 110-119
GCTTC 3044935 1.1433376 28.926016 2
ACACA 2813985 1.1406416 7.7822127 130-139
TAGAC 2754355 1.1399846 19.231321 170-179
ACAAG 2925555 1.1398355 18.386745 80-89
GACCC 4009145 1.1392794 44.42704 10-14
CTTGA 2580735 1.134665 22.874767 90-99
ATTCC 2479285 1.1340814 23.41223 180-189
GCACC 3989835 1.1337919 11.660801 130-139
CCCCT 3598675 1.1302117 10.305155 140-149
CGCTG 3877145 1.1249729 12.924578 190-199
TTGAG 2658535 1.1234999 21.322964 90-99
GAACC 3374635 1.122879 11.629485 180-189
AGCTC 3171040 1.1208644 13.629789 210-219
TGTGT 2493370 1.1193414 16.079992 230-239
ATATT 1670380 1.1128424 28.913107 240-247
CCGAT 3145950 1.1119959 23.943064 160-169
TACAG 2682795 1.110367 9.921618 120-129
TGGCT 3068705 1.1075367 33.163784 40-44
CGGCT 3805365 1.1041456 23.08201 230-239
GAAGC 3442795 1.1010925 14.630884 200-209
ATGGG 3370745 1.1007537 20.088959 100-109
GATCT 2489825 1.0946949 10.657531 220-229
GGAGA 3558870 1.094035 89.6631 7
CTATA 2040995 1.0931693 13.932368 50-59
CAGCA 3277075 1.0904169 12.800631 45-49
ATGGT 2564465 1.0837458 10.18653 35-39
TAGTT 1970725 1.0777627 15.663405 50-59
CGCAG 3934100 1.0745591 16.575546 140-149
CACAT 2482955 1.069157 14.183432 130-139
GTATA 2069640 1.0654836 11.209668 240-247
TTATT 1501675 1.0627706 18.45464 240-247
GTAGA 2666625 1.060834 18.880028 170-179
AGATC 2562670 1.0606492 13.637587 210-219
GTAGC 3121240 1.0604372 11.385221 50-59
ACCAA 2601480 1.0545033 18.644764 130-139
ATGAG 2631720 1.0469482 20.30868 60-69
GGGAG 4147405 1.0465844 15.05778 5
AAGGT 2626645 1.0449293 21.481989 15-19
CTCCG 3451450 1.0418979 9.777926 140-149
CGAGT 3044150 1.0342458 15.877538 160-169
AAACT 2048715 1.0329561 17.946964 130-139
GACAG 3223970 1.0311068 16.183558 70-79
CGTGA 3023830 1.0273422 20.870316 150-159
CCAAC 2952595 1.022124 15.362024 130-139
TTTCA 1782815 1.0143713 7.008409 100-109
ATGAT 1958865 1.0084548 9.602549 120-129
TTATA 1512960 1.0079659 14.069596 110-119
TTTAG 1836550 1.0043842 30.112228 45-49
GATAC 2397295 0.99220306 24.892784 35-39
GGGAC 3778465 0.99198884 10.683104 90-99
ACACC 2856985 0.98902595 13.476876 40-44
GCTCT 2626350 0.98616385 19.34707 210-219
AGCCC 3442760 0.9783296 11.890235 80-89
TATGG 2309945 0.97618544 13.156991 35-39
AATCA 1930205 0.97320366 15.1659775 110-119
CAGAA 2497470 0.9730479 19.149643 140-149
ATGAC 2350095 0.97266763 11.398157 160-169
GGTAT 2300600 0.9722362 9.76513 110-119
ACTCA 2229280 0.9599249 12.538131 190-199
ACAGG 2991200 0.956661 15.716645 70-79
GCAGT 2815430 0.9565385 6.400833 50-59
GCCAA 2874075 0.95632225 14.964548 180-189
CATAC 2216830 0.9545639 14.41773 130-139
TCATA 1775695 0.95107305 9.129586 110-119
CCCAG 3346040 0.9508447 15.603091 80-89
CCGTC 3148715 0.9505106 10.457893 140-149
CCCCA 3207460 0.94827276 17.695724 80-89
TGGTT 2111645 0.9479747 9.7596 50-59
AAGTT 1839690 0.9471016 18.546978 140-149
AACTC 2187720 0.9420292 16.835047 190-199
TAACA 1855245 0.9354092 8.747656 120-129
TACAC 2162525 0.93118024 22.561796 35-39
GCCAT 2620285 0.9261895 7.81003 60-69
GACTG 2693655 0.9151657 13.611905 90-99
CGGAG 3463690 0.9093485 76.690506 6
AACTG 2190405 0.9065744 11.355487 60-69
GAGCC 3303080 0.9022024 19.439943 220-229
TCCTT 1856420 0.9020678 11.455443 1
ACCGC 3169280 0.9006148 11.933909 220-229
AGAAG 2396690 0.8975368 16.79063 140-149
TGAGG 2744750 0.89632815 13.003674 220-229
GTTAT 1637170 0.8953459 11.286353 110-119
GGTAG 2736365 0.8935899 12.363923 120-129
GATCA 2138735 0.8851891 9.71122 110-119
ATAGT 1716475 0.88366866 16.289738 120-129
AGCCG 3159970 0.86311346 20.383226 220-229
TGGCA 2534175 0.8609826 5.9870987 100-109
ATATG 1669385 0.85942596 6.332009 50-59
GCTTG 2373730 0.85671085 17.37736 90-99
CGGAC 3126170 0.85388124 11.721887 220-229
CGAGG 3232835 0.84874034 15.54893 220-229
ATCCA 1957620 0.84294844 9.999352 180-189
CTATC 1841410 0.84230286 8.240187 110-119
GGTGC 3016675 0.84132737 11.733215 60-69
GATGA 2114440 0.84116435 6.5521674 60-69
TTACC 1831560 0.8377972 9.846174 45-49
ACGCT 2357780 0.8334022 16.07154 190-199
GAGAT 2092185 0.832311 12.855542 210-219
GGTTC 2289055 0.8261504 11.302544 160-169
TCTTC 1698265 0.82521737 48.16394 2
TCATC 1798105 0.82249415 10.494792 110-119
GTCTA 1865225 0.82007855 10.536227 30-34
GCCTA 2312965 0.8175614 17.023785 190-199
CATGG 2394970 0.81368786 9.293561 200-209
CCGAG 2963480 0.8094442 18.996387 220-229
CGTAT 1838290 0.8082361 8.178198 240-247
AGTCT 1832580 0.8057257 15.692742 8
AAAAA 1448045 0.8047574 5.91338 190-199
ACATC 1856850 0.79955703 6.3020515 110-119
TGATG 1881750 0.79522973 12.121814 120-129
GGTTA 1879885 0.7944416 8.745113 50-59
CCTCC 2514375 0.78967273 11.271762 140-149
TTATG 1434585 0.78455496 11.046293 50-59
ACAAA 1644695 0.7806216 13.249337 130-139
GTCTG 2155670 0.7780101 13.630872 1
TATAC 1449425 0.7763209 8.790365 130-139
CATTA 1445315 0.77411956 12.110418 110-119
CCAGC 2718640 0.77255636 6.3383512 80-89
ATATA 1218760 0.76434857 10.598874 130-139
TTTAT 1073415 0.759681 9.517601 240-247
TTGGA 1796775 0.7593192 6.5155873 60-69
TCAAC 1760750 0.7581765 8.24944 110-119
GTTCA 1708970 0.75137836 13.8301 160-169
GGGAT 2298580 0.75062644 13.353907 100-109
TCCGG 2573430 0.74669355 12.48472 70-79
CATCC 2008795 0.7387211 6.779736 110-119
ATGCC 2086890 0.7376509 8.148365 50-59
GGATA 1837800 0.7311117 16.043434 35-39
TGCCA 2054450 0.72618437 7.4976997 60-69
ATAAA 1216210 0.7180202 8.536484 130-139
ATCTT 1256595 0.714967 13.490544 3
TATTT 1004455 0.7108764 9.0484295 240-247
GATTA 1377495 0.70915633 5.9566035 50-59
GGGCA 2693840 0.707234 13.982029 150-159
AACGC 2119025 0.70508623 14.84951 180-189
CCCCC 2773065 0.7001713 13.672473 80-89
CAAAC 1718410 0.6965531 14.304737 130-139
GAAAT 1434715 0.6953004 7.8533983 110-119
CACAA 1701500 0.6896987 8.723429 130-139
TATAG 1334775 0.6871634 6.216871 120-129
GACCA 2060180 0.68550617 6.5755587 170-179
CAACG 2051890 0.68274766 15.107147 180-189
AGGCA 2129905 0.68119717 6.831003 80-89
TTTAC 1194320 0.67953426 13.342732 45-49
AATAC 1345415 0.67835426 11.6410475 130-139
GCGAC 2449960 0.6691814 7.3572874 70-79
ACGCC 2338995 0.66467255 13.059396 180-189
GCGGA 2507355 0.6582747 9.869506 220-229
CTGAC 1860150 0.65750533 10.254514 220-229
GACCG 2388220 0.6523178 10.450918 210-219
TCAAT 1216830 0.65174156 9.073408 110-119
TATTG 1183830 0.64742047 5.928868 240-247
CCCGT 2140945 0.6462925 10.203164 140-149
AAATA 1092965 0.6452594 12.90336 130-139
ACTTC 1391980 0.6367234 30.389185 4
AATAA 1072550 0.63320684 7.8800793 130-139
CAGTC 1789295 0.63246036 5.724599 210-219
CGCCG 2697415 0.62922347 11.837707 220-229
CCCTA 1691675 0.6221023 12.363158 110-119
AGTAA 1282130 0.62135375 5.2540755 50-59
TAGCT 1411510 0.62059486 12.621925 50-59
CCGGC 2649470 0.6180394 10.036419 70-79
CACGC 2153370 0.61192346 12.955273 190-199
TCCAC 1659230 0.6101708 10.631471 180-189
AAGCA 1563365 0.609108 6.173201 120-129
AGATG 1522760 0.60578287 5.6480894 120-129
GGCCC 2558450 0.59680724 10.463297 70-79
CACGA 1778525 0.59178805 9.139258 180-189
TTTCT 976990 0.5905082 9.779568 4
AATGG 1477440 0.58775365 6.71446 120-129
ACCTA 1363870 0.5872806 7.189675 130-139
TCAGG 1725345 0.58618367 5.81943 150-159
TGATT 1066830 0.5834348 6.374097 50-59
CGGCA 2131860 0.58229566 11.718024 70-79
CACCG 2030205 0.57692367 9.699688 45-49
TTAGC 1308135 0.5751443 9.606631 45-49
GTTCC 1529390 0.57426816 6.7005534 140-149
GCCGC 2442540 0.569769 12.9564905 220-229
GGTGA 1721415 0.56214684 6.168167 120-129
GACGA 1745600 0.5582868 10.314401 220-229
GCTAC 1578185 0.55783945 8.252626 50-59
GGGGA 2167760 0.5470273 9.145357 4
CTTTG 1170655 0.54676193 7.3023453 45-49
TAATA 870205 0.5457514 8.560279 130-139
GTCCT 1448980 0.54407513 6.6144867 45-49
CGGTT 1493160 0.5389014 11.221503 160-169
ACCCG 1895750 0.53871554 8.983224 140-149
AAATC 1068145 0.53855556 8.436036 110-119
AAGAT 1089095 0.5278039 5.746661 15-19
CCTAT 1153535 0.52765316 5.2302227 110-119
TACTT 925695 0.5266943 11.154238 1
CCGTA 1480370 0.52326494 7.1957555 230-239
GAAGA 1393435 0.52182764 6.4237347 15-19
AAGTA 1058425 0.5129404 5.1513386 120-129
ACCCC 1733900 0.5126206 9.667478 140-149
CTGCG 1761160 0.51100934 12.2323885 25-29
AGTTT 933380 0.5104528 5.336494 140-149
TTCAA 944740 0.5060085 5.3889914 200-209
GGGTA 1535650 0.50148326 5.6723742 100-109
GGAGG 1973380 0.49797615 6.012198 6
ATTAA 791255 0.49623767 6.2739735 110-119
ACGAC 1475415 0.49093094 9.673606 220-229
GTAAC 1183715 0.48992118 6.8226347 120-129
CCACG 1721045 0.4890696 7.923194 180-189
ATTTC 857375 0.4878221 5.8560266 240-247
TATGT 869290 0.4754029 6.4503603 140-149
GGGTT 1356050 0.47041926 5.3177032 100-109
ATGCT 1068830 0.46992967 7.3232646 50-59
ACATT 873745 0.46798316 5.9872513 110-119
TAAAT 745160 0.46732908 8.462598 130-139
TATCC 1014380 0.4640005 5.421591 110-119
TGGCC 1597715 0.46358496 14.375624 2
TGCTA 1052165 0.46260262 6.501576 50-59
CAATC 1070830 0.4610979 6.814637 110-119
CCGGT 1529395 0.4437616 8.703306 160-169
TGCGC 1500220 0.4352963 9.106488 25-29
GGTTT 969440 0.4352079 5.0557084 100-109
TTGGT 957255 0.42973772 5.175608 120-129
GGTCA 1263630 0.4293166 5.5842595 160-169
CATAA 851305 0.4292255 5.822341 110-119
AACAT 844040 0.4255625 5.707751 110-119
GCGCT 1465035 0.42508718 8.310929 25-29
CTAAC 971255 0.41822106 5.7174683 110-119
TGACG 1227740 0.41712305 9.327106 220-229
GCATG 1227115 0.41691065 8.269459 60-69
CGCGG 1859335 0.41688976 6.8841085 220-229
ATTCT 727915 0.41416302 8.139002 2
CCTAA 930465 0.4006569 7.958446 110-119
ATGGC 1173790 0.3987936 6.895356 1
CATGC 1121705 0.39648798 7.1446333 60-69
GCCTT 1044970 0.39237407 8.820184 1
CACTT 850945 0.38924164 7.110262 3
ACGAG 1209940 0.38696927 8.146719 180-189
GGTAA 971785 0.38659453 7.147701 120-129
CAATG 932905 0.38611484 5.080135 120-129
AGCTT 867735 0.3815148 7.3923826 1
CCGCG 1633555 0.3810579 7.1711707 220-229
TTTGA 688955 0.3767801 6.217739 45-49
TACCT 781805 0.3576154 5.1755204 2
TGGGC 1215355 0.33895314 9.512072 1
GAGGC 1289270 0.33848175 5.968319 35-39
TTCTT 542605 0.32795903 19.922455 1
CGAGC 1185350 0.32376617 6.8015213 180-189
TGCTG 880880 0.31792137 14.042897 1
AACTT 558605 0.29919225 11.000694 3
CGCTT 770315 0.28924432 6.458813 1
AACCT 667340 0.28735566 5.4542365 2
GACTT 640735 0.2817103 6.970268 1
CTCTT 572555 0.27821475 9.538475 1
CTCGG 946475 0.27462444 5.1911473 6
TCACA 625485 0.26933295 5.7002625 7
GAGGT 794315 0.25939226 7.600393 7
GCGAG 977105 0.2565267 6.002656 240-247
TAACT 476050 0.2549753 8.041563 2
CCGCA 891200 0.25325245 5.094624 220-229
TTCCT 506980 0.24635068 6.1566997 4
TTGGC 679970 0.24541022 7.0804586 1
CCCTT 590090 0.23051985 5.9097686 3
GTCTT 490195 0.22894873 12.774535 1
TGTAA 432615 0.22271708 7.860925 25-29
TCGGT 613840 0.22154306 6.125583 7
AATCT 409660 0.21941637 7.5627046 2
CGGGG 1015635 0.21888082 8.8802395 3
ATTGT 400155 0.21883933 5.036205 240-247
TGCTT 466415 0.21784213 11.49507 1
CCTCG 707130 0.21346311 5.647168 5
TAGGC 462895 0.15726796 6.861749 1
TCGCA 441305 0.15598764 5.475667 7
TTGCT 220610 0.10303732 5.507204 4