FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_1_SL248338.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_1_SL248338.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 6426955
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30982 0.4820634343946706 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 25062 0.38995138444255484 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24535 0.38175154486066887 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24410 0.37980661137350424 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23974 0.3730226833702741 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23051 0.3586612945010506 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 22532 0.3505859306623432 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21679 0.33731370454593196 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 20671 0.32162976090543655 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 20350 0.31663517171039784 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19061 0.29657901759075644 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18848 0.2932648509286279 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18797 0.2924713180658648 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18647 0.29013739788126724 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18610 0.2895616975690665 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18191 0.2830422805200908 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17747 0.2761338767736821 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17547 0.2730219831942187 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17363 0.27015904110111244 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17163 0.26704714752164904 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17124 0.2664403282736537 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17111 0.2662380551909886 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16721 0.26016986271103504 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16626 0.25869171326078994 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16531 0.2572135638105448 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15636 0.24328784004244622 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15493 0.24106283613312993 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 15313 0.2382621319116129 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15117 0.23521247620373878 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14983 0.23312750750549832 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 14976 0.23301859123021712 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14945 0.2325362477254003 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14616 0.22741718278718304 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14531 0.2260946280159111 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13707 0.21327362646852205 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13508 0.21017729235695598 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13442 0.20915036747573304 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13361 0.2078900505760504 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13138 0.20442028923494873 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13137 0.20440472976705143 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13032 0.20277098563783313 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 12724 0.19797866952545956 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 12483 0.1942288377622062 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 12196 0.18976327047567626 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11952 0.18596676030873097 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11952 0.18596676030873097 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11619 0.18078545749892447 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 11383 0.17711342307515768 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11362 0.17678667424931402 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11203 0.17431271885364064 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 11029 0.17160537143950752 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 10869 0.1691158565759368 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 10771 0.16759102872199977 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10734 0.16701532840979902 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10325 0.16065150603979647 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 10207 0.15881548882791308 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 10178 0.15836426425889086 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9697 0.15088016020028147 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9421 0.14658574706062202 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 9403 0.14630567663847033 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9315 0.14493644346350643 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9150 0.14236913126044914 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 8914 0.13869709683668238 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 8833 0.1374367799369997 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 8096 0.1259694520966772 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 7873 0.12249969075557555 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 7822 0.12170615789281237 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 7679 0.11948115398349607 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 7613 0.11845422910227316 No Hit
AAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 6536 0.10169668217686291 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 6502 0.10116766026835415 No Hit
TAGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 6491 0.10099650612148366 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 13341040 8.306421 67.361206 35-39
TGGAT 10087520 7.796148 81.154274 35-39
TATTA 5782205 7.0577197 147.16429 240-247
TCACC 10284145 6.9582224 79.20849 160-169
TCTCC 8875490 6.3664293 86.02883 20-24
AGTGG 10419830 6.2234607 41.384747 100-109
TCCCT 8659745 6.2116737 75.6391 15-19
CTGTG 8814810 5.8184943 88.05323 25-29
CTGAG 8932540 5.561592 50.834026 15-19
TGTAT 5295805 5.296049 69.278725 240-247
TGGGT 8214040 5.201175 46.580734 100-109
TTACT 4982745 5.1944747 128.51514 240-247
TTCAC 6023615 5.058931 78.47699 40-44
CTCCA 7315600 4.9497137 42.80711 80-89
CTCTG 7129340 4.9056883 75.94823 35-39
CCTGA 7516465 4.8785505 52.427128 15-19
ATTAC 4799875 4.7198634 122.90146 240-247
AAGGG 8327210 4.691345 41.61366 90-99
ATTCA 4758000 4.6786866 117.31806 40-44
TCTGG 6886000 4.5453224 138.3979 35-39
GAAGG 8014370 4.515099 33.631313 90-99
TGAGA 6177415 4.5032806 97.68811 15-19
ACACG 7322835 4.483147 57.52595 230-239
ACTAC 5584740 4.4241624 38.429176 130-139
TCAGT 5482310 4.4168453 97.60925 7
CCAGG 8780210 4.404105 55.48748 80-89
ACCAT 5555175 4.400741 72.79014 160-169
TGGAG 7350960 4.390514 40.23503 90-99
TACTA 4448150 4.374002 32.192936 130-139
GACAC 7132870 4.366848 53.49246 230-239
CCCTG 7869505 4.362411 88.1578 10-14
GAGAC 7414195 4.3542647 95.28294 8
TACTG 5300905 4.2706957 91.88919 240-247
CACCA 6666985 4.2548685 61.670265 160-169
TCCAG 6505855 4.2226157 42.103218 80-89
CAGCC 8031745 4.1996746 57.851295 30-34
GGGTC 8201545 4.183781 128.75703 8
AGCCT 6433950 4.1759458 53.490253 30-34
CACCT 6123225 4.1429563 45.94222 20-24
AGACT 5259920 3.9971855 71.82414 15-19
CAAGA 5544310 3.9741955 48.905853 180-189
GACTC 6118545 3.9712327 52.71046 20-24
CTGGG 7765185 3.9611845 135.56339 3
GATTC 4902905 3.950045 60.205322 40-44
TGAAG 5380225 3.922136 42.586605 150-159
GCTGG 7512095 3.832078 34.803364 90-99
ACTGG 6115020 3.8073442 46.68866 60-69
ACTGT 4648190 3.744833 79.38721 240-247
CCTGT 5350835 3.6819015 60.851254 25-29
ACTCT 4311260 3.6208103 69.46021 20-24
GTATT 3614590 3.6147566 79.577644 240-247
GAGTG 5994380 3.5802684 40.259262 100-109
GGATT 4625885 3.575119 57.48973 40-44
TCCTG 5029455 3.4607604 63.586853 20-24
TATCT 3313915 3.4547317 54.89475 200-209
AGACA 4795040 3.437114 41.748295 170-179
GGACA 5832380 3.4252844 32.201878 220-229
GGTCC 6416775 3.4122672 143.90642 9
CTCCT 4742950 3.4021392 93.335495 20-24
AGTAG 4649905 3.3897393 32.333355 50-59
AGCTG 5407500 3.3668268 38.66934 60-69
GTCCC 5992635 3.3219802 75.6913 10-14
CCTCA 4865190 3.2917733 82.46402 5
GTCTC 4780665 3.2895684 35.51224 30-34
CTGCA 5058785 3.283397 48.001717 25-29
CCATC 4770055 3.2274053 38.392487 45-49
CATCT 3833460 3.21953 33.741966 170-179
GGAGT 5381480 3.214201 38.66612 90-99
AAGAA 3758645 3.1545033 42.650715 180-189
AGGGA 5559225 3.1319304 43.200493 80-89
GGAAG 5344790 3.0111234 32.505352 80-89
GGCTG 5871675 2.9952652 36.156345 90-99
GAGCT 4776915 2.974211 31.89124 60-69
CAGGG 6091680 2.9311423 38.270443 80-89
GTGAA 4016820 2.928226 41.431168 150-159
ACCTT 3466210 2.9110951 74.36695 40-44
GACAA 3994310 2.8631463 26.555803 180-189
CTATG 3550085 2.8601403 28.28157 50-59
GGGAA 5028585 2.8329809 35.808655 80-89
TGTGC 4266630 2.8163242 58.577827 25-29
ATCTC 3293835 2.7663262 50.69711 170-179
GAGTC 4428470 2.7572618 30.21586 150-159
ATCAG 3568800 2.712048 30.329666 45-49
CGCCA 5181915 2.709543 40.97368 70-79
ATGAA 3028815 2.6949198 30.70779 210-219
CCCTC 4658480 2.692008 28.559908 20-24
AGAAC 3754775 2.6914458 34.29953 190-199
ATCTG 3335260 2.6870656 40.86101 200-209
GAACA 3747420 2.6861737 39.789993 210-219
CAGTG 4237040 2.6380725 75.42738 8
AGGCT 4209775 2.6210973 20.905434 25-29
AGGGC 5446630 2.620763 34.1451 150-159
CTACT 3098005 2.6018584 23.455652 50-59
CTGTC 3770235 2.594293 52.6897 30-34
CCAAG 4229650 2.5894537 43.045776 180-189
CTACA 3263535 2.5853324 20.262142 190-199
TGCAA 3401300 2.5847592 39.684895 200-209
CACTG 3925475 2.5478237 21.307365 30-34
GTGGA 4250800 2.538879 28.340225 100-109
GGGCT 4917835 2.5086915 44.14758 90-99
GCAGC 4956650 2.4862287 35.340168 30-34
CTTCA 2946475 2.474596 53.1237 45-49
GTGTA 3196710 2.4705799 42.052376 230-239
GTAGT 3194780 2.4690883 28.673386 120-129
CAGTA 3247820 2.4681246 23.232166 45-49
CTCTC 3368500 2.4162405 98.56358 20-24
GTGGT 3802160 2.4075487 32.974953 120-129
TATGC 2977050 2.3984723 21.31536 50-59
ACAAC 3192605 2.385612 22.198055 180-189
TGGTG 3757750 2.3794284 36.882008 35-39
TATAT 1949040 2.378985 27.625067 240-247
CCGCC 5309120 2.3709931 35.18705 70-79
GCTCC 4265120 2.364343 34.73432 80-89
CAGGC 4709200 2.362109 34.03934 70-79
TCCAA 2978020 2.359151 47.074154 180-189
GTATC 2925075 2.3565984 25.453228 200-209
TGAAC 3049075 2.317092 42.410137 210-219
GCCTC 4177625 2.3158407 71.64348 4
CACGG 4597810 2.3062363 50.779274 230-239
TCTGT 2697005 2.3035824 28.039074 210-219
TATCA 2336715 2.297763 19.82067 170-179
CCTTC 3165450 2.2705917 57.547188 45-49
CAAAT 2446905 2.269568 39.396656 200-209
GCTAT 2813490 2.2666993 34.997635 50-59
TACAT 2296530 2.258248 19.189077 190-199
GTGGG 4574775 2.23867 30.532999 100-109
ACAGC 3614390 2.2127824 30.398619 210-219
GGGGG 5805295 2.1954336 96.688126 5
ACGGC 4366810 2.190368 56.095497 230-239
AACTA 2359180 2.1882007 39.120884 130-139
AAATG 2455075 2.184429 37.232162 200-209
AATGA 2435525 2.167034 29.187885 210-219
TCTAT 2077750 2.166039 21.037437 110-119
ATATC 2202305 2.1655936 15.521813 170-179
GGCCG 5253340 2.1589243 27.975662 230-239
TGCAG 3455655 2.1515653 44.786755 30-34
CCTCT 2999035 2.1512213 49.825615 35-39
AGCAC 3488435 2.1356711 23.48408 130-139
TGCAC 3287055 2.133458 28.761412 25-29
CATAT 2167580 2.1314476 16.167353 160-169
CTCAC 3139450 2.1241426 58.227352 20-24
GCAGA 3587200 2.106718 26.131594 140-149
GGCTC 3947355 2.0990965 21.496122 40-44
TCCGC 3776700 2.0935905 43.578636 70-79
TGGTA 2696165 2.0837333 32.652378 120-129
AGAGT 2839750 2.0701525 33.26742 150-159
TAGTA 2189560 2.065396 19.998192 120-129
CAGAG 3516540 2.0652199 34.659412 170-179
TTCAG 2543430 2.0491245 49.26922 45-49
GCCTG 3815855 2.0291686 32.94479 210-219
TGAGC 3227490 2.0095055 19.164444 200-209
TCCAT 2388305 2.0058172 29.214949 45-49
GGTCT 3038315 2.005536 35.381695 15-19
GCTGT 3036125 2.0040905 22.625265 230-239
GCCAG 3987750 2.0002337 36.514587 70-79
ATGGA 2738670 1.9964658 13.02312 100-109
AACAG 2776115 1.9899362 38.287933 210-219
GGATC 3190085 1.9862163 19.623268 70-79
TGGGG 4017920 1.9661726 126.11162 4
ACCCT 2901865 1.9633933 45.865913 10-14
TCTCT 2202705 1.9612424 34.80651 35-39
GTCAC 3016350 1.9577572 40.253185 160-169
TGGGA 3273960 1.9554408 16.824251 100-109
TAGTG 2529140 1.9546477 28.995409 120-129
ACTAT 1985505 1.9524077 17.933186 130-139
GGTGG 3983235 1.9491993 19.812778 40-44
GCACA 3182805 1.94856 19.781 130-139
ACCAG 3168930 1.9400654 15.970945 190-199
ATACT 1970385 1.9375396 29.414675 130-139
CTATT 1855785 1.9346421 21.310423 110-119
CAGTT 2393680 1.9284778 27.914923 190-199
TGTGA 2488910 1.923556 21.436739 210-219
CAGAC 3134425 1.9189409 28.200384 140-149
GATGG 3209845 1.9171468 21.012466 100-109
CCTGC 3445090 1.9097644 50.48138 20-24
CTGTA 2363125 1.9038612 27.02385 190-199
TGTCT 2228835 1.9037062 53.746033 30-34
AGTCA 2504905 1.9035593 31.964294 160-169
TACAA 2049940 1.9013727 19.415308 130-139
CCAGA 3097545 1.8963624 36.419407 170-179
AGAGA 2756330 1.895309 30.340439 170-179
CATGA 2450835 1.8624698 25.346556 60-69
AGCTA 2427470 1.8447139 27.334267 50-59
TCAGC 2839305 1.8428468 12.102033 45-49
CCGTG 3437010 1.8277088 22.59583 230-239
TTCCA 2166745 1.81974 24.200352 180-189
ATTGG 2339880 1.8083781 22.390846 100-109
CACAG 2952805 1.8077505 16.323011 140-149
CAAGG 3069985 1.8029637 17.50026 80-89
AGTTC 2234290 1.8000647 24.694227 190-199
ACCTG 2771390 1.7987666 32.511715 25-29
GTGCA 2868515 1.7859999 52.429726 25-29
GCCGA 3488115 1.7496195 22.103918 220-229
GGATG 2912840 1.7397543 22.757088 100-109
GGAGC 3612725 1.7383403 13.577309 200-209
CTCAG 2673545 1.7352604 78.77673 6
AGTTA 1839100 1.7348099 17.813633 50-59
GCTGA 2779225 1.7304058 29.08125 200-209
ATGCA 2274685 1.7286077 16.215427 60-69
AGGGG 3732620 1.7229025 34.806744 90-99
GCAAA 2394500 1.7163925 36.13302 200-209
GGGGC 4330400 1.7071708 30.059776 90-99
TTCTG 1989135 1.6989722 42.39806 30-34
AACAC 2257290 1.6867161 24.542124 190-199
CCTGG 3156490 1.678536 34.96222 2
TGACC 2575270 1.6714752 15.557159 210-219
CGATT 2056715 1.6570008 36.61947 160-169
AGGAC 2800640 1.6447811 23.395164 220-229
GCACT 2529315 1.6416482 27.887766 25-29
GTTAC 2031870 1.6369842 17.293785 50-59
CGTCC 2948320 1.6343831 20.908129 180-189
TTAGT 1622395 1.6224698 27.865973 110-119
GGGCC 3937230 1.6180527 28.678133 2
CAGCT 2485570 1.6132554 13.054821 50-59
CTGAA 2115435 1.6075883 26.395891 200-209
GAGGA 2848390 1.6047127 30.610826 220-229
AGTGA 2199835 1.6036601 88.143196 9
TCTCA 1903940 1.5990233 27.740154 100-109
ACAAT 1703470 1.5800127 25.148132 180-189
GTCCG 2946720 1.5669861 34.827213 70-79
GGCTT 2370965 1.5650306 21.89118 25-29
TCTGC 2271625 1.5631018 36.713764 200-209
GTTCT 1818020 1.5528184 25.66964 190-199
CCATG 2386510 1.5489608 16.44323 160-169
CATCA 1954705 1.5484934 34.8082 45-49
CTCCC 2669435 1.5425934 14.769919 190-199
CTTTA 1469380 1.5318177 42.531593 45-49
TAGCA 2013415 1.5300599 12.654448 130-139
CTCAA 1922935 1.5233256 21.191 150-159
TTCTC 1696455 1.510488 24.0954 190-199
GAGCA 2553685 1.4997475 7.9818416 200-209
TACGC 2300865 1.493373 26.183908 140-149
CAACT 1878465 1.488097 19.158867 130-139
CTGGT 2239025 1.4779394 33.546654 35-39
CCATA 1856605 1.4707795 16.570026 160-169
AACCC 2296625 1.4657056 22.530523 140-149
ACTCC 2160030 1.46147 17.793285 140-149
CAACC 2275905 1.4524822 17.198975 140-149
GGGGT 2929910 1.433754 120.94773 7
ATCTA 1454695 1.430446 22.154718 110-119
GTCCA 2198420 1.4268812 30.934267 180-189
CTACG 2189640 1.4211826 16.837639 130-139
TCAAG 1863220 1.4159219 26.17808 150-159
GGCAG 2937835 1.4136024 13.795527 150-159
AAGCT 1855245 1.4098614 19.247965 200-209
TGTCC 2043865 1.4063804 57.50532 15-19
CACGT 2153880 1.3979725 18.882954 180-189
GCCGT 2628590 1.3978131 32.982685 230-239
GATTG 1795455 1.3876188 26.019316 100-109
GAACT 1819380 1.3826064 16.556808 190-199
TCTGA 1707035 1.3752797 23.29146 220-229
TTACA 1392800 1.3695827 10.265083 120-129
AGCAG 2315105 1.3596326 14.194907 50-59
AAGAG 1976615 1.3591608 21.342024 150-159
ATACA 1462120 1.3561542 23.025412 35-39
ACATA 1462015 1.3560569 23.064276 130-139
CCAGT 2082565 1.3516856 21.471947 190-199
GTGGC 2643780 1.3486481 15.394339 40-44
ATCCG 2077525 1.3484145 26.064579 70-79
GTGAC 2162170 1.346214 17.022041 210-219
CAATT 1365905 1.3431361 26.012943 180-189
CCTTT 1506210 1.341098 49.169346 45-49
TGGAA 1825145 1.3305144 20.04884 120-129
AATTC 1337305 1.3150128 25.950659 180-189
TCCGT 1906910 1.3121419 14.084802 150-159
AGACC 2139760 1.3099924 107.273796 9
ACAGT 1721200 1.3079963 13.4104185 120-129
AACCA 1743530 1.3028191 20.122303 190-199
ACGTC 1999720 1.2979152 20.692904 180-189
GATCC 1998535 1.2971462 25.912447 70-79
GGCCT 2427470 1.2908629 68.662384 3
CGGCC 3008340 1.2887889 34.54944 230-239
AGTCG 2068140 1.2876688 17.490997 150-159
TCACT 1527640 1.282988 15.452114 190-199
ACAGA 1786985 1.2809218 20.657728 140-149
CGACA 2078885 1.2727239 16.66415 70-79
CTTCG 1847345 1.2711554 112.35982 3
ATTAG 1344945 1.268677 27.411276 110-119
ACATG 1653540 1.2565792 14.993181 190-199
GTGCG 2451025 1.2503196 19.493973 240-247
TGCGA 2005900 1.2489169 16.64863 240-247
GTCGA 1996275 1.2429241 13.638065 150-159
CCTAC 1835775 1.24208 17.497534 190-199
ACGCA 2014885 1.2335421 22.790764 140-149
TCGGA 1978510 1.2318633 101.18642 5
GAGAG 2181505 1.2290063 29.893555 220-229
TACCA 1548275 1.2265245 10.758855 45-49
TGGAC 1966600 1.224448 16.107613 80-89
TTGGG 1932520 1.2236823 16.57312 100-109
CTTCT 1367270 1.2173886 22.87552 30-34
TTCGG 1833225 1.2100782 107.89831 4
ATCAT 1217370 1.1970772 16.061275 110-119
TCGAG 1915610 1.1927001 13.160083 150-159
GAAGT 1635620 1.1923524 14.070036 140-149
CGTGT 1799230 1.1876388 26.901926 230-239
TAGAC 1556595 1.1829075 19.47566 170-179
TGAGT 1530125 1.1825583 21.17104 90-99
GGACT 1882805 1.1722752 13.280754 90-99
ATTAT 959935 1.1716901 8.859647 50-59
AGAGC 1975000 1.159893 28.80447 220-229
GCAAG 1969885 1.1568891 16.938112 25-29
ACACA 1547700 1.1564889 7.854057 130-139
TGTGT 1405805 1.1518453 16.803251 240-247
GAACC 1876030 1.148533 11.650805 180-189
CCGAT 1767180 1.1469854 24.987692 160-169
ATTCC 1358830 1.1412128 23.749516 180-189
ATCAA 1230095 1.1409451 13.581923 110-119
AGCTC 1756480 1.1400408 14.628896 210-219
GCTTC 1656085 1.1395496 29.535206 2
TAGTT 1131950 1.132002 16.134985 50-59
GCACC 2163375 1.1311952 12.619216 130-139
GACCC 2156425 1.1275612 45.09678 10-14
GCCCC 2523885 1.1271386 12.940227 80-89
GGGTG 2302915 1.1269335 14.269496 60-69
GAAGC 1918020 1.1264293 15.105229 200-209
ATATT 917505 1.1199003 29.306866 240-247
CGCTG 2101470 1.117505 13.405825 190-199
CGGCT 2101255 1.1173906 24.43583 230-239
GGAGA 1975155 1.1127536 91.30515 7
CGCAG 2217410 1.1122408 17.857685 140-149
CTATA 1128725 1.1099098 14.448857 50-59
GTAGC 1781725 1.1093408 12.238922 50-59
AAGGC 1881235 1.104826 29.534056 25-29
ATGAG 1506020 1.097875 21.44472 60-69
AGGTC 1762465 1.097349 18.328924 10-14
CACAT 1382630 1.0953023 15.068809 130-139
ACAAG 1524030 1.092434 18.121462 80-89
CTTGA 1353820 1.0907105 22.300446 90-99
TTATT 841345 1.0887257 19.49559 240-247
ATGGT 1397690 1.0802057 10.787168 35-39
TTGAG 1393580 1.0770293 20.904161 90-99
CCCCT 1858810 1.0741554 9.820972 140-149
GTAGA 1469055 1.070928 19.577448 170-179
GGGAG 2315060 1.0685853 13.10505 5
TGGCT 1617005 1.0673554 33.738235 40-44
AGGCC 2125710 1.0662446 13.895455 2
CAGCA 1740925 1.0658197 12.926334 45-49
ATGGG 1783085 1.0649846 19.525877 100-109
CGAGT 1699630 1.0582265 16.920403 160-169
CGTGA 1684055 1.0485291 21.47032 150-159
TTTAG 1044540 1.0445882 31.525364 45-49
CTCCG 1880490 1.0424379 10.21382 140-149
TTATA 847960 1.0350142 13.6353855 110-119
GTATA 1095760 1.0336226 11.221477 240-247
GCCAA 1680685 1.0289401 16.352962 180-189
TCATA 1040975 1.0236225 9.594617 110-119
CATAC 1277045 1.0116594 15.393317 130-139
TTTCA 969820 1.0110302 8.122252 100-109
ACCAA 1352175 1.0103865 18.78684 130-139
AAGGT 1383765 1.0087523 20.717875 15-19
GATCT 1251020 1.0078893 10.3432255 220-229
TACAG 1324550 1.0065689 9.100301 120-129
AAACT 1084660 1.0060503 17.424902 130-139
ACACC 1574675 1.0049573 13.519208 40-44
AATCA 1081070 1.0027205 15.493814 110-119
ACTCA 1264895 1.0020343 14.406526 190-199
GCTCT 1450875 0.9983449 20.228912 210-219
CCAAC 1551540 0.9901925 15.270818 130-139
GACAG 1685925 0.9901229 16.005411 70-79
AACTC 1243190 0.98483986 18.419107 190-199
TAACA 1050700 0.9745515 9.532611 120-129
CCGTC 1755790 0.9733112 11.010662 140-149
AGCCC 1854135 0.96949846 12.685493 80-89
ATGAC 1272850 0.9672804 11.670946 160-169
TATGG 1251230 0.9670141 13.867985 35-39
TGGTT 1162375 0.9523912 10.23061 50-59
AACTG 1251430 0.9510026 13.162383 60-69
ACAGG 1609865 0.9454536 15.626065 70-79
ATAGT 1001735 0.9449295 17.550123 120-129
GAGCC 1876420 0.94120204 21.001162 220-229
TACAC 1187755 0.94092494 23.331627 35-39
GGGAC 1952705 0.939586 10.201197 90-99
CCCAG 1794370 0.9382482 15.819695 80-89
GATAC 1233715 0.9375404 24.641893 35-39
GCAGT 1505075 0.93709236 7.2325377 50-59
ATGAT 992860 0.9365577 8.8953495 120-129
AAGTT 984460 0.9286342 18.241829 140-149
GTTAT 927570 0.9276128 10.87735 110-119
AGATC 1220030 0.9271407 13.380765 210-219
CAGAA 1289870 0.9245867 18.675343 140-149
GGTAT 1195025 0.92357594 9.539094 110-119
GGTAG 1544990 0.92277735 12.8855915 120-129
CGGAG 1913940 0.9209333 78.0994 6
CCCCA 1653705 0.90139836 17.819818 80-89
GCCAT 1378965 0.8950152 7.9577403 60-69
ACCGC 1709370 0.893803 13.029233 220-229
CGAGG 1855350 0.89274144 16.791857 220-229
AGCCG 1776320 0.89099246 21.9841 220-229
TGAGG 1471245 0.8787317 12.611279 220-229
GACTG 1399770 0.8715272 12.927146 90-99
AGAAG 1259630 0.8661473 16.592718 140-149
GTTTC 1011970 0.8643501 5.789196 100-109
CCGAG 1701925 0.85367626 20.686184 220-229
TCCTT 957155 0.8522308 11.254619 45-49
TATAC 861750 0.84738505 10.374126 130-139
CGGAC 1682660 0.8440131 11.668224 220-229
TGGCA 1325635 0.8253692 5.6341343 100-109
TCTTC 926190 0.82466024 48.77587 2
GGTTC 1247545 0.82348156 12.050599 160-169
GATCA 1083460 0.82335675 9.048532 110-119
ACGCT 1267950 0.822961 16.640537 190-199
GATGA 1126325 0.82108086 6.793984 60-69
GCTTG 1233765 0.81438565 16.978182 90-99
GTCTA 1006105 0.81057256 11.24591 30-34
ATCCA 1022255 0.80981785 9.654162 180-189
GGTTA 1042765 0.8059017 9.150929 50-59
ATATA 698700 0.80442995 12.457071 130-139
GGTGC 1576240 0.8040733 11.44825 60-69
GAGAT 1102825 0.8039496 12.912693 210-219
TTATG 801160 0.80119693 12.053971 50-59
TTACC 941270 0.79052526 9.16859 45-49
CGTAT 980065 0.7895933 8.204215 240-247
ATATG 836955 0.7894937 5.806683 50-59
GTTCA 978260 0.7881391 14.774086 160-169
GCCTA 1209915 0.7852935 16.873293 190-199
TTTAT 605570 0.78362584 10.769256 240-247
CATTA 796345 0.7830704 13.474705 110-119
CATGG 1256325 0.7822152 8.852796 200-209
TCATC 929630 0.78074944 9.636248 110-119
CCAGC 1492690 0.7805044 6.9370275 80-89
AGTCT 961465 0.77460814 13.260086 8
CTATC 921045 0.7735393 7.5829453 110-119
ACAAA 871570 0.76252645 13.419697 130-139
CCTCC 1315305 0.7600787 10.6236515 140-149
ACATC 957325 0.7583811 6.0801725 110-119
TGATG 975260 0.7537304 11.811872 120-129
GTCTG 1136030 0.74987257 14.448766 1
TATAG 792795 0.74783784 7.0868373 120-129
GAAAT 839675 0.74710965 8.312673 110-119
AACGC 1219080 0.7463386 16.142033 180-189
TCAAC 935750 0.7412897 7.7287426 110-119
TATGA 782950 0.73855114 5.4576845 50-59
TATTT 569085 0.73641306 9.811203 240-247
GGGAT 1229505 0.73434746 13.405416 100-109
CAACG 1197570 0.73317 16.444105 180-189
ATGCC 1119570 0.7266552 8.540027 50-59
TGCCA 1108785 0.7196553 7.6463194 60-69
ATAAA 660225 0.7169949 7.999139 130-139
CCCCC 1523660 0.7093308 14.217694 80-89
GGATA 966030 0.70422727 15.389995 35-39
TCCGG 1321310 0.70263696 11.892408 70-79
ACGCC 1343395 0.7024403 14.266685 180-189
ATCTT 666620 0.6949464 13.58667 1
TTGGA 895210 0.6918637 6.0368237 60-69
GGGCA 1432510 0.68928295 13.80058 150-159
GACCG 1351310 0.6778098 10.158215 210-219
GACCA 1105670 0.6769074 6.4459567 170-179
AATAC 727410 0.6746917 11.753349 130-139
CCCGT 1215770 0.6739545 10.849858 140-149
CATCC 994450 0.67284197 6.374629 110-119
CACAA 900140 0.67261213 8.581334 130-139
CAAAC 892615 0.6669892 14.024521 130-139
GCGGA 1380145 0.6640864 10.031866 220-229
TGACT 820795 0.6612768 5.1732974 2
GCGAC 1311870 0.6580269 7.180799 70-79
TCAAT 667195 0.6560732 9.258618 110-119
TAGCT 812925 0.65493625 13.49741 50-59
TTTAC 624710 0.6512556 12.429136 45-49
TATTG 642175 0.6422046 5.830624 240-247
AAGCA 893610 0.6405451 6.383723 120-129
AAATA 587895 0.6384455 13.080813 130-139
GATTA 668285 0.63038844 5.28022 50-59
ACTTC 746840 0.6272333 31.775951 4
TTCAT 598320 0.62374413 5.1968355 100-109
CTGAC 960145 0.6231806 9.961082 220-229
CACGC 1189060 0.621741 13.432011 190-199
CGCCG 1448240 0.62043375 12.312085 220-229
ACCTA 780860 0.6185877 8.349545 130-139
AGGCA 1048275 0.6156389 6.184514 80-89
TTAGC 757835 0.61055285 10.429432 45-49
CCCTA 887015 0.6001518 12.0689745 110-119
CAGTC 916555 0.5948886 5.6427975 210-219
TTTCT 537535 0.59409124 9.337137 4
AGATG 807005 0.58829945 6.059752 120-129
CCGGC 1369130 0.58654255 9.521007 70-79
GCCGC 1362655 0.58376867 13.535418 220-229
ACCCG 1096970 0.5735886 9.968249 140-149
AATAA 521830 0.56669986 7.4294734 130-139
CGGTT 855960 0.5650035 11.964488 160-169
AATGG 772950 0.5634736 6.5884433 120-129
TCCAC 829010 0.56090575 10.015076 180-189
CGGCA 1109410 0.55647403 11.115879 70-79
GTTCC 805715 0.5544113 6.8703876 140-149
CACGA 895810 0.548428 8.622332 180-189
GGCCC 1278290 0.54762626 9.871609 70-79
CACCG 1036530 0.54198545 9.275714 45-49
GACGA 922140 0.54156137 10.0845995 220-229
AAATC 580520 0.5384474 8.837404 110-119
TAATA 465225 0.5356246 8.063962 130-139
TCAGG 849735 0.52906346 5.376522 150-159
TACTT 507105 0.5286532 11.828153 1
GCTAC 812175 0.5271409 7.8195486 50-59
ACATT 527310 0.51852006 7.0658493 110-119
GTCCT 752880 0.5180556 7.113889 45-49
GGGGA 1120980 0.5174219 7.699314 4
GGTGA 859885 0.5135842 5.905861 120-129
CCGTA 785105 0.5095712 7.3266954 230-239
TGATT 508495 0.50851846 5.678121 50-59
CTGCG 946670 0.5034135 12.736006 25-29
AAGAT 564825 0.50255895 5.729765 120-129
CTTTG 586110 0.50061184 6.681454 45-49
GTAAC 658290 0.5002561 7.429049 120-129
AGTAT 525220 0.49543634 6.142109 110-119
TATGT 489250 0.48927256 7.1061897 140-149
TTCAA 496430 0.48815474 5.5748916 200-209
CATAA 523765 0.48580566 6.358789 110-119
CAATC 605965 0.48003805 6.969435 110-119
ACGAC 783840 0.47987834 9.495445 220-229
GGAGG 1037085 0.47869766 5.490301 6
ACCCC 877085 0.47807983 9.321582 140-149
AGTTT 474565 0.47458687 5.109106 140-149
GGGTA 793150 0.47372535 5.338975 100-109
ATTTC 454365 0.47367212 6.2306385 240-247
CCACG 888415 0.46453843 7.500891 180-189
GGGTT 732800 0.464013 6.008838 100-109
CATAG 610380 0.46384776 5.3162427 120-129
CCGGT 869195 0.46221438 9.340532 160-169
GGTTT 561090 0.4597287 5.977187 100-109
TGGCC 862105 0.45844418 14.473137 2
ATTAA 387355 0.44597104 6.287873 110-119
AACAT 473190 0.438896 6.256655 110-119
ATGCT 534760 0.43083152 6.5354195 50-59
GCATG 691495 0.4305398 8.722459 60-69
CCATT 512075 0.430066 5.214163 110-119
CGCGG 1045265 0.42956442 7.2817574 220-229
GAAGA 621190 0.42714295 5.421237 15-19
TGCGC 796945 0.4237938 9.51106 25-29
CTAAC 533190 0.4223866 6.095445 110-119
TAAAT 366840 0.42235166 7.963352 130-139
TGCTA 523380 0.4216632 5.77757 50-59
GCGCT 791400 0.42084512 8.743729 25-29
CTGTT 483045 0.41258135 5.0535793 240-247
CCTAA 514645 0.40769547 8.365027 110-119
TGACG 653260 0.40673384 9.072048 220-229
GGTCA 633090 0.39417556 5.0780077 160-169
ATGGC 623895 0.38845047 6.9853334 1
CCGCG 905385 0.3878717 7.613814 220-229
GGTAA 531575 0.3875134 7.731649 120-129
ATTCT 369355 0.38504985 7.4876924 2
GCCTT 546440 0.37600455 10.332736 1
CACTT 440770 0.37018052 7.234812 3
CATGC 566100 0.36742637 6.5520306 60-69
ACGAG 616810 0.36224478 7.605168 180-189
AGCTT 441385 0.3556036 7.7557244 1
TTTGA 345635 0.34565094 5.790519 45-49
TACCT 397105 0.3335085 5.237678 2
TGGGC 626245 0.3194608 9.297473 1
TTCTT 287610 0.3178706 20.324928 1
GAGGC 653090 0.3142483 5.3651853 35-39
CGAGC 600440 0.30117744 6.3454323 180-189
ATGTG 387715 0.2996458 5.3939433 140-149
TGCTG 453100 0.299083 13.852109 1
CGCTT 423980 0.29174 6.141366 1
CTCTT 306650 0.27303475 9.297443 1
GACTT 332510 0.267888 7.432374 1
AACTT 268370 0.2638964 11.343945 3
TCACA 324315 0.25691837 5.9009533 5
GAGGT 415600 0.24822575 6.9828053 7
CCGCA 473930 0.24781063 5.0659156 220-229
GCGAG 511085 0.24591951 6.033416 240-247
TAACT 238105 0.2341359 7.5118985 2
CCCTT 326295 0.23405287 6.033265 3
GTCTT 268875 0.22965316 12.468157 1
TTGGC 347500 0.22937837 7.0546775 1
TTCCT 254885 0.22694428 6.365219 4
CTCGG 425090 0.22605138 5.127419 6
AATCT 220075 0.21640645 7.5016127 2
TGTAA 208910 0.19706331 6.734674 25-29
TGCTT 229315 0.19586393 11.873962 1
CGGGG 485220 0.19128798 7.5916386 3
CCTCG 339935 0.18844084 5.553156 5
TCGGT 259570 0.1713374 6.004776 7
TGCCT 232480 0.15996914 5.1070743 4
TAGGC 228465 0.14224724 6.7904916 1
TTGCT 117680 0.10051356 5.57496 4