FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s2_2_illumina12index_3_SL248349.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s2_2_illumina12index_3_SL248349.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 9200025
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 47104 0.5119986086994328 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 38126 0.4144119173589202 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35613 0.3870967741935484 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33355 0.362553362626732 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31886 0.3465860147119165 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29738 0.3232382520699672 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 29370 0.31923826293950286 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29153 0.31687957369681063 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 29086 0.3161513148062098 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 28777 0.31279262828090143 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27733 0.301444833030345 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27634 0.3003687489979647 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26806 0.29136877345441997 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26748 0.2907383403849446 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26460 0.28760791410892905 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25410 0.276194901644289 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25337 0.2754014255396045 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25073 0.2725318681199236 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24759 0.26911883391621216 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23466 0.25506452428118404 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23355 0.2538580058206364 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23296 0.2532167032154804 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22909 0.24901019290708448 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22771 0.24751019698316037 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22710 0.2468471553066432 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22450 0.2440210760296847 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22030 0.2394558710438287 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20539 0.22324939334403981 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20458 0.22236896095391046 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20336 0.22104287760087607 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20211 0.2196841856407999 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19927 0.21659723750750678 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19823 0.21546680579672337 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19649 0.21357550658829733 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19348 0.21030377634843386 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19209 0.20879291088882912 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18532 0.20143423523305642 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 18440 0.20043423795044038 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 18428 0.20030380352227306 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17981 0.19544512107304057 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17830 0.1938038211852685 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 17709 0.19248860736791476 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17607 0.19137991472849258 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 17521 0.19044513465996016 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 16877 0.1834451536816476 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 16711 0.18164081075866642 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 16443 0.17872777519626304 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16347 0.17768429977092454 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 16001 0.17392344042543362 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 15918 0.17302126896394301 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15871 0.1725104007869544 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 15440 0.16782563090861166 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15258 0.16584737541474073 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 15256 0.16582563634337952 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15017 0.1632278173157138 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14935 0.16233651538990385 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14847 0.1613799962500102 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13486 0.1465865581887006 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 13375 0.14538003972815292 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13317 0.14474960665867756 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13227 0.1437713484474227 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 12775 0.13885831831978718 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11947 0.12985834277624245 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11793 0.1281844342814286 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11545 0.12548878943263742 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11301 0.12283662272656867 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10660 0.11586925035529795 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 10659 0.11585838081961733 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 9887 0.10746709927418674 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 9791 0.10642362384884824 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 9466 0.10289102475265013 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 9359 0.10172798443482492 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9313 0.10122798579351687 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 19015855 8.23859 67.46907 35-39
TGGAT 14380760 7.738278 80.82772 35-39
TATTA 8333865 7.07199 145.53111 240-247
TCACC 14513145 6.820196 77.91696 160-169
TCTCC 12721005 6.3426886 86.722015 20-24
AGTGG 14792750 6.153706 40.87327 100-109
TCCCT 12192370 6.0791116 73.93803 15-19
CTGTG 12618630 5.8005056 87.52712 25-29
CTGAG 12781540 5.5375824 50.82411 15-19
TGTAT 7561275 5.2629857 67.325195 240-247
TGGGT 11760980 5.190964 46.530342 100-109
TTACT 7134445 5.171857 128.35368 240-247
TTCAC 8485030 4.952383 77.05941 40-44
CTCCA 10358040 4.867578 42.19529 80-89
CTCTG 10131040 4.850169 74.51335 35-39
CCTGA 10728615 4.840942 52.365395 15-19
ATTAC 7015590 4.7932925 121.79256 240-247
AAGGG 11789780 4.6225 40.62948 90-99
ATTCA 6761770 4.619874 116.35011 40-44
TCTGG 9873905 4.538816 137.04027 35-39
TGAGA 8843070 4.4848604 97.12425 15-19
ACACG 10495865 4.463626 55.99752 230-239
GAAGG 11365170 4.4560204 32.39395 150-159
GACAC 10332175 4.394012 52.43367 230-239
TGGAG 10528475 4.3797903 40.26074 90-99
CCAGG 12459545 4.34624 54.53702 80-89
TCAGT 7732255 4.3332906 99.673065 7
CCCTG 11202350 4.318038 86.52638 10-14
ACCAT 7830240 4.3074403 71.60232 160-169
ACTAC 7794925 4.2880135 38.000847 130-139
GAGAC 10499575 4.287381 92.90024 8
TACTG 7628675 4.275243 91.77202 240-247
TCCAG 9287000 4.1904597 41.548462 80-89
TACTA 6132850 4.1901736 30.328423 130-139
CAGCC 11514740 4.183259 56.876595 30-34
CACCA 9437495 4.1799917 60.720287 160-169
AGCCT 9229695 4.164602 52.63276 30-34
GGGTC 11660975 4.143944 127.861084 8
CACCT 8608725 4.0455184 45.324417 40-44
GACTC 8763205 3.9541135 52.594803 20-24
AGACT 7477310 3.9494846 71.25682 15-19
CTGGG 11097210 3.9436 134.64139 3
GATTC 6979330 3.9113386 60.10929 40-44
TGAAG 7686635 3.8983617 41.659 150-159
CAAGA 7737885 3.8521276 47.80933 180-189
ACTGG 8737285 3.7854152 45.811043 60-69
GCTGG 10561025 3.7530565 33.717873 90-99
ACTGT 6638255 3.720194 79.663124 240-247
CCTGT 7605250 3.6409636 61.340717 25-29
GTATT 5226405 3.637812 77.672676 240-247
ACTCT 6179330 3.6066353 69.28472 20-24
GAGTG 8631235 3.5905483 40.478203 90-99
GGATT 6516015 3.5062635 57.434074 40-44
GGACA 8556245 3.4938447 31.997986 220-229
TCCTG 7291120 3.490576 64.21697 20-24
CTCCT 6873110 3.4269304 94.01979 20-24
AGACA 6833040 3.4016714 41.214035 170-179
TATCT 4683005 3.394775 53.28675 200-209
GGTCC 9146845 3.3853178 142.36899 9
AGCTG 7736690 3.3519087 38.76786 60-69
GTCTC 6911360 3.3087683 34.62725 30-34
CTGCA 7295175 3.2917123 47.1449 25-29
CATCT 5589430 3.2623336 33.77553 170-179
CCATC 6899390 3.2422464 37.05144 45-49
GTCCC 8356125 3.220937 75.20994 10-14
CCTCA 6853020 3.2204556 84.21106 5
GGAGT 7636445 3.176721 38.68048 90-99
AGTAG 6208545 3.148732 30.477253 50-59
AGGGA 7908620 3.100787 42.391495 80-89
AAGAA 5275380 3.0742626 41.36437 180-189
GGAAG 7521640 2.949061 31.94603 80-89
GTGAA 5767575 2.9250891 40.62497 150-159
GAGCT 6747995 2.923558 31.379171 60-69
GGCTG 8192740 2.9114418 34.89327 90-99
CAGGG 8643640 2.8950698 37.593243 80-89
ACCTT 4954760 2.8919013 74.280235 40-44
GACAA 5772785 2.8738475 26.343182 180-189
CTATG 5089455 2.8522196 28.96231 50-59
TGTGC 6164430 2.8336523 58.21718 25-29
ATCTC 4808780 2.8066983 50.115574 170-179
GGGAA 7106855 2.7864335 35.499084 80-89
GAGTC 6250175 2.7078784 30.02447 150-159
ATCAG 5124430 2.7067027 29.194973 45-49
ATCTG 4819290 2.7008142 39.736385 200-209
GAACA 5328060 2.6524518 38.777225 210-219
CCCTC 6586025 2.6439295 27.354454 20-24
CAGTG 6092145 2.6394122 77.08758 8
CGCCA 7261640 2.6381252 40.39023 70-79
AGAAC 5294800 2.6358938 33.222126 190-199
AGGGC 7846405 2.6280468 34.000145 150-159
ATGAA 4204245 2.5995123 30.250412 210-219
TGCAA 4899790 2.588049 38.60139 200-209
AGGCT 5972745 2.5876822 21.236677 25-29
CTACA 4671085 2.569579 20.83054 190-199
CCAAG 6026925 2.5630987 41.76059 180-189
GTGGA 6090650 2.5336783 27.948336 100-109
CTACT 4300225 2.5098746 23.963388 50-59
CTGTC 5232615 2.5050802 50.544376 30-34
CACTG 5549190 2.503893 20.571589 30-34
GCAGC 7151230 2.4945505 34.99766 30-34
GTGTA 4607035 2.4790428 41.889164 230-239
TATAT 2887460 2.4502544 28.195412 240-247
TATGC 4362705 2.4449363 22.148563 50-59
GGGCT 6819035 2.4232707 43.134167 90-99
CTCTC 4859130 2.4227607 97.96228 20-24
CTTCA 4122580 2.4061902 51.466053 45-49
CAGTA 4481735 2.3672338 22.800755 45-49
TCCAA 4302770 2.3669677 46.2355 180-189
GTGGT 5361160 2.3662646 32.46173 120-129
TGGTG 5360760 2.366088 35.83412 35-39
CAGGC 6748230 2.3539724 34.1278 70-79
CACGG 6688825 2.3332503 49.68389 230-239
GCTCC 6043130 2.329374 34.325035 80-89
GCCTC 6028825 2.3238602 73.30412 4
CCGCC 7467730 2.3176105 34.237812 70-79
ACAAC 4452735 2.3086302 21.32817 180-189
GTATC 4080710 2.2869015 24.730192 200-209
GTAGT 4240975 2.2820663 26.595057 120-129
TCTGT 3831855 2.278439 27.187202 210-219
GCTAT 4055580 2.2728179 35.399895 50-59
TGAAC 4299330 2.2708886 41.586807 210-219
CAAAT 3497715 2.252358 38.25936 200-209
ACAGC 5287755 2.2487483 29.435944 210-219
TATCA 3282120 2.2424572 18.39432 170-179
TACAT 3277840 2.2395327 19.712856 190-199
CCTTC 4464630 2.2260633 55.481842 45-49
ACGGC 6331465 2.2085931 55.09565 230-239
AACTA 3415745 2.1995733 39.787018 130-139
GTGGG 6437260 2.1964984 30.291584 100-109
GGGGG 8309490 2.1919446 96.3213 5
TGCAG 4985880 2.1601248 44.308662 30-34
AAATG 3483340 2.153772 36.209843 200-209
GGCCG 7520970 2.151926 27.82828 230-239
CCTCT 4309575 2.1487527 49.23487 35-39
AATGA 3467560 2.1440153 28.73059 210-219
TGCAC 4729465 2.1340184 28.105076 25-29
GCAGA 5203200 2.1246672 25.432688 140-149
TCTAT 2930815 2.1245883 21.387897 110-119
TGGTA 3919535 2.1090994 32.644276 120-129
CTCAC 4470955 2.1010463 56.46246 20-24
AGCAC 4931655 2.0973077 22.114153 130-139
ATATC 3056700 2.0884423 15.109427 160-169
GGCTC 5599760 2.0725143 21.103844 40-44
CAGAG 5056290 2.064678 34.18511 170-179
GCCTG 5557220 2.05677 32.90998 210-219
AGAGT 4031255 2.0444953 32.818405 150-159
TCCGC 5282275 2.0360966 42.398914 70-79
TTCAG 3632070 2.0354757 48.25496 45-49
ATGGA 4002345 2.0298333 12.842457 100-109
CATAT 2970765 2.0297287 15.896335 160-169
GGTCT 4398025 2.0216749 36.37853 15-19
GGATC 4623325 2.0030482 18.709553 70-79
TCTCT 3202390 1.9831324 33.681458 35-39
TCCAT 3381940 1.9739072 28.1798 45-49
ACTAT 2883000 1.9697646 17.979404 130-139
GCTGT 4283100 1.9688464 21.894875 230-239
TGAGC 4537370 1.9658089 19.222494 200-209
GCACA 4620705 1.965069 19.662174 130-139
GCCAG 5627495 1.9630288 36.02384 70-79
AACAG 3927220 1.9550757 37.13832 210-219
GTCAC 4311590 1.9454658 39.986397 160-169
GATGG 4671960 1.9435108 21.446661 100-109
TGGGG 5662275 1.9320608 125.48253 4
CAGAC 4535585 1.9288692 27.491457 140-149
GGTGG 5652510 1.9287287 18.912462 40-44
CCAGA 4527325 1.9253567 35.825943 170-179
TGGGA 4627885 1.9251758 17.222965 100-109
ACCAG 4517140 1.9210253 15.022945 190-199
ACCCT 4079885 1.9172698 44.68307 10-14
CTATT 2642275 1.9154214 21.369593 110-119
CCTGC 4962845 1.9129697 50.677364 20-24
TGTGA 3545155 1.9076458 21.087982 210-219
AGAGA 3963230 1.8944298 29.993029 170-179
TCAGC 4197540 1.8940045 11.725722 45-49
TAGTG 3508535 1.8879406 27.513445 120-129
CTGTA 3360395 1.8832242 26.04132 190-199
CAGTT 3358945 1.8824115 26.868488 190-199
ATACT 2754720 1.8821192 28.149399 130-139
AGTCA 3548145 1.8741155 31.130388 160-169
TGTCT 3143685 1.8692499 51.957653 30-34
TAGTA 2845640 1.8668115 17.888391 120-129
TTCCA 3191575 1.8627986 24.064146 180-189
TACAA 2888245 1.859889 19.433598 130-139
CAAGG 4554370 1.8597249 17.804295 80-89
AGCTA 3511820 1.8549287 27.22917 50-59
CACAG 4328255 1.8406973 16.693632 140-149
CCGTG 4938890 1.8279214 22.569664 230-239
CATGA 3452530 1.8236121 24.472237 60-69
ACCTG 3965405 1.789261 31.346457 25-29
AGTTC 3179015 1.7815756 23.964314 190-199
GTGCA 4095455 1.7743496 51.534184 25-29
ATTGG 3283020 1.7665912 22.095997 100-109
CTCAG 3912865 1.7655543 80.4902 6
GGATG 4220110 1.7555436 22.886076 100-109
ATGCA 3322575 1.7549704 16.710676 60-69
TTCTG 2930175 1.7422959 43.63735 30-34
CCTGG 4694830 1.7375932 34.520645 2
GCCGA 4973020 1.7347295 21.41842 220-229
GGAGC 5168230 1.7310284 13.929695 200-209
GCTGA 3987935 1.7277668 29.146605 200-209
GCAAA 3450655 1.717829 35.069656 200-209
CAGCT 3769590 1.7009058 13.618793 50-59
AGGAC 4141825 1.6912668 23.171444 220-229
AACAC 3230545 1.6749556 24.464165 190-199
TGACC 3679650 1.6603233 15.650304 210-219
AGGGG 5148420 1.6557211 33.493137 90-99
AGTTA 2517570 1.6515892 17.266624 50-59
TCTCA 2829280 1.6513411 27.534 100-109
CGATT 2937705 1.6463413 36.270077 160-169
GCACT 3645120 1.644743 27.140333 25-29
GAGGA 4158710 1.6305339 30.276962 220-229
CTGAA 3086505 1.6302792 25.309818 200-209
GGGGC 5934105 1.6302701 28.97303 90-99
GGGCC 5631330 1.6112556 29.134134 2
AGTGA 3152915 1.5990355 89.83594 9
ACAAT 2482165 1.5983933 25.05031 180-189
GGCTT 3466070 1.5932757 22.259449 25-29
TTAGT 2263530 1.5755183 26.808598 110-119
CGTCC 4070430 1.5689807 20.250498 180-189
CCATG 3475560 1.5682343 16.380936 160-169
CTTTA 2160240 1.5659878 43.846878 45-49
GTTAC 2791735 1.5645372 16.9563 50-59
CATCA 2826490 1.5548613 33.671078 45-49
GTCCG 4188575 1.5502241 34.498413 70-79
CTCCC 3856920 1.5483428 14.785881 190-199
TCTGC 3229155 1.5459368 35.764027 200-209
GTTCT 2594820 1.5428922 25.085098 190-199
TAGCA 2884030 1.5233327 12.65323 130-139
GAGCA 3711240 1.5154424 8.1242695 200-209
TTCTC 2423225 1.5006217 23.780651 190-199
TACGC 3308360 1.4927907 25.716848 140-149
CTGGT 3240835 1.4897403 32.843437 35-39
CTCAA 2689760 1.4796456 19.679737 150-159
ACTCC 3131485 1.4715861 17.63616 140-149
CAACT 2656340 1.4612613 19.095484 130-139
TCTGA 2598770 1.4563962 23.858637 220-229
GGCAG 4318730 1.4465 14.066875 150-159
CAACC 3251235 1.4400151 16.200325 140-149
GTCCA 3174915 1.432578 30.6576 180-189
GGGGT 4185000 1.4279906 120.42128 7
AACCC 3221400 1.4268007 21.664371 140-149
GCCGT 3837270 1.4202033 32.89468 230-239
CTACG 3140295 1.416957 17.027102 130-139
ATCTA 2065275 1.4110668 22.19535 110-119
TTACA 2033775 1.3895448 10.413795 120-129
AAGCT 2622460 1.3851727 18.45148 200-209
CCATA 2505435 1.3782477 16.19096 160-169
TCAAG 2604940 1.3759186 24.959177 150-159
GAACT 2602705 1.3747382 15.856139 190-199
AGCAG 3349505 1.3677318 13.278433 50-59
CACGT 3029660 1.3670363 17.726206 180-189
CCTTT 2200175 1.3624943 49.731155 45-49
TGGAA 2683880 1.3611592 19.961132 120-129
TGTCC 2839325 1.3593082 55.351044 15-19
ATACA 2107560 1.3571659 22.937416 35-39
GTGGC 3812585 1.3548728 14.955192 40-44
CAATT 1979545 1.352493 25.955278 180-189
GTGAC 3118695 1.3511696 16.851368 210-219
GGCCT 3649500 1.350708 70.25309 3
ACAGT 2538620 1.3408887 13.143695 120-129
ACATA 2077960 1.338105 22.32436 130-139
AAGAG 2795135 1.3360786 20.561636 150-159
GATTG 2480665 1.3348442 25.38572 100-109
CGACA 3104445 1.3202419 16.962267 70-79
AATTC 1929290 1.3181571 25.866669 180-189
ACAGA 2647170 1.3178326 21.213614 140-149
CGGCC 4417110 1.3162576 34.54459 230-239
ATCCG 2895190 1.3063612 25.039185 70-79
CCAGT 2881025 1.2999696 20.50382 190-199
TCCGT 2714775 1.2996807 14.051742 150-159
GTGCG 3645115 1.2953594 19.797266 240-247
AGACC 3027290 1.2874298 104.75317 9
AACCA 2479585 1.285602 18.858212 190-199
TCACT 2201280 1.2848017 14.396741 190-199
ACATG 2429650 1.2833312 15.409287 190-199
TGCGA 2961960 1.2832646 16.843924 240-247
ACGTC 2807145 1.2666336 19.58386 180-189
AGTCG 2908145 1.2599492 17.274647 150-159
CTTCT 2029170 1.2565967 23.367807 30-34
TGGAC 2878165 1.2469604 16.455084 80-89
GATCC 2761680 1.246119 24.848122 70-79
TACCA 2263040 1.2449056 11.438359 45-49
ATTAG 1885655 1.2370373 26.66868 110-119
GAGAG 3154820 1.2369319 29.135624 220-229
CCTAC 2630325 1.2360748 18.021797 190-199
CTTCG 2581485 1.2358689 109.89536 3
TGAGT 2277185 1.225352 21.746632 90-99
ACGCA 2879555 1.2246019 22.23629 140-149
GTCGA 2811035 1.2178766 13.497015 150-159
TCGGA 2810015 1.2174346 98.784485 5
ATCAT 1769110 1.2087166 16.213186 110-119
CGTGT 2612100 1.2007247 27.043097 230-239
GAAGT 2367430 1.2006681 14.189295 140-149
GGACT 2765980 1.1983564 13.82827 90-99
ATTAT 1401110 1.1889606 9.61465 50-59
ACACA 2281710 1.1830088 7.888803 130-139
TTGGG 2671800 1.179257 16.196217 100-109
TTCGG 2554120 1.1740725 105.57343 4
GCAAG 2872310 1.1728749 17.299597 25-29
AAGGC 2871445 1.1725217 29.954605 25-29
TCGAG 2698480 1.1691123 13.095282 150-159
GGGTG 3400680 1.1603676 14.734264 60-69
ATATT 1364020 1.1574864 29.90406 240-247
AGAGC 2828775 1.1550978 27.924685 220-229
ATTCC 1972105 1.1510413 23.689829 180-189
GCTTC 2392630 1.145456 28.887947 2
TGTGT 1999500 1.1415648 16.378777 240-247
AGGTC 2629720 1.139322 18.494587 10-14
GCCCC 3664160 1.1371723 12.479714 80-89
TAGAC 2148095 1.1346151 19.03523 170-179
AGGCC 3245735 1.1322037 14.412808 2
CTTGA 2016570 1.1301211 22.983864 90-99
ACAAG 2268505 1.1293229 18.44651 80-89
CGGCT 3036125 1.1236933 23.599693 230-239
CCGAT 2489625 1.1233631 24.2708 160-169
TTGAG 2080160 1.1193328 21.470533 90-99
CCCCT 2787250 1.1189288 10.239658 140-149
CGCTG 3014855 1.1158211 13.20573 190-199
GCACC 3070045 1.1153352 11.609891 130-139
AGCTC 2471340 1.1151124 13.427259 210-219
ATCAA 1731445 1.1149663 13.209295 110-119
CACAT 2022405 1.1125315 14.772551 130-139
GAACC 2608380 1.109278 11.502558 180-189
GACCC 3043040 1.1055243 43.673447 10-14
ATGGG 2653265 1.1037444 20.287935 100-109
TAGTT 1580870 1.1003562 15.982555 50-59
CTATA 1607375 1.0982138 13.922534 50-59
TTATT 1219655 1.0981175 19.156296 240-247
CGCAG 3141525 1.0958524 17.26456 140-149
GAAGC 2671995 1.0910785 14.449833 200-209
ATGGT 2021745 1.0878999 10.065053 35-39
TGGCT 2361435 1.0854995 32.867474 40-44
GTATA 1650070 1.0824875 11.586709 240-247
ATGAG 2132275 1.0814068 20.96549 60-69
TACAG 2042905 1.079054 9.60965 120-129
GGAGA 2743075 1.0754962 89.01774 7
GTAGC 2477545 1.0733927 11.548304 50-59
GATCT 1891555 1.0600605 10.545561 220-229
CAGCA 2492160 1.0598526 12.929984 45-49
CTCCG 2736400 1.0547678 10.029647 140-149
TTTAG 1508145 1.0497364 31.741539 45-49
CGTGA 2406640 1.0426731 21.311861 150-159
AAACT 1615365 1.0402163 18.183674 130-139
GGGAG 3224985 1.0371484 13.839034 5
AAGGT 2042840 1.0360488 21.171112 15-19
GACAG 2520180 1.0290865 16.33475 70-79
ACCAA 1970230 1.0215143 18.615116 130-139
CGAGT 2348660 1.0175533 15.73865 160-169
GTAGA 2005570 1.017147 18.69703 170-179
TTTCA 1400725 1.0154048 7.5150433 100-109
CCAAC 2265110 1.0032473 15.23199 130-139
ACACC 2252780 0.9977861 13.367136 40-44
GCCAA 2340590 0.99539375 15.546539 180-189
TTATA 1169685 0.9925767 13.41857 110-119
ACTCA 1803260 0.9919791 13.418979 190-199
CATAC 1794355 0.98708045 15.052774 130-139
AGATC 1864465 0.9848027 13.698315 210-219
ATGAC 1855905 0.9802815 11.653894 160-169
GGGAC 2902105 0.9720207 10.608834 90-99
GCTCT 2028655 0.9712053 19.094223 210-219
GATAC 1838395 0.9710327 24.415758 35-39
AACTC 1764265 0.9705279 17.575186 190-199
TATGG 1792090 0.96432257 12.803877 35-39
AATCA 1496060 0.96338975 14.88409 110-119
CAGAA 1930515 0.96106225 19.199612 140-149
ATGAT 1461400 0.9587153 8.992594 120-129
AGCCC 2633475 0.95673096 11.939962 80-89
GGTAT 1776885 0.9561407 9.584578 110-119
ACAGG 2334955 0.95345217 15.886638 70-79
TCATA 1394995 0.95310843 9.185348 110-119
TAACA 1467565 0.94504035 9.159521 120-129
CCGTC 2447990 0.9435979 10.412064 140-149
GCCAT 2086635 0.94152683 8.000612 60-69
AAGTT 1428695 0.9372599 18.369783 140-149
GAGCC 2686065 0.93697506 20.274405 220-229
GCAGT 2157015 0.9345234 6.250073 50-59
TACAC 1690465 0.92993027 22.956142 35-39
AACTG 1759565 0.92939496 12.174294 60-69
TGGTT 1627825 0.92936623 9.549065 50-59
CCCAG 2536610 0.92154044 15.439006 80-89
GGTAG 2185740 0.90925634 12.630905 120-129
ACCGC 2495795 0.9067124 12.0740185 220-229
TGAGG 2175555 0.90501946 12.930718 220-229
CCCCA 2388420 0.9036923 17.546158 80-89
CGAGG 2686390 0.89976984 16.336052 220-229
CGGAG 2679600 0.8974956 76.205086 6
AGCCG 2566315 0.8952029 21.244987 220-229
AGAAG 1858115 0.8881817 16.85319 140-149
GTTAT 1275410 0.88774246 10.849966 110-119
GACTG 2048460 0.887492 13.493292 90-99
ATAGT 1352080 0.88699853 16.291075 120-129
GATCA 1661880 0.8777981 9.511354 110-119
TCCTT 1412645 0.8748035 10.698468 1
CGGAC 2455710 0.85662085 11.656766 220-229
CCGAG 2443640 0.8524105 19.922121 220-229
ATCCA 1547310 0.85118026 10.354133 180-189
GTTTC 1425820 0.8477993 5.146083 100-109
GCTTG 1839840 0.8457338 17.45006 90-99
GGTTC 1829370 0.8409209 11.915384 160-169
GATGA 1652595 0.8381317 6.7953553 60-69
CTATC 1433340 0.836585 8.269189 110-119
ACGCT 1851340 0.8353574 16.418116 190-199
GGTGC 2343260 0.8327208 11.884106 60-69
TGGCA 1919100 0.8314471 5.659738 100-109
GAGAT 1638495 0.8309808 13.11831 210-219
TTACC 1422120 0.8300363 9.978188 45-49
GCCTA 1838160 0.8294104 17.474482 190-199
TCTTC 1338290 0.82875794 48.1426 2
TCATC 1418270 0.8277892 10.586441 110-119
CATGG 1881605 0.8152025 9.184879 200-209
CGTAT 1446140 0.8104421 8.444683 240-247
ATATG 1233635 0.80929565 6.022 50-59
AGTCT 1441200 0.80767363 15.358835 8
GTCTA 1432390 0.80273646 10.489835 30-34
TATAC 1167200 0.79747117 9.285093 130-139
ACAAA 1308360 0.7940789 13.678644 130-139
TTATG 1139230 0.79295504 11.395755 50-59
ACATC 1441040 0.79272074 6.0682435 110-119
GTTCA 1397430 0.78314424 14.646817 160-169
ATATA 977595 0.78187525 11.183555 130-139
CCTCC 1938540 0.778218 11.093138 140-149
GGTTA 1444430 0.7772469 8.559768 50-59
GTCTG 1686650 0.77531576 14.221694 1
TGATG 1434515 0.7719117 11.992301 120-129
TTTAT 857165 0.7717493 10.147859 240-247
CATTA 1116530 0.7628516 12.716354 110-119
CCAGC 2095650 0.76134133 6.259185 80-89
GGGAT 1811645 0.7536348 13.578094 100-109
ATGCC 1651370 0.74512744 8.544645 50-59
TCAAC 1353750 0.7447022 7.865993 110-119
TATTT 818740 0.7371533 9.637839 240-247
TGCCA 1627535 0.7343726 7.6949286 60-69
TCCGG 1982835 0.73386264 12.174872 70-79
TTGGA 1357635 0.73054254 6.52026 60-69
AACGC 1692775 0.71989435 15.34386 180-189
CATCC 1529040 0.7185453 6.7884665 110-119
TATAG 1091310 0.71592695 6.544089 120-129
GGATA 1409715 0.71495247 15.688707 35-39
GAAAT 1148115 0.7098871 7.698672 110-119
ATCTT 978140 0.7090671 13.751362 3
GGGCA 2109070 0.70640427 14.060203 150-159
CAACG 1660925 0.7063494 15.634594 180-189
ATAAA 936960 0.70628977 7.968967 130-139
CAAAC 1349020 0.6994327 14.616926 130-139
GACCA 1620755 0.6892661 6.442758 170-179
TGACT 1228285 0.68835235 5.0150757 2
TTTAC 949510 0.6883128 13.543005 45-49
CCCCC 2129050 0.688156 13.735298 80-89
GATTA 1043535 0.68458515 5.6627774 160-169
CACAA 1317555 0.6831189 8.638738 130-139
ACGCC 1874480 0.6809911 13.56461 180-189
AATAC 1053945 0.67868924 11.606484 130-139
GCGAC 1915770 0.6682745 7.3456087 70-79
GACCG 1902690 0.6637118 10.28854 210-219
AGGCA 1619765 0.6614125 6.540587 80-89
GCGGA 1965650 0.65836775 9.803564 220-229
TATTG 943495 0.65671474 5.8823733 240-247
CTGAC 1444210 0.6516532 10.243169 220-229
TCAAT 934290 0.638339 8.836466 110-119
CCCGT 1651410 0.63654965 10.222105 140-149
AAATA 841070 0.6340069 12.866454 130-139
ACTTC 1077375 0.628822 30.077421 4
CAGTC 1382950 0.6240116 5.751028 210-219
TAGCT 1111755 0.62304693 12.761419 50-59
CACGC 1705010 0.61942333 13.2591 190-199
AGATG 1213460 0.61541957 5.9186707 120-129
CGCCG 2049360 0.6106902 11.723051 220-229
AAGCA 1224640 0.6096588 6.1958885 120-129
TCCAC 1296275 0.60916156 10.723841 180-189
TTAGC 1083225 0.6070582 10.29356 45-49
CCCTA 1291645 0.60698575 12.21074 110-119
TTTCT 782040 0.60149485 9.63875 4
CCGGC 2005870 0.5977306 9.7843 70-79
CACGA 1393190 0.59248847 9.262397 180-189
AATGG 1166110 0.5914055 6.8888154 120-129
AGTAA 955555 0.590826 5.14493 50-59
AATAA 778480 0.58682597 7.361708 130-139
GGCCC 1939140 0.5778456 10.391604 70-79
ACCTA 1049925 0.5775671 7.272531 130-139
GTTCC 1187055 0.5682948 6.8847194 140-149
GACGA 1388495 0.566976 10.37601 220-229
GCCGC 1901495 0.5666278 12.830583 220-229
CACCG 1558460 0.5661823 9.286336 45-49
CGGCA 1622235 0.56588125 11.377326 70-79
CGGTT 1220305 0.56094724 11.800115 160-169
TCAGG 1281805 0.55534005 5.4944563 150-159
TGATT 793190 0.5520958 6.0281973 50-59
GGTGA 1313635 0.54646516 6.346142 120-129
GCTAC 1205600 0.5439881 8.074544 50-59
TACTT 744590 0.5397635 12.205928 1
GGGGA 1657575 0.53307265 8.952669 4
TAATA 666175 0.5328032 8.043004 130-139
ACCCG 1454210 0.5283087 9.000203 140-149
CTTTG 887380 0.52764034 6.9359827 45-49
AAATC 819375 0.5276376 8.307798 110-119
CCTAT 900365 0.52550817 5.240538 110-119
GTCCT 1093395 0.5234557 6.4931984 45-49
CCGTA 1151585 0.5196156 7.420833 230-239
AAGAT 837440 0.51779467 5.7126217 15-19
TTCAA 743660 0.5080941 5.4543123 200-209
ACCCC 1324100 0.50099176 9.6693945 140-149
ACGAC 1176500 0.5003356 9.770856 220-229
CTGCG 1350440 0.49980828 11.908231 25-29
ACATT 730740 0.49926665 6.364656 110-119
CCACG 1367325 0.49674374 8.03499 180-189
ATTTC 684350 0.4960947 6.100614 240-247
GTAAC 932795 0.49269852 7.2639613 120-129
TATGT 703945 0.48997724 6.8454995 140-149
AGTTT 700245 0.48740187 5.1423287 140-149
GGGTA 1151310 0.4789389 5.6074553 100-109
TGGCC 1274195 0.47158942 14.839942 2
GGGTT 1058215 0.4670662 5.6107707 100-109
GAAGA 976695 0.46686167 6.2376056 15-19
TATCC 799165 0.46644163 5.4172297 110-119
AGTAT 703655 0.4616154 5.2437057 110-119
CAATC 837905 0.46093425 6.6394987 110-119
CCGGT 1241155 0.45936108 9.218106 160-169
ATGCT 812510 0.4553448 7.098836 50-59
ATTAA 569265 0.45529515 6.395152 110-119
CATAA 705750 0.4544686 6.260216 110-119
TGCTA 793710 0.444809 6.2969723 50-59
GGTTT 774565 0.4422186 5.4157047 100-109
CCATT 756805 0.44171774 5.111306 110-119
AACAT 679170 0.4373524 6.1030564 110-119
TAAAT 537380 0.42979366 7.9210753 130-139
TGACG 988230 0.42814913 9.307655 220-229
TGCGC 1140120 0.42196724 8.938065 25-29
GCATG 972410 0.42129514 8.499301 60-69
TTGGT 731845 0.4178287 5.23109 120-129
CGCGG 1459060 0.41747135 6.811892 220-229
CTGTT 700730 0.41665736 5.193729 240-247
GGTCA 960630 0.4161914 5.3569856 160-169
GCGCT 1119135 0.4142005 8.191246 25-29
CTAAC 738880 0.4064603 5.7574143 110-119
ATTCT 560660 0.40643016 7.2244706 2
ATGGC 915585 0.39667585 7.567858 1
GGTAA 772095 0.39157647 7.5677176 120-129
CCTAA 707830 0.38937956 7.8751216 110-119
ACGAG 950660 0.38819107 8.224446 180-189
CATGC 847135 0.38224232 6.8954544 60-69
CACTT 653880 0.3816444 7.0522904 3
AGCTT 680690 0.38147056 7.614047 1
CAATG 722025 0.38137063 5.1884985 120-129
GCCTT 792385 0.37934914 8.795617 1
CCGCG 1270520 0.3786031 7.08083 220-229
TTTGA 515725 0.3589677 5.9056897 45-49
TACCT 612960 0.357761 5.049954 2
CCGGG 1199395 0.34317508 5.0062685 80-89
GAGGC 1012050 0.33897242 5.9753504 35-39
TGGGC 920830 0.32723403 9.558745 1
TTCTT 425250 0.32707494 20.539085 1
CGAGC 927130 0.32340905 6.8813353 180-189
TGCTG 672935 0.30933335 13.927289 1
CGCTT 624650 0.2990471 5.9711723 1
ATGTG 539605 0.29036114 5.1568913 140-149
AACTT 413565 0.2825618 10.842614 3
CTCTT 452450 0.28018707 9.628042 1
GACTT 498010 0.2790935 6.985929 1
AACCT 504440 0.27749407 5.2471914 2
GCGAG 774660 0.25946185 6.119963 240-247
TCACA 456395 0.25106436 5.0318065 5
CCGCA 685550 0.24905762 5.037306 220-229
TTGGC 532170 0.24462679 7.007698 1
CTCGG 659035 0.24391398 5.104363 6
GAGGT 585820 0.24369805 6.323962 7
TTCCT 384830 0.23831227 6.203851 4
TAACT 336090 0.22962822 6.932765 2
GTCTT 379855 0.22586358 11.883949 1
CCCTT 449835 0.22428758 5.4784102 3
AATCT 323515 0.22103655 7.78091 2
TGTAA 332620 0.21820709 7.629746 25-29
ATTGT 310345 0.21601401 5.000705 240-247
CGGGG 765100 0.21019508 8.606726 3
TGCTT 346245 0.20587891 11.819321 1
CCTCG 529435 0.20407508 5.5933857 5
TCGGT 391580 0.18000068 6.027998 7
TGCCT 352040 0.16853684 5.1292386 4
TCGCA 334050 0.15072928 5.244914 7
TAGGC 342565 0.14841577 7.148097 1
TTGCT 171490 0.10196876 5.5117655 4