FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_11_SL248340.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_11_SL248340.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 11989916
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 57813 0.4821801920880847 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 43518 0.3629550031876787 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 43343 0.3614954433375513 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 42031 0.35055291463259625 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 40709 0.3395269825076339 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 38335 0.3197270105979058 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 38294 0.3193850565758759 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 38291 0.31936003554987374 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37589 0.31350511546536275 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 37321 0.31126990380916764 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35056 0.29237902917751885 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33956 0.2832046529767181 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 32130 0.26797518848338886 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31548 0.2631211094389652 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 31506 0.26277081507493466 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31404 0.26192010019086037 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 30866 0.2574329961944688 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 30358 0.253196102458099 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 29692 0.24764143468561417 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 29471 0.24579821910345329 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28307 0.23609006101460595 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 28087 0.2342551857744458 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27763 0.23155291496620994 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27421 0.22870051800196098 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27191 0.22678223934179353 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26988 0.2250891499156458 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 26166 0.21823338879104742 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25871 0.21577298790083269 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25801 0.21518916396078172 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25336 0.21131090493044322 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 25228 0.2104101479943646 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25082 0.20919245806225834 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 24419 0.2036628113157757 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24110 0.20108564563755074 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23581 0.19667360471916565 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 23440 0.19549761649706301 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23204 0.19352929578489123 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22354 0.18644000508427247 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22346 0.18637328234826664 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 21625 0.18035989576574182 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21064 0.17568096390333343 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 21018 0.17529730817129996 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20937 0.17462174046924098 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 20343 0.1696675773208086 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20323 0.169500770480794 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20195 0.16843320670470086 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 20001 0.16681518035655962 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 19789 0.1650470278524053 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19686 0.16418797262633034 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 19312 0.16106868471805807 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 18507 0.1543547094074721 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18385 0.15333718768338328 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17968 0.14985926506907973 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17919 0.14945058831104405 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 17133 0.14289507949847188 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 16804 0.1401511069802324 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16794 0.1400677035602251 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16344 0.13631454965989753 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16244 0.13548051545982473 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 16005 0.13348717372165075 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15508 0.12934202374728895 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 15416 0.12857471228322198 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14774 0.12322021271875466 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14705 0.12264472912070443 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14591 0.12169393013262145 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13612 0.11352873531390878 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 13481 0.11243615051181344 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 13223 0.11028434227562563 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12613 0.10519673365518158 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 12437 0.10372883346305346 No Hit
ATGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 12092 0.10085141547280232 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 12043 0.10044273871476664 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 24270345 8.170965 65.920906 35-39
TGGAT 18424655 7.6939535 78.634964 35-39
TATTA 10459785 6.862759 143.16452 240-247
TCACC 18552280 6.7805123 77.3744 160-169
TCTCC 16193440 6.2914658 84.99713 20-24
AGTGG 18777825 6.067487 40.505245 100-109
TCCCT 15569570 6.0490794 72.56638 15-19
CTGTG 15870885 5.6799707 84.81924 25-29
CTGAG 16187790 5.449856 48.97882 15-19
TGGGT 14931260 5.128702 45.54223 100-109
TGTAT 9486840 5.119864 66.87069 240-247
TTACT 8964895 5.0409913 126.53822 240-247
TTCAC 10701525 4.8513613 73.803825 40-44
CTCTG 12878460 4.802228 72.54246 35-39
CTCCA 13064445 4.774811 40.65379 80-89
CCTGA 13576745 4.762412 50.463066 15-19
ATTAC 8825605 4.6683955 119.25486 240-247
TCTGG 12702830 4.5461674 134.08942 35-39
AAGGG 14955060 4.5457363 39.75751 90-99
ATTCA 8520720 4.507124 110.70645 40-44
GAAGG 14448175 4.3916636 31.61417 150-159
TGAGA 11119050 4.3678765 93.33853 15-19
ACACG 13189865 4.352353 55.356594 230-239
TGGAG 13437080 4.3417864 39.093678 90-99
GACAC 13119845 4.329248 52.156857 230-239
CCCTG 14330920 4.308242 84.43401 10-14
CCAGG 15866975 4.306642 52.89255 80-89
TCAGT 9848690 4.2851157 99.78551 7
ACCAT 9971280 4.252275 70.82265 160-169
ACTAC 9869630 4.2089267 37.43027 130-139
GAGAC 13269640 4.202513 91.05034 8
TACTG 9620460 4.1858134 90.805504 240-247
CACCA 12055570 4.144818 60.219555 160-169
CAGCC 14624030 4.1356673 54.557907 30-34
TACTA 7764990 4.1073723 29.296051 130-139
TCCAG 11709095 4.1072836 40.11945 80-89
AGCCT 11655040 4.0883217 50.533764 30-34
GGGTC 14669350 4.062274 123.03364 8
CACCT 11039555 4.0347514 45.27466 20-24
CTGGG 14166885 3.9231298 130.27747 3
GACTC 11087000 3.8890662 50.713966 20-24
TGAAG 9838025 3.8646538 40.60047 150-159
AGACT 9417800 3.8546598 68.461464 15-19
GATTC 8845360 3.848572 57.545017 40-44
ACTGG 11182800 3.7648528 44.835117 60-69
CAAGA 9771770 3.762377 46.794056 180-189
GCTGG 13422275 3.7169304 32.639008 90-99
CCTGT 9781085 3.6472523 60.085304 25-29
ACTGT 8347545 3.6319752 78.916595 240-247
GAGTG 11207735 3.621441 40.020164 90-99
GTATT 6570815 3.5461414 76.83866 240-247
ACTCT 7810325 3.5406833 66.786064 20-24
TCCTG 9399190 3.5048485 63.856396 20-24
GGACA 10949615 3.467758 31.701124 220-229
GGATT 8218255 3.4318619 55.070362 40-44
CTCCT 8821475 3.427314 92.44483 20-24
GGTCC 11616215 3.3516357 139.6229 9
TATCT 5933755 3.3365707 52.162994 200-209
AGACA 8610655 3.3153186 40.19679 170-179
GTCTC 8889715 3.3148713 34.15931 30-34
AGCTG 9785630 3.2944748 37.253284 60-69
CTGCA 9386900 3.2927103 47.096184 25-29
CCATC 8886845 3.247976 36.449005 45-49
CCTCA 8876020 3.2440197 84.23154 5
CATCT 7155535 3.2438447 33.449238 170-179
GTCCC 10677505 3.2099323 72.84729 10-14
GGAGT 9736755 3.1461382 37.46021 90-99
AGGGA 10207395 3.102637 40.638733 80-89
AGTAG 7770390 3.0524287 29.360395 50-59
AAGAA 6627660 2.977519 40.259563 180-189
GTGAA 7469580 2.9342618 40.787636 10-14
GGAAG 9639080 2.9298923 30.664207 80-89
CAGGG 11037655 2.8753293 36.172737 80-89
ATCTC 6336975 2.8727639 49.41063 170-179
GGCTG 10354745 2.8674622 33.775536 90-99
GAGCT 8499040 2.8613257 29.892298 60-69
ACCTT 6271005 2.8428574 72.62898 40-44
GACAA 7375185 2.8396313 25.670975 180-189
CTATG 6450085 2.8063998 27.83422 50-59
GGGAA 9208275 2.798945 34.29218 80-89
TGTGC 7753600 2.7749064 56.11366 25-29
GAGTC 8027500 2.702575 29.692339 150-159
ATCAG 6557600 2.6839936 28.31998 45-49
CCCTC 8538645 2.6745386 27.46709 20-24
ATCTG 6142640 2.6726317 38.887447 200-209
CAGTG 7885065 2.6546218 77.20928 8
AGGGC 10041355 2.6157916 33.873898 150-159
CGCCA 9228480 2.6098094 39.23483 70-79
GAACA 6665170 2.566258 37.775665 210-219
GTGTA 6140560 2.564237 41.469498 230-239
AGGCT 7610505 2.5621877 21.096268 25-29
CTACA 6000135 2.5587714 21.072557 190-199
TGCAA 6249895 2.5580516 37.432674 200-209
AGAAC 6628410 2.5521045 32.23656 190-199
GTGGA 7843640 2.5344353 27.905088 100-109
CCAAG 7656315 2.5264084 40.927258 180-189
ATGAA 5288075 2.5254536 29.509466 210-219
CTGTC 6730285 2.509645 49.53371 30-34
CACTG 7104300 2.492026 20.218279 30-34
CTACT 5489580 2.4886115 23.428802 50-59
GCAGC 9069815 2.4617455 33.481922 30-34
TATGC 5585845 2.4303732 21.48064 50-59
TATAT 3680505 2.4148123 27.074266 240-247
CTTCA 5308990 2.4067438 50.13977 45-49
CTCTC 6191440 2.4054945 94.82675 20-24
GGGCT 8673685 2.4019392 42.14177 90-99
TGGTG 6911740 2.3740969 34.770844 35-39
GTGGT 6855070 2.3546314 31.44205 120-129
CAGGC 8657110 2.3497279 33.57295 70-79
TCCAA 5493350 2.3426518 45.236347 180-189
CAGTA 5669035 2.3203084 21.93074 45-49
GTATC 5331380 2.3196566 24.217802 200-209
GCCTC 7713200 2.3187861 73.51238 4
TATCA 4368110 2.3105574 18.07514 170-179
CCGCC 9476275 2.2967353 33.243523 70-79
GCTCC 7636800 2.2958183 33.15767 80-89
CACGG 8422915 2.2861624 49.357937 230-239
ACAAC 5665955 2.2729824 20.898924 180-189
TCTGT 4862745 2.2491224 26.80509 210-219
CCTTC 5769725 2.24165 54.247845 45-49
ACAGC 6771620 2.2344797 28.525543 210-219
TGAAC 5456035 2.2331285 40.750755 210-219
TACAT 4197945 2.2205467 19.812311 190-199
GCTAT 5087560 2.213572 34.223026 50-59
GTAGT 5295970 2.2115445 25.320917 120-129
CAAAT 4393360 2.1861124 37.21334 200-209
AACTA 4357600 2.1683183 39.464367 130-139
GTGGG 8140030 2.163468 29.678581 100-109
ACGGC 7937135 2.1543112 54.48665 230-239
GGGGG 10450305 2.1491504 92.79276 5
TGCAC 6108865 2.1428504 27.625067 25-29
TGCAG 6356010 2.1398435 42.385365 30-34
CTCAC 5845355 2.1363683 56.747597 20-24
CCTCT 5467980 2.124416 47.38397 35-39
GCAGA 6702725 2.1227624 24.88174 140-149
TCTAT 3752180 2.1098638 21.218468 110-119
GGCCG 9437115 2.1069043 27.677101 230-239
AGAGT 5358520 2.1049778 32.550915 150-159
AATGA 4375810 2.0897787 27.886799 210-219
AAATG 4362550 2.083446 35.237957 200-209
AGCAC 6262865 2.0666018 21.470785 130-139
TGGTA 4922730 2.0556834 31.887533 120-129
ATATC 3869260 2.0466855 14.458811 160-169
GGCTC 7083580 2.0438309 20.797775 40-44
GCCTG 7070300 2.0399995 32.905712 210-219
GGATC 6032080 2.0307877 18.651543 70-79
TTCAG 4665620 2.029988 46.971565 45-49
CAGAG 6399065 2.0265925 33.2676 170-179
ATGGA 5157270 2.025921 12.769703 100-109
GGTCT 5641995 2.019192 36.836163 15-19
TCTCT 4187005 2.0177574 33.37102 35-39
TCCGC 6670995 2.0054722 41.109703 70-79
TCCAT 4373435 1.9826252 27.770397 45-49
CATAT 3746640 1.9818244 15.25111 160-169
ACCCT 5379660 1.9661653 44.886314 10-14
GGTGG 7369300 1.9586222 18.512074 40-44
GTCAC 5583290 1.9584907 40.36123 160-169
GATGG 6058510 1.9576244 21.795135 100-109
GCACA 5932355 1.9575415 19.275654 130-139
ACTAT 3697200 1.9556726 17.896679 130-139
GCCAG 7183860 1.949856 34.915173 70-79
CCTGC 6477330 1.9472514 50.806805 20-24
TGGGA 6019475 1.9450115 17.454767 100-109
CAGAC 5835910 1.9257164 26.946321 140-149
TGAGC 5711790 1.9229573 19.035488 200-209
AACAG 4991495 1.9218508 36.08729 210-219
ACCAG 5823945 1.9217684 14.904279 190-199
TCAGC 5441715 1.9088295 12.013432 45-49
TGGGG 7175930 1.907228 120.939995 4
GCTGT 5325135 1.9057922 21.48634 230-239
CCAGA 5758035 1.9000196 34.867218 170-179
CAAGG 5983035 1.8948354 17.834793 80-89
TGTCT 4083840 1.8888624 50.814426 30-34
TGTGA 4493210 1.87632 20.588915 210-219
CTATT 3319460 1.8665438 20.325174 110-119
AGTCA 4560030 1.8663981 31.07743 160-169
TTCCA 4109050 1.8627706 23.567738 180-189
CACAG 5640620 1.8612753 16.967342 140-149
CAGTT 4271550 1.8585299 26.325447 190-199
CTGTA 4261430 1.8541269 25.306145 190-199
AGAGA 4987615 1.8430965 29.11948 170-179
TACAA 3680615 1.8314543 18.760736 130-139
ATACT 3453210 1.8266114 27.221354 130-139
ACCTG 5199995 1.8240395 31.523169 25-29
TAGTG 4359000 1.8202752 26.541973 120-129
CCGTG 6258825 1.8058637 22.571281 230-239
TAGTA 3553500 1.8040378 17.152197 120-129
AGCTA 4388950 1.7963758 25.96489 50-59
CATGA 4331815 1.7729908 22.995884 60-69
CTCAG 5052260 1.7722175 80.55914 6
CCTGG 6133550 1.7697179 33.315655 2
TTCTG 3819740 1.7667105 43.79427 30-34
ATGCA 4313460 1.7654781 16.517574 60-69
AGTTC 4055240 1.7644147 23.40026 190-199
GGATG 5459465 1.7640612 23.193882 100-109
ATTGG 4182350 1.7465079 21.566143 100-109
GCTGA 5122025 1.7244043 29.108427 200-209
GTGCA 5117180 1.7227732 49.47515 25-29
GGAGC 6601870 1.7197993 14.265592 200-209
GCCGA 6212270 1.6861454 20.7268 220-229
CAGCT 4806315 1.6859455 13.0464525 50-59
GCAAA 4345290 1.6730458 33.913013 200-209
TGACC 4729855 1.6591251 15.46782 210-219
AGGAC 5233635 1.6574993 23.032106 220-229
TCTCA 3648850 1.6541464 26.546022 100-109
GCACT 4703490 1.649877 26.628473 25-29
CTGAA 4002395 1.6381608 24.867384 200-209
CGATT 3750795 1.6319522 36.123745 160-169
AACAC 4063440 1.6301095 23.674265 190-199
AGGGG 6501285 1.6254593 32.411938 90-99
GGCTT 4530075 1.6212512 22.075031 25-29
AGTTA 3182580 1.6157296 16.614693 50-59
GGGGC 7523555 1.6121104 28.145487 90-99
AGTGA 4091510 1.6072606 89.90434 9
GGGCC 7142500 1.594615 28.344004 2
GAGGA 5231280 1.5900985 29.818657 220-229
ACAAT 3158115 1.5714611 24.221422 180-189
CGTCC 5215620 1.5679494 20.187292 180-189
CATCA 3671135 1.5655639 32.936687 45-49
CCATG 4442395 1.5582907 16.54892 160-169
CTGGT 4326325 1.548332 32.254173 35-39
CTCCC 4934730 1.5456933 14.440116 190-199
GTTCT 3319450 1.5353159 24.482134 190-199
GTTAC 3524805 1.533625 16.231586 50-59
GTCCG 5296815 1.5282943 33.4837 70-79
GAGCA 4806415 1.5221982 8.268378 200-209
CTTTA 2706285 1.5217533 41.753735 45-49
TCTGC 4061235 1.5143872 35.054813 200-209
TTAGT 2783420 1.5021578 25.456108 110-119
TACGC 4266380 1.4965487 25.05243 140-149
TTCTC 3105335 1.4964904 23.110874 190-199
TCTGA 3426595 1.4908944 24.38869 220-229
GGCAG 5664110 1.4755111 14.439946 150-159
CTCAA 3445020 1.4691367 19.6487 150-159
ACTCC 3977860 1.4538336 17.359558 140-149
GCCGT 5006750 1.4446017 32.802082 230-239
TAGCA 3526445 1.4433568 11.948788 130-139
AAGAG 3901615 1.4417819 20.180466 150-159
AACCC 4172315 1.4344808 21.223372 140-149
GTCCA 4085660 1.4331564 30.76465 180-189
CAACT 3356085 1.43121 18.723682 130-139
CAACC 4135180 1.4217134 15.952832 140-149
CTACG 4028470 1.4130954 16.92537 130-139
ATCTA 2647010 1.4001635 21.997953 110-119
GGGGT 5266235 1.3996669 115.79178 7
GGCCT 4799710 1.3848642 70.49165 3
TTACA 2602375 1.3765535 10.174759 120-129
TGTCC 3691440 1.376495 55.177185 15-19
ATACA 2763520 1.3751128 22.612679 35-39
AAGCT 3340770 1.367361 18.093857 200-209
AGCAG 4303660 1.3629749 12.704487 50-59
TCAAG 3326040 1.361332 24.64407 150-159
GTGGC 4915620 1.361246 14.682692 40-44
TGGAA 3446705 1.353963 19.52952 120-129
CACGT 3854660 1.3521266 17.766283 180-189
ACAGT 3300075 1.3507047 13.151001 120-129
GTGAC 4007305 1.3491178 16.480518 210-219
CCATA 3160105 1.347634 15.61867 160-169
GAACT 3280285 1.3426048 15.271673 190-199
ACAGA 3485155 1.3418722 21.538342 140-149
CGACA 4062755 1.3406162 16.97589 70-79
AGACC 4008965 1.3228667 104.84314 9
CCTTT 2738845 1.3198754 46.803776 45-49
GATTG 3156250 1.3180188 24.880733 100-109
CAATT 2485755 1.314866 25.219467 180-189
GTGCG 4720385 1.307181 19.914948 240-247
ATCAT 2468765 1.305879 16.284512 110-119
ATCCG 3714690 1.3030283 24.489542 70-79
CGGCC 5563940 1.294261 34.503075 230-239
ACATA 2591825 1.2896782 21.347242 130-139
TCACT 2844665 1.2895824 13.777666 190-199
CCAGT 3674555 1.28895 20.188786 190-199
ACATG 3148265 1.2885695 15.489954 190-199
TCCGT 3454055 1.2879767 13.863439 150-159
CTTCT 2670830 1.2870983 23.705223 30-34
AATTC 2430690 1.285739 25.143875 180-189
TGCGA 3817875 1.2853432 16.825386 240-247
TCGGA 3794710 1.2775444 96.99048 5
AACCA 3169940 1.2716687 18.71738 190-199
CCTAC 3462415 1.2654481 18.325779 190-199
ACGTC 3593710 1.2605914 19.655876 180-189
TGGAC 3735365 1.2575651 16.541637 80-89
AGTCG 3732720 1.2566746 16.970078 150-159
CGTGT 3488790 1.2485898 27.06102 230-239
TGAGT 2984310 1.2462182 21.875742 90-99
GATCC 3552495 1.2461342 24.32273 70-79
CTTCG 3340045 1.2454638 108.184906 3
TACCA 2911625 1.241669 11.267571 45-49
ATTAT 1857830 1.218939 9.427068 50-59
AAGGC 3815910 1.208504 30.116417 25-29
GTCGA 3588695 1.2081864 13.17712 150-159
GAGAG 3962680 1.2044952 28.392115 220-229
GAAGT 3065740 1.2043092 14.53056 140-149
ACGCA 3629285 1.1975809 21.51232 140-149
GCAAG 3758845 1.1904314 17.678078 25-29
GGACT 3533420 1.1895775 13.651825 90-99
ACACA 2958205 1.186728 7.9430523 130-139
ATTAG 2335250 1.1855577 25.39534 110-119
TTCGG 3307640 1.1837587 103.84887 4
AGGTC 3505240 1.1800902 18.648064 10-14
GGGTG 4421610 1.1751814 14.853684 60-69
AGGCC 4323610 1.1735219 15.004015 2
TTGGG 3409070 1.1709732 15.7806425 100-109
TCGAG 3453910 1.1628093 12.848155 150-159
AGAGC 3668540 1.1618316 27.147377 220-229
GCTTC 3113835 1.1611128 28.102371 2
ACAAG 2997870 1.1542552 18.44413 80-89
GATCT 2652370 1.154033 10.7719555 220-229
CTTGA 2649910 1.1529626 23.198807 90-99
GCCCC 4725995 1.1454248 12.463396 80-89
TTGAG 2730995 1.1404365 21.58375 90-99
GACCC 4027730 1.1390398 44.09678 10-14
AGATC 2768355 1.1330742 13.791143 210-219
CCCCT 3615065 1.1323378 10.154923 140-149
ATATT 1720120 1.1285862 28.654305 240-247
ATTCC 2487650 1.1277355 23.103607 180-189
ATGGG 3470555 1.1214049 20.753483 100-109
GCACC 3952205 1.1176815 11.574604 130-139
CGCTG 3866600 1.1156332 12.8059225 190-199
GAACC 3380640 1.1155338 11.156611 180-189
TTATT 1594195 1.1118978 19.587074 240-247
TACAG 2714500 1.1110317 9.695065 120-129
TAGAC 2713520 1.1106305 18.52353 170-179
TGTGT 2495750 1.1078955 15.877632 240-247
CCGAT 3152795 1.1059284 23.97985 160-169
CGGCT 3832250 1.1057222 23.251595 230-239
ATCAA 2214200 1.1017741 13.000715 110-119
AGCTC 3136535 1.1002249 13.354531 210-219
TGGCT 3054755 1.0932547 32.315926 40-44
AAAAA 1996810 1.0906117 8.930203 90-99
CAGCA 3295130 1.0873173 13.104945 45-49
CACAT 2547780 1.0865066 14.011096 130-139
GGAGA 3574450 1.0864888 87.28209 7
CGCAG 3991935 1.0834981 16.685778 140-149
ATGGT 2594300 1.0833539 9.492613 120-129
CTATA 2044090 1.0812428 13.585427 50-59
TAGTT 1991215 1.0746201 15.37614 50-59
GAAGC 3363910 1.065355 14.16672 200-209
GTAGA 2711565 1.0651792 18.182928 170-179
AAGGT 2705275 1.0627084 21.633444 15-19
AAACT 2116970 1.0533929 18.287195 130-139
GTATA 2066460 1.0490986 10.923405 240-247
GGGAG 4189365 1.0474302 14.482421 5
CTCCG 3475465 1.0448139 9.971307 140-149
GACAG 3297060 1.0441833 16.332304 70-79
ATGAG 2642030 1.037864 19.779306 60-69
GTAGC 3074680 1.0351357 11.065381 50-59
CGTGA 3048655 1.0263741 21.009829 150-159
TTTCA 1807150 1.0161667 7.215688 100-109
CGAGT 3006045 1.012029 15.820285 160-169
ACCAA 2513440 1.0083039 18.18546 130-139
ACACC 2924265 1.0053896 13.279045 40-44
GATAC 2449910 1.0027362 24.323147 35-39
ACTCA 2343010 0.999182 12.908645 190-199
TTATA 1518950 0.99659675 13.394045 110-119
TTTAG 1836970 0.99137706 29.575373 45-49
GGGAC 3770630 0.98225605 10.453256 90-99
ATGAT 1932370 0.9810239 9.092636 120-129
ATGAC 2393045 0.9794616 11.654118 160-169
CCAAC 2843790 0.97772145 14.94859 130-139
CAGAA 2531160 0.97456014 19.47445 140-149
ACAGG 3074990 0.9738535 15.89773 70-79
GCCAA 2943805 0.9713883 15.2539 180-189
AGCCC 3396090 0.9604123 11.741545 80-89
TATGG 2297070 0.9592337 12.190438 35-39
GCAGT 2848930 0.959134 6.2490196 50-59
GGTAT 2296120 0.958837 9.4688015 110-119
GCTCT 2569990 0.95831937 18.784155 210-219
CCGTC 3183830 0.9571409 10.453618 140-149
AAGTT 1882140 0.9555232 18.793797 140-149
CATAC 2230805 0.9513319 14.320465 130-139
TAACA 1897940 0.9444048 9.135647 120-129
AACTC 2214325 0.94430393 17.037447 190-199
TACAC 2213295 0.9438647 22.573555 35-39
AATCA 1872170 0.9315818 14.253958 110-119
CCCAG 3278695 0.9272132 15.051534 80-89
TCATA 1752130 0.9268075 8.98746 110-119
GCCAT 2638255 0.92543966 7.5081377 60-69
AACTG 2257030 0.92379135 11.727608 60-69
TGGTT 2072910 0.92019135 9.102812 50-59
TGAGG 2816415 0.9100393 13.113395 220-229
GAGCC 3339020 0.9062827 19.672081 220-229
CCCCA 3073885 0.9057327 17.20033 80-89
CGGAG 3473715 0.9049092 74.9149 6
GATCA 2210595 0.9047858 9.8753395 110-119
ACCGC 3198235 0.90445906 12.128965 220-229
AGAAG 2437950 0.900907 17.061728 140-149
TCCTT 1850170 0.8916145 10.935725 1
GACTG 2633135 0.88648325 13.312167 90-99
GTTAT 1619135 0.87381583 10.718173 110-119
ATAGT 1714395 0.8703625 15.961132 120-129
AGCCG 3204890 0.86987686 20.604053 220-229
CGAGG 3327060 0.86670536 15.818899 220-229
GGTAG 2681010 0.86628735 12.10411 120-129
GCTTG 2419095 0.8657607 17.566042 90-99
ATCCA 2029705 0.86557233 10.517048 180-189
CTATC 1906600 0.86432594 8.629533 110-119
GGTGC 3079085 0.85266805 11.9201565 60-69
CGGAC 3138480 0.8518518 11.59947 220-229
CGTAT 1957175 0.8515571 7.8924 240-247
GAGAT 2155235 0.8466371 13.274426 210-219
TCATC 1861135 0.84371513 11.016246 110-119
TGGCA 2501850 0.8422842 5.7644625 100-109
TTACC 1856500 0.84161395 9.896583 45-49
CATTA 1588700 0.8403595 12.425386 110-119
TCTTC 1741900 0.83943814 47.66648 2
ACGCT 2392405 0.83920103 15.869061 190-199
AGTCT 1926355 0.83814746 15.753163 8
GATGA 2133605 0.8381403 6.5355277 60-69
GCCTA 2380300 0.8349549 17.73676 190-199
GGTTC 2329505 0.8336977 11.419565 160-169
CATGG 2453915 0.8261463 9.437136 200-209
CCGAG 3036475 0.82416534 19.285067 220-229
ATATG 1617755 0.82130045 6.0058618 50-59
GTCTG 2263625 0.8101201 14.201996 3
TTATG 1494885 0.80676043 11.077395 50-59
GTCTA 1838575 0.79995483 9.745473 30-34
ACATC 1867310 0.7963186 5.963662 110-119
TTTAT 1137845 0.79360896 10.260292 240-247
ACAAA 1692120 0.7920623 13.623672 130-139
CCTCC 2498955 0.7827415 11.121844 140-149
TGATG 1871345 0.78145516 12.021274 120-129
TATAC 1470070 0.7776088 8.969573 130-139
ATATA 1253565 0.7737048 10.80722 130-139
GGGAT 2384650 0.7705276 13.715579 100-109
GGTTA 1833215 0.76553243 8.130626 50-59
CCAGC 2690710 0.76093125 6.2647214 80-89
GTTCA 1736945 0.7557361 13.938964 160-169
TCAAC 1757410 0.7494515 7.9935 110-119
TATTT 1065870 0.7434088 9.736735 240-247
TCCGG 2567960 0.7409355 11.978861 70-79
TTGGA 1768350 0.73844546 6.442129 60-69
CATCC 2014130 0.7361269 7.0170236 110-119
GGATA 1867555 0.73362833 16.004766 35-39
ATCTT 1287480 0.7239544 13.093685 1
ATGCC 2062135 0.72334987 7.9806266 50-59
GGGCA 2763550 0.7199099 14.418172 150-159
TGCCA 2027665 0.71125865 7.1896453 60-69
TGACT 1629015 0.70877624 5.105173 2
AACGC 2141610 0.7066823 15.074513 180-189
CAAAC 1755445 0.7042229 14.704773 130-139
TATAG 1380830 0.7010186 6.7080216 120-129
GATTA 1380085 0.7006404 5.910458 160-169
TTTAC 1243255 0.6990865 13.463292 45-49
ATAAA 1203830 0.69895 7.993851 130-139
GACCA 2112670 0.6971327 6.496209 170-179
CACAA 1733275 0.6953291 8.831337 130-139
CAACG 2096550 0.69181347 15.336681 180-189
GAAAT 1443965 0.68960196 7.3844604 110-119
CCCCC 2724485 0.68800503 13.439227 80-89
GCGAC 2527965 0.68614477 7.4231997 70-79
AATAC 1366615 0.68002033 11.465267 130-139
AGGCA 2145400 0.6794511 6.556593 80-89
ACGCC 2392455 0.6765849 13.367574 180-189
CTGAC 1910555 0.6701791 10.438824 220-229
TATTG 1219790 0.658297 6.316251 240-247
GACCG 2411725 0.6545946 10.114819 210-219
CAGTC 1857370 0.65152293 5.81727 210-219
GCGGA 2483770 0.6470266 9.618943 220-229
CGCCG 2775705 0.6456732 11.669325 220-229
CCCGT 2139180 0.64309245 10.190517 140-149
ACTTC 1417165 0.6424486 30.604244 4
AAATA 1097735 0.63735074 12.801925 130-139
TCAAT 1188035 0.6284235 8.4365425 110-119
CCCTA 1712505 0.62588865 12.502825 110-119
TCCAC 1710540 0.62517047 11.040886 180-189
AGATG 1584460 0.6224206 5.785057 120-129
TTTCT 1021550 0.6106296 9.6586075 4
AATAA 1050610 0.6099897 7.4174128 130-139
CACGA 1840435 0.60730135 9.451776 180-189
CACGC 2130170 0.60241085 12.808953 190-199
AAGCA 1564270 0.60228324 5.956604 120-129
TAGCT 1378060 0.59958696 12.115542 50-59
CCGGC 2576960 0.59944195 9.631864 70-79
GGCCC 2569210 0.59763914 10.567816 70-79
AGTAA 1241455 0.5928882 5.108809 50-59
AATGG 1509165 0.59284264 6.885888 120-129
CACCG 2056875 0.58168316 9.239353 45-49
GGTGA 1800055 0.5816334 6.4972315 120-129
GTTCC 1558580 0.58117634 7.0824804 140-149
ACCTA 1358770 0.57945055 7.320495 130-139
GACGA 1808550 0.5727702 10.537103 220-229
TGATT 1058995 0.5715191 5.950582 50-59
CGGCA 2092935 0.56806815 11.265938 70-79
TCAGG 1683900 0.5669095 5.6405773 150-159
ATTAA 917360 0.5661979 6.4707713 110-119
TTAGC 1300705 0.5659302 9.512973 45-49
GCCGC 2416345 0.5620804 12.758065 220-229
GTCCT 1499525 0.5591554 6.2057786 45-49
CCGTA 1582875 0.5552364 7.0484896 230-239
GCTAC 1580395 0.5543665 8.059715 50-59
AAGAT 1147360 0.54795074 5.9825993 15-19
CTTTG 1182800 0.54707 6.953795 45-49
GGGGA 2187495 0.54692024 9.222167 4
GAAGA 1460895 0.5398513 6.5174184 15-19
CGGTT 1508270 0.539789 11.294165 160-169
CCTAT 1179625 0.5347637 5.4961963 110-119
TACTT 950730 0.5345987 11.827999 1
TAATA 859935 0.530755 8.036809 130-139
ACCCG 1865335 0.5275157 8.843645 140-149
AAATC 1040845 0.51791894 7.9111056 110-119
TTCAA 969495 0.51282454 5.507218 200-209
CCACG 1795665 0.5078131 8.233339 180-189
AGTTT 937575 0.5059911 5.210278 140-149
GGAGG 2020385 0.5051392 5.393173 6
ACGAC 1527100 0.503908 9.908442 220-229
ACCCC 1693295 0.4989362 9.503381 140-149
CTGCG 1721895 0.49681976 11.539896 25-29
ACATT 937890 0.49610668 6.165497 110-119
ATTTC 880645 0.49518967 6.198287 240-247
GTAAC 1193340 0.48842824 7.1297965 120-129
TATCC 1060965 0.48097116 5.621452 110-119
GGGTT 1396065 0.47953108 5.563786 100-109
GGGTA 1479280 0.4779847 5.503643 100-109
TATGT 882940 0.4765056 6.677634 140-149
TGGCC 1649330 0.47588247 15.3362465 2
AGTAT 926350 0.4702886 5.2794857 110-119
ATGCT 1074970 0.46771404 7.2735066 50-59
TGCTA 1050190 0.45693243 6.5154004 50-59
CAATC 1070710 0.45660672 6.348166 110-119
CATAA 895695 0.44569308 5.9368534 110-119
TAAAT 720320 0.4445841 7.990886 130-139
CCGGT 1539985 0.4443331 8.81579 160-169
GGTTT 1000930 0.44432566 5.2610383 100-109
TTGGT 977815 0.43406463 5.4441447 120-129
AACAT 870525 0.43316856 5.7386518 110-119
GGTCA 1274215 0.42898303 5.6630707 160-169
TGCGC 1482510 0.42774978 8.559631 25-29
TGACG 1265195 0.42594633 9.468771 220-229
ATTCT 738960 0.41551974 7.098357 2
GCGCT 1434545 0.41391042 7.783474 25-29
CGCGG 1850415 0.41311857 6.695271 220-229
GCATG 1224390 0.41220877 8.1077175 60-69
CTAAC 962835 0.4106032 5.7496834 110-119
ATGGC 1195545 0.40249762 7.473819 1
GCCTT 1066850 0.39781594 9.034663 1
CCTAA 931890 0.39740664 7.8981614 110-119
ACGAG 1254510 0.39730498 8.418425 180-189
CACTT 866845 0.39297 6.787151 3
GGTAA 989750 0.38880175 7.459438 120-129
AGCTT 893560 0.38878345 7.5756745 1
CAATG 949350 0.38856432 5.1580143 120-129
CATGC 1097160 0.3848587 6.7722807 60-69
CCGCG 1612955 0.37519902 6.96415 220-229
TTTGA 683350 0.36879078 5.8279257 45-49
CCGGG 1608050 0.3590088 5.1227946 80-89
GAGGC 1357580 0.3536521 6.196714 35-39
TGGGC 1206900 0.33421782 9.657042 1
TTCTT 555570 0.33209094 20.023333 1
CGAGC 1218145 0.3306311 7.072473 180-189
TGCTG 895505 0.32048887 13.72847 1
CTCGG 1066050 0.30758825 5.2575865 6
CGCTT 806695 0.30080718 6.02727 1
GCTTT 632275 0.29244056 5.1468453 45-49
CGGGA 1116165 0.29076302 5.033793 80-89
GACTT 667010 0.2902127 6.930808 1
AACTT 548160 0.28995493 11.136458 3
ATGTG 687850 0.28723934 5.003914 140-149
CTCTT 590895 0.2847579 9.53281 1
AACCT 645795 0.27540076 5.0145826 2
TCACA 628125 0.26786536 5.2813387 5
GCGAG 996040 0.25947025 6.1973963 240-247
TTGGC 716200 0.2563181 7.560738 1
GAGGT 781185 0.25241634 6.885758 7
TCGGT 700645 0.25075117 6.225044 7
TTCCT 501155 0.24151136 6.3352895 4
GTCTT 516625 0.23894998 11.782432 1
CCCTT 610895 0.23734455 5.5156984 3
ATTGT 434520 0.23450202 5.3310614 240-247
TAACT 441255 0.23340642 6.823839 2
TGTAA 456645 0.23182915 8.08563 25-29
AATCT 438125 0.2317508 7.627793 2
CGGGG 1048585 0.22468562 8.958969 3
CCTCG 734345 0.22076294 5.749433 5
TGCTT 464765 0.21496364 11.486123 1
TCGCA 501955 0.17607437 6.6891594 7
TAGGC 436360 0.14690694 7.1345587 1
TTGCT 231860 0.107240155 5.7177153 4