FastQCFastQC Report
Wed 24 May 2017
HCGTCBCXY_s1_2_illumina12index_12_SL248341.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HCGTCBCXY_s1_2_illumina12index_12_SL248341.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 9542239
Filtered Sequences 0
Sequence length 50-251
%GC 55

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[WARN] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 45335 0.47509813996484473 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 35400 0.37098211436540207 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 34657 0.36319568185202655 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33198 0.3479057692853847 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 31645 0.331630762968733 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 31490 0.3300064062532913 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 31314 0.3281619754022091 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29680 0.31103811170522977 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 28537 0.2990597908939401 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 28397 0.2975926299896702 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 27163 0.28466065459060497 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26077 0.2732796778617681 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24905 0.2609974451488796 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24749 0.2593626087126931 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24123 0.25280230352645744 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23946 0.2509473929546304 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23806 0.2494802320503605 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23685 0.24821218584024146 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23408 0.24530930319393596 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23171 0.2428256093774218 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 22552 0.23633866223639965 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22130 0.23191622008210022 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22029 0.2308577682868769 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 21439 0.22467473304745353 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21057 0.22067147972294554 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20872 0.21873273138516025 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20713 0.21706645578673933 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20631 0.21620711868566697 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20402 0.21380726263511113 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 20065 0.21027559674411844 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19760 0.2070792819169589 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19360 0.20288739361904476 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 18759 0.19658908145142873 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18721 0.19619085206312692 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18140 0.19010213431040662 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17584 0.18427540957630595 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17513 0.18353134940342616 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 17453 0.18290256615873907 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 17369 0.1820222696161771 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 17350 0.18182315492202616 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17230 0.1805655884326519 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 16844 0.17652041622516476 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16603 0.17399480352567148 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 16540 0.17333458111875 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16539 0.17332410139800522 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 16133 0.16906933477562236 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 15894 0.16656468151761866 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 15399 0.1613772197489499 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 15124 0.1584952965441339 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14965 0.15682902094571308 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 14584 0.15283624734194984 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14325 0.15012199966905043 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAG 14098 0.14774310305998414 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 13763 0.14423239661048104 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13672 0.14327874202270557 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 13648 0.14302722872483073 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13598 0.14250324268759146 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 13513 0.1416124664242847 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13509 0.14157054754130557 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13245 0.13880390126468223 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 13208 0.13841615159712517 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12493 0.13092315126460363 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 12013 0.12589288530710663 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 11941 0.1251383454134821 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11915 0.12486587267411767 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11029 0.11558084009423784 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10276 0.10768961037341444 No Hit
TGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 10246 0.10737521875107088 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 10092 0.10576134175637394 No Hit
AGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 10068 0.1055098284584991 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 9740 0.1020724800542095 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 19343625 8.182105 66.24346 35-39
TGGAT 14634825 7.6717353 78.93374 35-39
TATTA 8316835 6.8439937 142.93936 240-247
TCACC 14761115 6.779725 77.23489 160-169
TCTCC 12879265 6.2843738 85.34831 20-24
AGTGG 14976305 6.0792375 40.737793 100-109
TCCCT 12413595 6.0571523 73.19649 15-19
CTGTG 12712530 5.712645 85.60856 25-29
CTGAG 12858960 5.439175 49.529633 15-19
TGGGT 11907895 5.1352005 45.680164 100-109
TGTAT 7555990 5.1151595 66.862045 240-247
TTACT 7156665 5.048488 126.03452 240-247
TTCAC 8582775 4.8853927 74.509415 40-44
CTCTG 10301380 4.8237357 73.02302 35-39
CTCCA 10437125 4.7937326 41.046745 80-89
CCTGA 10847815 4.7813697 51.10639 15-19
ATTAC 7014975 4.657992 119.45474 240-247
ATTCA 6853135 4.550529 111.999565 40-44
AAGGG 11893640 4.544448 39.936695 90-99
TCTGG 10102895 4.53995 134.38162 35-39
TGAGA 8894575 4.3888755 94.17491 15-19
GAAGG 11486410 4.3888493 31.882175 150-159
ACACG 10519625 4.364478 55.623077 230-239
TGGAG 10726655 4.354203 39.39765 90-99
CCAGG 12684965 4.329499 53.33011 80-89
GACAC 10413820 4.3205805 52.409744 230-239
CCCTG 11396480 4.306059 85.08764 10-14
TCAGT 7796385 4.2587504 96.27464 7
ACCAT 7933635 4.250754 70.29489 160-169
GAGAC 10628065 4.2315884 91.09315 8
ACTAC 7867630 4.215389 37.057903 130-139
TACTG 7662195 4.1854496 90.454254 240-247
CAGCC 11652155 4.1441684 55.200817 30-34
CACCA 9569730 4.1372766 59.960545 160-169
TACTA 6217955 4.128765 29.59673 130-139
TCCAG 9351365 4.121783 40.506924 80-89
AGCCT 9277020 4.089014 50.967495 30-34
GGGTC 11746175 4.087333 123.426155 8
CACCT 8810705 4.046724 45.536163 20-24
CTGGG 11260215 3.918233 130.19814 3
GACTC 8865995 3.9078472 51.419323 20-24
AGACT 7561505 3.8879366 68.96217 15-19
GATTC 7115575 3.8868606 58.456245 40-44
TGAAG 7815295 3.8563235 40.94852 150-159
CAAGA 7809425 3.7796535 47.004627 180-189
ACTGG 8887675 3.7593727 44.71073 60-69
GCTGG 10752000 3.7413886 33.07542 90-99
CCTGT 7817165 3.6604743 60.741367 25-29
GAGTG 8963135 3.6383486 39.59929 100-109
ACTGT 6623110 3.617853 78.47794 240-247
ACTCT 6268675 3.5681863 67.61592 20-24
GTATT 5220100 3.533838 76.80548 240-247
TCCTG 7450520 3.4887888 63.177685 20-24
GGATT 6608925 3.4644706 55.890236 40-44
GGACA 8672530 3.452988 31.60599 220-229
CTCCT 7021325 3.4260209 92.22711 20-24
GGTCC 9343940 3.3881013 140.38203 9
TATCT 4716175 3.3269062 52.39372 200-209
AGACA 6863425 3.3218026 39.932903 170-179
AGCTG 7760275 3.2824974 37.19078 60-69
GTCTC 6997360 3.2765913 33.724735 30-34
CTGCA 7429835 3.2748337 46.607452 25-29
CATCT 5720815 3.2563396 33.864704 170-179
CCATC 7069890 3.247174 35.998024 45-49
GTCCC 8579895 3.2418373 73.56714 10-14
CCTCA 7017325 3.2230313 81.44195 5
GGAGT 7826405 3.1769235 37.79474 90-99
AGGGA 8126205 3.1049469 40.805782 80-89
AGTAG 6188995 3.0538538 29.167835 50-59
AAGAA 5303200 2.9941375 40.295933 180-189
GGAAG 7727860 2.9527426 30.686548 80-89
GTGAA 5934130 2.9280949 39.834454 150-159
GGCTG 8325505 2.8970377 34.223137 90-99
ATCTC 5086475 2.8952675 49.702408 170-179
GAGCT 6780430 2.8680353 30.11359 60-69
CAGGG 8740215 2.8627777 36.374065 80-89
ACCTT 4985775 2.837948 71.53563 40-44
GACAA 5819120 2.8163733 25.949196 180-189
GGGAA 7370585 2.8162313 34.36791 80-89
CTATG 5126690 2.8004382 27.615599 50-59
TGTGC 6193120 2.7830098 56.77296 25-29
GAGTC 6368045 2.6936014 29.568972 150-159
CCCTC 6774385 2.667239 27.560276 20-24
ATCAG 5163630 2.655009 28.042187 45-49
CGCCA 7445025 2.647874 39.810314 70-79
ATCTG 4838325 2.6429198 39.026997 200-209
CAGTG 6214420 2.62862 74.549835 8
AGGGC 7912255 2.5915873 33.579666 150-159
GAACA 5353290 2.5909183 38.317577 210-219
GTGTA 4925810 2.5821633 40.741478 230-239
AGGCT 6062280 2.5642672 20.386978 25-29
AGAAC 5291970 2.56124 32.459225 190-199
ATGAA 4268780 2.5604453 30.09279 210-219
TGCAA 4948635 2.544464 37.819176 200-209
CTACA 4733740 2.5362856 20.33884 190-199
CCAAG 6094840 2.528683 40.99233 180-189
GTGGA 6223555 2.5262883 27.874699 100-109
CTGTC 5370695 2.5148873 49.51027 30-34
CTACT 4382805 2.4947321 23.408165 50-59
CACTG 5627370 2.4803648 20.143728 30-34
GCAGC 7181850 2.4512334 34.091236 30-34
CTCTC 4958505 2.419478 95.66556 20-24
CTTCA 4240075 2.4134889 50.835457 45-49
TATGC 4415310 2.411849 21.231686 50-59
GGGCT 6897945 2.4002874 42.307 90-99
TGGTG 5540255 2.3891983 35.03064 35-39
GTGGT 5535540 2.3871648 31.464214 120-129
TATAT 2897985 2.384776 26.943169 240-247
CAGGC 6873195 2.3458865 33.301632 70-79
TCCAA 4370950 2.3419068 45.279587 180-189
GTATC 4270290 2.3326323 24.474173 200-209
CCGCC 7648320 2.3318274 33.745987 70-79
CAGTA 4508980 2.3184044 21.651442 45-49
TATCA 3486475 2.3150434 18.123745 170-179
GCCTC 6105715 2.3069901 71.13259 4
GCTCC 6085920 2.299511 33.48901 80-89
CACGG 6699285 2.2865295 49.416218 230-239
ACAAC 4528230 2.283727 20.991953 180-189
TGAAC 4411985 2.268532 41.2963 210-219
TCTGT 3886710 2.2555327 26.79683 210-219
CCTTC 4586210 2.2378185 54.807266 45-49
ACAGC 5375010 2.2300332 28.9667 210-219
CAAAT 3530675 2.206746 37.593906 200-209
TACAT 3319280 2.2040248 19.018808 190-199
GTAGT 4197485 2.2003675 25.461687 120-129
GCTAT 4020935 2.196423 33.77266 50-59
GTGGG 6522725 2.17816 29.891022 100-109
GGGGG 8355690 2.1606345 92.82989 5
TGCAG 5103855 2.1588652 43.10408 30-34
ACGGC 6324825 2.1587226 54.65988 230-239
CTCAC 4668930 2.144422 56.794266 20-24
AACTA 3427990 2.1425657 38.718807 130-139
CCTCT 4384030 2.1391656 48.032925 35-39
TGCAC 4820465 2.1247067 27.391012 25-29
AATGA 3535090 2.120373 28.364946 210-219
GCAGA 5320080 2.118202 25.144022 140-149
TCTAT 2994305 2.1122568 20.960354 110-119
GGCCG 7515360 2.1101553 27.295534 230-239
AAATG 3517770 2.1099844 35.55387 200-209
AGAGT 4271200 2.1075506 32.198776 150-159
AGCAC 4966580 2.06058 21.49973 130-139
GCCTG 5666555 2.054686 32.771008 210-219
GGCTC 5661500 2.052853 20.474691 40-44
TCCGC 5397065 2.0392332 41.699745 70-79
TGGTA 3885460 2.0368006 31.583858 120-129
ATATC 3065575 2.0355632 14.418504 160-169
TTCAG 3721545 2.0328825 47.37347 45-49
CAGAG 5077675 2.0216875 33.575657 170-179
GGATC 4750370 2.0093455 18.670078 70-79
TCTCT 3317300 2.0060167 33.24544 35-39
CATAT 3008640 1.9977577 15.248907 160-169
GGTCT 4443200 1.9966462 35.55099 15-19
ATGGA 4038875 1.9929137 12.522226 100-109
GCCAG 5805840 1.981588 35.508144 70-79
GGTGG 5909200 1.9732829 18.58427 40-44
ACCCT 4267820 1.9601938 45.103783 10-14
TCCAT 3437845 1.9568523 27.660307 45-49
GCTGT 4320880 1.941679 21.837702 230-239
CAGAC 4664125 1.9350945 27.285528 140-149
ACTAT 2912830 1.9341393 17.677935 130-139
AACAG 3990360 1.931279 36.519783 210-219
CCTGC 5111340 1.9312745 49.811714 20-24
GTCAC 4375785 1.928706 39.77032 160-169
TGAGC 4553155 1.9259262 18.839912 200-209
GATGG 4741660 1.9247522 21.307884 100-109
CCAGA 4623590 1.9182773 35.219814 170-179
TGGGG 5735900 1.9154122 121.16554 4
TGGGA 4718425 1.9153204 16.947495 100-109
ACCAG 4608105 1.9118526 14.909972 190-199
GCACA 4607595 1.9116408 18.927004 130-139
TGTGA 3620550 1.897932 20.65188 210-219
TCAGC 4289365 1.8906149 11.902965 45-49
TGTCT 3236670 1.8783019 50.75767 30-34
CAGTT 3419695 1.8679975 26.263765 190-199
CTATT 2632865 1.857288 20.10601 110-119
AGAGA 3998730 1.8572576 29.313604 170-179
CTGTA 3395830 1.8549614 25.40963 190-199
TTCCA 3253740 1.8520582 23.70187 180-189
CAAGG 4639685 1.8473014 17.348286 80-89
AGTCA 3582555 1.8420602 30.783829 160-169
TAGTG 3509645 1.8397943 26.880032 120-129
ATACT 2767565 1.8376825 27.469318 130-139
TACAA 2935820 1.834949 18.984762 130-139
ACCTG 4142855 1.826038 31.597961 25-29
CACAG 4388185 1.8206103 16.473566 140-149
TAGTA 2845195 1.8130168 17.349768 120-129
CCGTG 4956860 1.7973515 21.983358 230-239
AGCTA 3467205 1.7827501 25.926609 50-59
CATGA 3446965 1.772343 23.346054 60-69
CCTGG 4856665 1.7610209 34.324932 2
AGTTC 3206365 1.7514669 23.26664 190-199
GTGCA 4136575 1.7497182 50.10038 25-29
ATTGG 3336955 1.7492683 21.481577 100-109
CTCAG 3957515 1.744346 77.78187 6
ATGCA 3391980 1.7440711 16.499954 60-69
TTCTG 2995850 1.7385494 42.550644 30-34
GGATG 4269075 1.7329186 22.734642 100-109
GGAGC 5218385 1.7092346 13.83137 200-209
GCTGA 4035215 1.7068442 28.54408 200-209
GCCGA 4994395 1.7046342 20.861807 220-229
GCAAA 3475090 1.6818951 34.245255 200-209
AGGAC 4167610 1.6593434 22.836325 220-229
CAGCT 3763330 1.6587554 13.003218 50-59
TCTCA 2912730 1.6579522 26.626158 100-109
TGACC 3731420 1.6446905 15.4711275 210-219
AGGGG 5231570 1.6444275 32.806194 90-99
CTGAA 3195850 1.643226 24.909353 200-209
AACAC 3255175 1.6416858 23.977375 190-199
GCACT 3715960 1.6378763 26.443993 25-29
CGATT 2977485 1.6264417 36.06122 160-169
AGTTA 2550730 1.6253778 16.351194 50-59
GGGGC 6029465 1.624653 28.522581 90-99
GGGCC 5721150 1.6063789 27.855118 2
GAGGA 4156600 1.588198 29.792086 220-229
GGCTT 3521835 1.5826112 21.302792 25-29
CGTCC 4176895 1.5782027 20.106037 180-189
AGTGA 3188610 1.5733651 86.66684 9
ACAAT 2493860 1.5587149 24.367895 180-189
CATCA 2897090 1.5522288 32.46822 45-49
CTGGT 3452985 1.551672 32.132557 35-39
CCATG 3511200 1.5476246 16.241962 160-169
GTCCG 4251220 1.5414872 33.800224 70-79
GTTAC 2817860 1.5392472 16.340628 50-59
GTTCT 2641550 1.5329422 24.327723 190-199
CTCCC 3880990 1.5280395 14.435175 190-199
CTTTA 2162635 1.5255761 41.82417 45-49
TCTGC 3246420 1.5201722 35.19246 200-209
TTAGT 2236355 1.5139396 25.694298 110-119
TTCTC 2491185 1.5064536 22.993143 190-199
TACGC 3398545 1.4979699 25.157856 140-149
GAGCA 3758515 1.4964615 8.019438 200-209
CTCAA 2755620 1.4764308 19.736233 150-159
AAGAG 3163430 1.4692926 20.209587 150-159
TCTGA 2669745 1.4583399 23.576904 220-229
ACTCC 3174385 1.4579831 17.406628 140-149
TAGCA 2825155 1.452624 11.9602375 130-139
GGCAG 4418055 1.4470936 13.933586 150-159
GCCGT 3985795 1.4452444 32.25134 230-239
AACCC 3332390 1.4406905 21.375008 140-149
CAACC 3323880 1.4370115 16.169868 140-149
CAACT 2670645 1.430902 18.512833 130-139
GTCCA 3234885 1.4258338 30.510468 180-189
CTACG 3225495 1.421695 16.659433 130-139
GGGGT 4206020 1.4045333 115.91724 7
ATCTA 2103755 1.3969078 21.796696 110-119
ATACA 2215095 1.3844808 22.476288 35-39
TGTCC 2948640 1.3807334 55.263435 15-19
TCAAG 2665870 1.3707235 24.621801 150-159
GGCCT 3763500 1.3646406 68.16576 3
AGCAG 3407215 1.3565906 12.866872 50-59
TGGAA 2748785 1.3563409 19.74389 120-129
GTGGC 3897175 1.3561054 14.727759 40-44
AAGCT 2629245 1.351892 17.995955 200-209
TTACA 2035650 1.3516856 10.194685 120-129
CCATA 2522470 1.3515115 15.534322 160-169
GAACT 2621490 1.3479046 15.399661 190-199
GTGAC 3186575 1.3478804 16.472185 210-219
CACGT 3055685 1.3468482 17.750128 180-189
AGACC 3209590 1.331624 104.795105 9
ACAGT 2587925 1.3306463 12.872997 120-129
ATCAT 2000435 1.3283026 16.467163 110-119
ATCCG 2998945 1.321839 24.552835 70-79
CCTTT 2185045 1.3213266 47.205162 45-49
GATTG 2516620 1.31924 24.883888 100-109
CAATT 1983475 1.3170413 25.237398 180-189
ACAGA 2712000 1.3125705 21.02182 140-149
CGACA 3143200 1.3040793 16.437578 70-79
TCCGT 2780560 1.3020282 14.008212 150-159
TCGGA 3054955 1.2922068 96.94699 5
ACATA 2067035 1.2919403 21.543472 130-139
TCACT 2264250 1.2888315 14.010982 190-199
CGGCC 4388800 1.2840835 34.184082 230-239
AATTC 1933425 1.2838076 25.165703 180-189
CCAGT 2909910 1.2825953 20.1354 190-199
GTGCG 3683695 1.2818205 19.689667 240-247
AACCA 2539540 1.2807689 18.736845 190-199
CCTAC 2761415 1.2683076 17.785229 190-199
ACATG 2465030 1.2674567 14.868894 190-199
AGTCG 2995170 1.2669187 16.961681 150-159
TGCGA 2985680 1.2629044 16.788134 240-247
CTTCT 2087670 1.2624426 23.085283 30-34
ACGTC 2849755 1.2560809 19.562723 180-189
GATCC 2842295 1.2527928 24.368998 70-79
CTTCG 2658170 1.2447176 108.13567 3
CGTGT 2755850 1.2383996 26.199913 230-239
TACCA 2310745 1.2380717 11.078623 45-49
TGGAC 2915950 1.2334095 15.973757 80-89
GTCGA 2887300 1.221291 13.310932 150-159
TGAGT 2318600 1.2154355 21.112696 90-99
GAGAG 3179490 1.2148533 28.586609 220-229
ATTAT 1475785 1.2144358 9.603624 50-59
ATTAG 1882130 1.199332 25.644287 110-119
AAGGC 3001995 1.1952511 29.056364 25-29
ACGCA 2878915 1.1944304 21.677631 140-149
GAAGT 2417920 1.1930813 14.105894 140-149
AAAAA 1728755 1.1864539 9.5024 90-99
ACACA 2349015 1.1846812 7.907057 130-139
AGAGC 2963390 1.1798805 27.271156 220-229
GGACT 2788205 1.1793752 13.435104 90-99
TTCGG 2623430 1.1788939 103.78838 4
TCGAG 2766875 1.1703527 12.922685 150-159
TTGGG 2712560 1.1697735 15.74365 100-109
GCAAG 2927975 1.1657797 17.107687 25-29
AGGTC 2741830 1.1597589 18.146395 10-14
GGGTG 3462820 1.1563535 14.400695 60-69
AGGCC 3369870 1.1501687 14.369666 2
GACCC 3228355 1.1481866 44.209393 10-14
GATCT 2098240 1.146157 10.492791 220-229
AGATC 2223815 1.14343 13.358776 210-219
GCTTC 2441825 1.1434116 28.853254 2
GCCCC 3725830 1.1359347 12.355194 80-89
CGCTG 3132495 1.1358389 12.9375925 190-199
TTATT 1293715 1.1310145 19.910835 240-247
ATATT 1370415 1.1277261 28.679197 240-247
GAACC 2712010 1.1251835 11.2043705 180-189
GCACC 3158515 1.1233474 11.673689 130-139
ACAAG 2317285 1.1215339 17.831291 80-89
ATTCC 1969015 1.1207811 23.276817 180-189
TAGAC 2178495 1.1201274 18.52007 170-179
CGGCT 3088865 1.1200187 23.637482 230-239
TGTGT 2007970 1.1182563 16.111422 240-247
CCGAT 2531675 1.1158813 24.206503 160-169
CTTGA 2037675 1.1130736 22.398205 90-99
TTGAG 2111955 1.1071099 20.87343 90-99
ATGGG 2710685 1.1003312 20.214392 100-109
ATCAA 1758745 1.0992525 13.089476 110-119
CCCCT 2786445 1.0970905 9.937459 140-149
AGCTC 2486360 1.095908 13.41944 210-219
TACAG 2123850 1.0920304 9.606393 120-129
CGCAG 3193065 1.0898232 16.880983 140-149
GGAGA 2843735 1.0865645 87.30176 7
GTAGA 2201300 1.0861938 18.284668 170-179
ATGGT 2061870 1.0808548 9.894437 35-39
TGGCT 2404355 1.0804479 31.985401 40-44
CAGCA 2603100 1.0799978 12.836728 45-49
CACAT 2014660 1.0794326 14.111212 130-139
CTATA 1613120 1.0711228 13.296258 50-59
GAAGC 2683340 1.068378 14.102721 200-209
TAGTT 1565120 1.0595354 15.066023 50-59
ATGAG 2136715 1.0543255 20.067247 60-69
CTCCG 2777140 1.0493177 9.999336 140-149
GTAGC 2464280 1.0423589 11.194842 50-59
GGGAG 3308900 1.040079 14.721399 5
CGTGA 2445615 1.0344638 21.037487 150-159
GTATA 1622185 1.0336896 11.13786 240-247
AAGGT 2091385 1.0319582 20.994696 15-19
AAACT 1648310 1.0302284 17.701431 130-139
GACAG 2572095 1.0240856 15.817185 70-79
TTTCA 1442750 1.0177513 7.4633164 100-109
CGAGT 2403730 1.016747 15.830254 160-169
ACCAA 2000320 1.0088235 18.018124 130-139
TTATA 1224880 1.0079641 13.685268 110-119
ACACC 2317885 1.0020901 13.219429 40-44
ACTCA 1866220 0.99990004 13.039573 190-199
GATAC 1943720 0.9994122 24.13307 35-39
TTTAG 1473205 0.9973119 29.624949 45-49
ATGAT 1560025 0.99408 9.22165 120-129
CCAAC 2272145 0.98231536 14.80507 130-139
CCGTC 2577060 0.97371924 10.694409 140-149
GCCAA 2346460 0.97352064 15.349645 180-189
GGGAC 2960570 0.96970767 10.309392 90-99
GCAGT 2285225 0.96662086 6.4480724 50-59
TCATA 1454345 0.96569514 9.310321 110-119
AGCCC 2711705 0.9644364 11.763068 80-89
ATGAC 1869615 0.96130913 11.2813 160-169
CATAC 1793720 0.9610553 14.392691 130-139
TATGG 1826845 0.9576521 12.611715 35-39
GCTCT 2044160 0.95720065 18.84695 210-219
CAGAA 1968335 0.95264673 18.915691 140-149
AATCA 1522140 0.95136946 14.806745 110-119
ACAGG 2389365 0.95133126 15.37212 70-79
AACTC 1774245 0.95062083 17.119043 190-199
GCCAT 2127310 0.9376502 7.585611 60-69
CCCAG 2630305 0.93548596 15.063492 80-89
TACAC 1743715 0.9342631 22.104906 35-39
AAGTT 1466120 0.93424183 18.265326 140-149
TAACA 1493760 0.93363136 9.038525 120-129
GGTAT 1777520 0.9317954 9.29416 110-119
TGGTT 1671085 0.93064207 9.434646 50-59
AACTG 1807380 0.92930955 11.722386 60-69
CCCCA 2480060 0.91912836 17.209505 80-89
GAGCC 2668485 0.91077924 19.76631 220-229
CGGAG 2772420 0.9080809 74.930916 6
ACCGC 2552060 0.90765756 12.062177 220-229
TCCTT 1488645 0.900204 10.771672 1
TGAGG 2210140 0.89714813 12.974859 220-229
GTTAT 1310785 0.88735884 11.027331 110-119
ATAGT 1391950 0.88697916 16.307896 120-129
GACTG 2086815 0.8826961 13.102531 90-99
AGCCG 2577345 0.8796723 20.743158 220-229
AGAAG 1893720 0.87956077 16.557575 140-149
CGAGG 2677560 0.87701035 15.924845 220-229
CGTAT 1596130 0.87188095 8.148589 240-247
GATCA 1695430 0.87174773 9.600161 110-119
GGTAG 2146265 0.87121975 12.151408 120-129
CATTA 1296360 0.860792 12.560597 110-119
ACGCT 1951875 0.8603241 16.073973 190-199
TCTTC 1418155 0.85757774 48.4555 2
CGGAC 2503120 0.8543385 11.663845 220-229
GTTTC 1469565 0.8528168 5.1201224 100-109
CTATC 1490630 0.84848005 8.4653 110-119
GATGA 1714715 0.8460968 6.5815763 60-69
GCTTG 1871800 0.841133 16.995506 90-99
GGTTC 1867815 0.83934224 11.5060425 160-169
TGGCA 1979780 0.8374216 5.7783985 100-109
GGTGC 2398865 0.8347364 11.532427 60-69
GAGAT 1691445 0.83461463 12.811516 210-219
TTACC 1465995 0.8344576 10.021319 45-49
ATCCA 1555185 0.83325094 10.086363 180-189
CCGAG 2435830 0.8313718 19.371737 220-229
TCATC 1455575 0.82852644 10.711404 110-119
AGTCT 1513370 0.8266736 16.124714 8
GCCTA 1861290 0.8203971 17.195587 190-199
TTTAT 933770 0.8163369 10.778916 240-247
ATATG 1280835 0.8161745 5.716746 50-59
GTCTG 1807505 0.8122407 15.839324 3
TTATG 1187055 0.8035977 11.198773 50-59
CATGG 1899475 0.80345356 9.179065 200-209
GTCTA 1470130 0.80305386 10.297746 30-34
ACATC 1468370 0.7867364 6.0279727 110-119
TATAC 1182550 0.78522134 9.226328 130-139
TGATG 1497610 0.7850635 12.094413 120-129
CCTCC 1985050 0.7815621 10.897698 140-149
ACAAA 1324805 0.7794146 13.2855625 130-139
ATATA 1004900 0.7783884 11.0487175 130-139
GGTTA 1474800 0.7731063 8.454091 50-59
CCAGC 2171995 0.7724849 6.4048696 80-89
GTTCA 1399845 0.7646609 14.110685 160-169
GGGAT 1854700 0.7528666 13.4084635 100-109
TATTT 851450 0.7443697 9.673421 240-247
TTGGA 1413225 0.74082804 6.5024743 60-69
TCAAC 1380495 0.7396539 7.7757072 110-119
ATGCC 1666000 0.7343195 8.082013 50-59
ATCTT 1034410 0.72969836 13.774722 3
TCCGG 2007585 0.7279479 11.764748 70-79
GGATA 1470210 0.7254499 15.701078 35-39
AACGC 1727090 0.7165509 15.211067 180-189
TGCCA 1623970 0.715794 7.271856 60-69
CATCC 1557465 0.7153379 6.7852445 110-119
ATAAA 968905 0.7064423 8.127227 130-139
TATAG 1104005 0.70349467 6.5681276 120-129
GAAAT 1164160 0.6982717 7.65506 110-119
GGGCA 2130240 0.6977407 13.94338 150-159
GATTA 1092250 0.6960042 5.643798 50-59
CAACG 1674650 0.69479406 15.4552555 180-189
CCCCC 2177120 0.6916645 13.372994 80-89
TTTAC 977075 0.6892528 13.600098 45-49
CAAAC 1360365 0.6860743 14.221544 130-139
AATAC 1094825 0.6842886 11.633997 130-139
ACGCC 1920435 0.6830158 13.497027 180-189
GACCA 1642880 0.681613 6.3871064 170-179
CACAA 1338875 0.6752362 8.616508 130-139
AGGCA 1690695 0.6731541 6.6089153 80-89
CGCCG 2262630 0.6620046 11.848659 220-229
GCGAC 1936855 0.6610669 7.17643 70-79
CCCGT 1740335 0.65757006 10.429291 140-149
TATTG 971325 0.65755546 6.0876875 240-247
CTGAC 1486050 0.6550033 10.048055 220-229
GCGGA 1994270 0.6532049 9.687749 220-229
GACCG 1909605 0.6517663 10.161129 210-219
ACTTC 1128630 0.6424264 30.470636 4
TCAAT 961525 0.63845927 8.783959 110-119
CAGTC 1444100 0.6365131 5.6914997 210-219
AAATA 872485 0.63614106 12.891031 130-139
AGATG 1260820 0.6221301 5.774167 120-129
TTTCT 818880 0.6136898 8.995956 4
CACGC 1722130 0.6124873 12.990243 190-199
AAGCA 1262705 0.6111317 6.260852 120-129
CCCTA 1328890 0.61035424 12.150868 110-119
AATAA 835640 0.6092769 7.5724506 130-139
AGTAA 1013115 0.6076738 5.2976737 50-59
TCCAC 1318155 0.6054237 10.607926 180-189
TAGCT 1106850 0.6046133 12.228937 50-59
GGTGA 1455930 0.59099644 6.579495 120-129
ACCTA 1101815 0.5903403 7.3704853 130-139
AATGG 1195265 0.5897831 6.7303925 120-129
CCGGC 2009215 0.58786 9.466915 70-79
GGCCC 2000890 0.58542424 10.193021 70-79
CACGA 1403175 0.582162 9.135893 180-189
CACCG 1631170 0.5801368 9.073141 45-49
CCGTA 1314640 0.57945126 7.108179 230-239
ATTAA 743065 0.5755728 6.410143 110-119
TGATT 849200 0.5748808 6.0045905 50-59
GTCCT 1221035 0.5717632 6.3184414 45-49
GTTCC 1220900 0.5717 6.846265 140-149
GCCGC 1950965 0.57081705 12.937751 220-229
TTAGC 1041705 0.5690281 9.480945 45-49
GACGA 1399055 0.557037 10.219053 220-229
CGGCA 1624050 0.5543036 11.037986 70-79
GAAGA 1192055 0.5536641 6.5815225 15-19
TCAGG 1308080 0.5533011 5.490953 150-159
GGGGA 1745680 0.54871565 9.444418 4
AAGAT 913135 0.54770505 5.9836392 15-19
GCTAC 1239860 0.5464906 8.002379 50-59
ACCCG 1531795 0.54479337 9.129925 140-149
CGGTT 1209695 0.5436021 11.373892 160-169
CTTTG 928550 0.53885543 7.0928946 45-49
TAATA 695180 0.5384815 8.195596 130-139
CCTAT 930640 0.52972865 5.232113 110-119
TACTT 747665 0.52742136 11.670636 1
AAATC 842050 0.52629894 8.228973 110-119
TTCAA 790945 0.525193 5.6567063 200-209
ACATT 758085 0.50337374 6.3911977 110-119
CTGCG 1378005 0.49966297 11.909341 25-29
AAGTA 830530 0.49815798 5.0111585 120-129
ACCCC 1342975 0.49771643 9.308623 140-149
ATTTC 702690 0.49569488 6.1244345 240-247
AGTTT 731550 0.49523556 5.0454597 140-149
GTAAC 958945 0.49306548 7.0525985 120-129
GGAGG 1568065 0.49288633 5.367672 6
CCACG 1372535 0.48815146 7.9402494 180-189
GGGTT 1126100 0.48562315 5.7046185 100-109
ACGAC 1169765 0.4853227 9.604218 220-229
TATGT 705075 0.47731286 6.5798435 140-149
TATCC 834965 0.47526962 5.606339 110-119
GGGTA 1167860 0.47406203 5.3917303 100-109
TGGCC 1296915 0.47025982 14.721081 2
AGTAT 732335 0.46665892 5.372112 110-119
ATGCT 846765 0.4625427 7.076829 50-59
CAATC 860280 0.4609285 6.609253 110-119
TGCTA 827635 0.452093 6.368389 50-59
CCGGT 1242890 0.45067042 8.892418 160-169
CATAA 717900 0.44870254 5.982805 110-119
TAAAT 576115 0.44625458 8.067392 130-139
GGTTT 790770 0.44038683 5.340029 100-109
AACAT 697650 0.43604589 5.8847117 110-119
TGCGC 1197140 0.43408152 8.915091 25-29
TTGGT 766985 0.42714074 5.204396 120-129
ATTCT 603485 0.4257132 7.3856173 2
CGCGG 1494550 0.41963828 6.875503 220-229
GCGCT 1153295 0.4181834 8.150072 25-29
GGTCA 988490 0.4181186 5.5027857 160-169
TGACG 978130 0.41373646 9.102328 220-229
GCATG 972190 0.41122392 8.113435 60-69
CTAAC 756960 0.40557078 5.578221 110-119
CACTT 694450 0.3952872 6.834611 3
ATGGC 931355 0.39395124 7.156655 1
AGCTT 716595 0.3914378 7.6290407 1
CCTAA 727885 0.38999274 7.7719407 110-119
GGTAA 790090 0.38985637 7.380521 120-129
GCCTT 828155 0.3877928 8.82758 1
CATGC 874700 0.38553977 6.8726106 60-69
CAATG 748130 0.38466972 5.0517025 120-129
CCGCG 1309105 0.38302046 7.158267 220-229
ACGAG 957615 0.38127655 8.1247015 180-189
CCGGG 1275230 0.35805783 5.084504 80-89
TTTGA 527905 0.35737452 5.866232 45-49
GAGGC 1051525 0.34441745 5.8557053 35-39
TTCTT 455080 0.34104872 20.244728 1
TGGGC 960260 0.334143 9.502011 1
CGAGC 941480 0.32133603 6.8241587 180-189
CTCGG 870635 0.3156912 5.084986 6
TGCTG 696405 0.31294435 13.40028 1
GCTTT 510275 0.2961224 5.0322113 45-49
CGCTT 630650 0.29530886 5.865773 1
AACTT 442180 0.2936106 11.022334 3
GACTT 524550 0.2865338 6.8199763 1
AACCT 526855 0.2822831 5.433464 2
CTCTT 465605 0.2815577 9.547904 1
TCACA 508645 0.27252635 5.598086 5
GCGAG 798570 0.2615643 6.1218452 240-247
TCGGT 579815 0.26055217 5.9411306 7
TTGGC 564900 0.2538498 7.13357 1
GAGGT 614660 0.24950507 6.817124 7
TTCCT 401585 0.24284394 6.320817 4
TAACT 364930 0.24231607 7.157986 2
GTCTT 408495 0.23705749 11.946328 1
TGTAA 363035 0.23133337 8.160001 25-29
CCCTT 471755 0.23019052 5.5583463 3
AATCT 340985 0.22641642 7.2315035 2
ATTGT 328455 0.22235335 5.1296544 240-247
CGGGG 815690 0.21978952 9.131505 3
CCTCG 568640 0.21485558 5.664366 5
TGCTT 367730 0.21340078 11.789562 1
TGCCT 383295 0.17948215 5.010108 4
TCGCA 397325 0.17512815 6.7261763 7
TAGGC 345495 0.14613996 6.649302 1
TTGCT 183090 0.106250644 5.6582303 4