FastQCFastQC Report
Sat 8 Jul 2017
HNCHNBCXY_s1_2_illumina12index_7_SL254634.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HNCHNBCXY_s1_2_illumina12index_7_SL254634.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 11972662
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[OK] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 47684 0.39827400122044704 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 31972 0.2670416988302184 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31854 0.2660561201844669 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 31638 0.2642520101210574 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31066 0.25947445939758423 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30722 0.2566012470743766 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 30447 0.2543043476880914 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29986 0.250453909080537 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 29694 0.24801501955037233 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26086 0.21787969960231066 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 26052 0.2175957193145518 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25353 0.21175741869268505 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 25202 0.2104962121205794 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 24921 0.20814919856586614 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 24380 0.20363057104593785 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24209 0.2022023172457387 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23724 0.19815142196447205 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23678 0.1977672133398571 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23629 0.19735794763102807 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 23586 0.19699879609062715 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23503 0.19630555009403924 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23488 0.19618026467296915 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23449 0.1958545225781869 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 23334 0.19489400101664944 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 23190 0.19369126097437647 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22350 0.18667527739445078 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 22297 0.1862326022400031 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21838 0.182398868355258 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21367 0.17846490613365684 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 21336 0.17820598293011194 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21242 0.17742086095807266 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21165 0.1767777291299128 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 21000 0.1753995894981417 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20597 0.1720335878520583 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 20542 0.17157420797480125 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20530 0.1714739796379452 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 19764 0.16507607080196535 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 19560 0.16337218907541196 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 19421 0.16221121084016235 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 18267 0.15257258577916924 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18059 0.15083529460699718 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 18016 0.1504761430665962 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 17989 0.15025062930867003 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 17689 0.147744920887268 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16852 0.14075399439155636 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 16802 0.1403363763213227 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 16370 0.13672815619450376 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 15880 0.1326354991062138 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 15143 0.12647980875096948 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 14900 0.12445018492963386 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 14434 0.12055798451505605 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 14332 0.11970604365177936 No Hit
AAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 13062 0.10909854466784412 No Hit
TAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 12169 0.10163988593347077 No Hit
TGGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 12130 0.10131414383868852 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 23892880 7.608872 67.66024 35-39
TATTA 12471480 7.270008 130.8529 240-247
TGGAT 18669660 7.2646165 83.20953 35-39
TCACC 19232445 6.4283156 73.435974 160-169
TCTCC 17050980 5.961168 87.286896 20-24
TCCCT 17032780 5.954806 72.92697 10-14
CTGTG 17415870 5.8011794 88.21026 25-29
AGTGG 17912175 5.5679407 44.805614 100-109
TTACT 10589590 5.2843413 102.84097 240-247
CTGAG 16290295 5.18777 56.092518 15-19
CCTGA 15130855 4.936518 57.670124 15-19
ATTAC 10184805 4.8589807 103.624626 240-247
CTCTG 14225815 4.854603 81.095215 35-39
TGTAT 9927825 4.8357115 54.70108 240-247
TGGGT 14789280 4.808533 44.873577 100-109
GACAC 15394105 4.8016706 51.938698 230-239
CTCCA 14305275 4.7814426 42.249775 80-89
ACACG 14954035 4.664406 55.70781 230-239
GAGAC 15171625 4.6191764 93.91522 8
AAGGG 15445685 4.5902267 46.963627 90-99
TGAGA 12172825 4.528437 101.1972 15-19
TTCAC 10970565 4.480394 71.684586 40-44
ATTCA 9248920 4.412487 110.32655 40-44
TACTG 11010390 4.3891907 74.41481 240-247
GAAGG 14560850 4.3272667 38.520206 90-99
CCCTG 15293695 4.2713437 93.16171 10-14
TCTGG 12684995 4.2253375 142.91197 35-39
CCAGG 16198235 4.221774 56.57888 80-89
GGGTC 15810490 4.207135 129.66039 8
TGGAG 12989520 4.03775 40.736435 90-99
ACCAT 10306270 4.024106 67.3544 160-169
ACTGG 12633165 4.023129 48.73972 60-69
CTGGG 15050495 4.0049024 136.308 5
CACCA 12453510 3.9795613 58.087193 160-169
CAAGA 10911600 3.9758642 48.111595 180-189
TCCAG 12182815 3.974705 42.739204 80-89
GACTC 12160225 3.9673345 57.780052 20-24
TACTA 8299960 3.9597554 30.49236 130-139
CAGCC 14788730 3.9487863 54.23659 30-34
AGACT 10214690 3.893029 77.876144 15-19
AGCCT 11811875 3.8536837 52.313656 30-34
ACTAC 9735460 3.801232 29.934948 130-139
TCAGT 9493900 3.7846558 61.125145 7
GATTC 9455310 3.7692723 61.473648 40-44
AGACA 10326920 3.762824 37.987183 170-179
CACCT 10878690 3.6361294 43.28487 20-24
ACTGT 9081625 3.6203063 59.293243 240-247
TGAAG 9697745 3.6076775 41.130356 150-159
ACTCT 8780965 3.5861585 73.892815 20-24
CCTGT 10481635 3.5768905 64.6855 25-29
GCTGG 13185930 3.5087454 35.973183 90-99
GGATT 8860400 3.447701 60.0256 40-44
GAGTG 11059510 3.4378123 43.740757 100-109
GGAGT 10831320 3.3668802 39.106346 90-99
TATCT 6741960 3.3643246 46.036644 200-209
GGTCC 12336175 3.3630018 137.71046 9
GGCTG 12619790 3.358097 37.922253 90-99
GTCCC 11930110 3.331935 78.34445 10-14
GTATT 6827360 3.3255162 60.952347 240-247
GGACA 10879150 3.312283 25.273527 220-229
AGGGA 10862575 3.228195 44.36772 80-89
AAGAA 7477830 3.1829064 38.352783 180-189
CCTCA 9505440 3.1771297 51.539116 5
TCCTG 9260145 3.160053 62.831593 25-29
GTCTC 9112135 3.109544 36.447723 30-34
CTGCA 9394145 3.0648873 48.008408 25-29
CCATC 9133160 3.0526977 39.693066 45-49
CTCCT 8685335 3.0364676 94.586975 20-24
GGAAG 10168435 3.0219069 33.769985 80-89
CATCT 7148825 2.9195902 33.249916 170-179
ATGAA 6440585 2.8674307 29.251352 210-219
AGTAG 7646285 2.8445098 30.49761 50-59
GGGAA 9544640 2.8365242 37.160915 80-89
CAGGG 11052530 2.811794 40.17577 80-89
GACAA 7573020 2.7593844 28.71543 180-189
ATCTC 6696935 2.7350376 47.576786 170-179
CCCTC 9556875 2.7344716 33.60058 20-24
GAGTC 8536230 2.7184281 29.576433 160-169
CGCCA 10149770 2.7101223 42.517757 70-79
GAACA 7392070 2.6934516 35.551105 210-219
CCAAG 8588855 2.679003 41.988255 180-189
CTGTC 7764595 2.6496918 50.899563 30-34
TGTGC 7916200 2.6368647 58.77154 25-29
CACGG 10114105 2.6360567 49.680626 230-239
GTGAA 7062610 2.6273756 39.29843 150-159
CCGCC 11327800 2.5892448 36.10783 70-79
AGAAC 7104380 2.588626 33.122208 190-199
ACGGC 9830365 2.5621052 52.929256 230-239
TCTGT 6067030 2.5297475 25.716726 210-219
CACTG 7667190 2.5014596 22.411104 30-34
TATAT 4285825 2.498339 27.460388 240-247
GGGGG 11947390 2.4790127 105.39703 7
GTGGA 7967235 2.4765887 29.228323 100-109
AGCTG 7764690 2.4727254 28.291574 60-69
GGGCT 9264125 2.4651625 44.74665 90-99
TGAAC 6411100 2.4434023 37.81805 210-219
CTACT 5963215 2.4353852 22.399559 60-69
ATCTG 6018545 2.3992374 34.79881 200-209
GTGTA 6162670 2.397978 26.695705 230-239
TCTAT 4800655 2.3955884 19.638897 110-119
ACAAC 6405580 2.3911514 21.96232 180-189
ACCTT 5846335 2.3876517 53.3396 40-44
AGGCT 7453590 2.3736532 22.221817 80-89
TGCAA 6207250 2.365711 36.161987 200-209
CAAAT 5164890 2.355777 37.820698 200-209
CTCTC 6701095 2.34276 99.149826 20-24
TCCAA 5970670 2.3312614 43.13031 180-189
AAATG 5235680 2.3309915 37.36994 200-209
AATGA 5235105 2.3307354 28.220259 210-219
CAGTG 7279140 2.3180985 48.741093 8
CTACA 5842895 2.281371 14.650447 140-149
AGGGC 8886860 2.2608416 32.37471 150-159
CTCAC 6677315 2.2318475 60.59371 20-24
GAGCT 6989335 2.2258077 25.013926 60-69
GGCCG 10192485 2.2197123 22.268208 230-239
GTATC 5567795 2.2195504 21.854687 200-209
CTATG 5550400 2.2126157 20.062788 50-59
GCAGC 8452630 2.2030232 37.056965 30-34
GTGGG 8476500 2.20167 31.606112 100-109
GTAGT 5629675 2.1905825 23.416332 120-129
CAGGC 8396945 2.1885104 32.398975 70-79
TGCAG 6806230 2.1674964 46.964443 30-34
CTATT 4342515 2.1669707 17.51428 110-119
GCTCC 7753800 2.1655421 34.60718 80-89
TGGGG 8294120 2.1542988 130.3995 6
CAGTA 5632040 2.1464865 22.658688 50-59
TGGTG 6569060 2.135841 35.028336 35-39
GCCTC 7641990 2.134315 47.08898 30-34
TGTGA 5470925 2.128811 20.571323 210-219
ACAGC 6819085 2.126983 26.808405 210-219
CTTCA 5192065 2.1204464 49.225956 45-49
TCTCT 4945730 2.1126955 39.838417 35-39
ATCAG 5536465 2.1100607 27.632736 45-49
AGAGA 5924070 2.1069674 33.104553 170-179
GGCTC 7668220 2.0904565 19.374899 80-89
GCTGT 6273325 2.0896273 20.972738 230-239
CCTCT 5932240 2.073962 49.678276 35-39
TCCGC 7425210 2.073771 43.798306 70-79
CATAT 4320470 2.0612154 15.056215 170-179
TGTCT 4940755 2.0601287 50.1394 30-34
CAGAG 6740670 2.052275 36.08911 170-179
ATATC 4261045 2.032865 16.033253 170-179
CCAGA 6498300 2.026925 36.865997 170-179
CCTTC 5782185 2.0215013 51.558853 45-49
GCCAG 7750160 2.0199373 37.688496 70-79
GCAGA 6623685 2.0166576 23.753105 140-149
GCCTG 7391075 2.0149033 27.97743 210-219
CAGAC 6435805 2.0074317 25.286875 140-149
TCCAT 4902890 2.0023472 33.126064 45-49
GCCGA 7681640 2.0020788 20.677526 220-229
ACTAT 4160060 1.9846869 15.901509 50-59
AACAG 5440495 1.9823554 34.046425 210-219
AGAGT 5316750 1.9778948 28.031595 150-159
TGACC 6024375 1.9654826 15.865236 210-219
ACCTG 6004435 1.9589773 37.548172 25-29
TAGTA 4169750 1.9417664 17.807709 120-129
TACAA 4223870 1.9265647 18.37941 140-149
ATGGA 5140625 1.9123743 12.954112 120-129
ACCCT 5693155 1.902899 44.186634 10-14
ATTGG 4889480 1.9025627 21.902344 100-109
TTCAG 4769685 1.901391 46.016922 45-49
GGGGC 8922440 1.8966832 32.709442 90-99
TGCAC 5770560 1.8826742 25.999544 25-29
AGGGG 7535505 1.8712364 38.20622 90-99
TGGGA 5999325 1.8648704 14.8335905 120-129
CTGTA 4676475 1.8642339 23.574568 190-199
GGATC 5682950 1.8097793 20.931707 70-79
AACTA 3963300 1.8077152 29.029194 130-139
GTGGT 5541460 1.8017304 25.654545 120-129
TTATT 2946630 1.7966433 29.725033 240-247
ATACT 3743825 1.786109 26.439775 130-139
GGTGG 6844335 1.7777345 20.509407 40-44
GGTCT 5331180 1.7758015 26.494976 15-19
GTCAC 5438075 1.7741992 34.90552 160-169
CCTGC 6352380 1.7741427 41.264965 20-24
TATGC 4401670 1.7546853 13.73535 50-59
GATGG 5604390 1.7421062 18.938805 100-109
ACAAT 3815365 1.7402401 24.512144 180-189
CTGAA 4558615 1.7373822 23.52451 200-209
AGGAC 5688795 1.7320192 18.801025 230-239
GTGCA 5436950 1.7314386 54.472164 25-29
TAGTG 4420240 1.7199751 25.361958 120-129
CAGTT 4268475 1.7015884 24.907856 190-199
TATCA 3566025 1.7012839 14.684185 170-179
GAGGA 5695030 1.6924777 26.105421 220-229
AGTCA 4396800 1.6757112 29.784674 160-169
TACAT 3501245 1.6703784 12.396522 190-199
ACCAG 5324355 1.6607525 14.910715 190-199
GTCCG 6088465 1.6597949 37.174145 70-79
CCTGG 5989040 1.6326904 47.179844 4
CGTCC 5840370 1.6311444 20.18543 180-189
GCAAA 4476030 1.6309328 33.236362 200-209
GGGCC 7478815 1.6287311 21.14547 150-159
TTCCA 3980540 1.625658 20.764135 180-189
CATGA 4264340 1.6252279 22.99443 60-69
CCGTG 5916800 1.6129968 16.73232 150-159
AGTTC 4045380 1.6126536 21.765818 190-199
CGATT 4038140 1.6097673 35.23355 160-169
TGAGC 5025255 1.6003312 12.758386 60-69
ATATT 2744415 1.5998036 29.297132 240-247
AACAC 4275850 1.5961401 21.541716 190-199
CTCAG 4861375 1.5860482 50.092606 6
AGCAC 5072780 1.5822822 19.466671 130-139
GGATG 5088805 1.5818384 20.432983 100-109
TCTGC 4619480 1.5764117 32.138805 200-209
GGGGT 6055720 1.5729012 128.20189 9
GTGAC 4914075 1.5649251 16.043875 210-219
CTCCC 5466265 1.5640413 12.065919 190-199
TTCTC 3653665 1.5607568 22.056314 190-199
ATTAT 2676535 1.5602343 14.021426 240-247
TTCTG 3708700 1.5464033 30.086792 30-34
AGTGA 4150805 1.5441493 56.705765 9
CTGGT 4631355 1.5426918 34.398968 35-39
CATCA 3942540 1.5393735 33.04255 45-49
AAGAG 4319325 1.5362203 20.931652 150-159
ATGCA 4026815 1.5347022 15.351179 60-69
GTTCT 3653815 1.5235181 21.940247 190-199
GAACT 3997105 1.5233791 15.326161 190-199
GCACT 4632250 1.5112948 24.84718 25-29
ATCCG 4614360 1.5054581 25.445883 70-79
TCTCA 3649035 1.490271 25.340494 100-109
CAAGG 4891215 1.489187 14.270221 25-29
TCCGT 4359190 1.4875871 13.943656 150-159
TGTCC 4354195 1.4858824 60.9704 15-19
CTCAA 3805380 1.4858191 21.32583 150-159
TCAGC 4540190 1.4812598 9.52563 45-49
GCTGA 4628760 1.4740641 19.839066 200-209
GAGAG 4937110 1.4672352 28.051212 220-229
GTCCA 4492390 1.465665 29.293562 180-189
GCTAT 3666320 1.4615446 20.253056 50-59
TTAGT 2977400 1.4502519 22.945606 110-119
CCATA 3706515 1.4472171 14.762013 160-169
GGACT 4512485 1.4370357 16.21045 90-99
AGACC 4597950 1.434175 98.79818 9
GGAGC 5630695 1.4324642 10.140181 60-69
CACAG 4586725 1.4306738 11.457667 140-149
ACTCC 4275905 1.4291925 17.642763 140-149
CAATT 2978300 1.4208913 22.676289 180-189
TGGTA 3640475 1.416558 22.4379 120-129
ATCTA 2968235 1.4160893 19.939642 110-119
TCTGA 3551130 1.4156253 15.67132 220-229
TTTAT 2315580 1.4118743 14.642275 240-247
CACGT 4314865 1.4077466 19.033941 180-189
CTTTA 2820165 1.4072984 39.97124 45-49
TGGAA 3782210 1.4070275 19.347471 120-129
GCACA 4505530 1.4053476 13.900024 130-139
CGGCC 6277075 1.4004879 28.827137 230-239
CAACC 4367615 1.395686 16.950562 140-149
CAACT 3560120 1.3900567 15.716781 130-139
TCAAG 3644895 1.3891444 24.996536 150-159
AGTCG 4347465 1.3844837 17.06166 150-159
CGGCT 5071225 1.3824819 25.580801 230-239
GATTG 3543925 1.3789891 25.68922 100-109
TCGGA 4329080 1.3786288 102.38503 7
GCCGT 5033225 1.3721226 25.561747 230-239
AGTTA 2943435 1.3706968 18.64856 50-59
ATACA 2995520 1.3662976 18.497673 35-39
CCATG 4184510 1.3652176 12.885015 160-169
AATTC 2842545 1.3561251 22.493998 180-189
TCACT 3296705 1.3463789 15.257459 190-199
CTTCG 3941310 1.344984 110.23774 5
GTCGA 4214090 1.3420094 12.8928175 160-169
TGTGT 3296255 1.3415796 18.812357 240-247
GTGGC 5036950 1.3403208 16.544453 40-44
GTTAC 3353000 1.3366426 14.986748 50-59
AGAGC 4384265 1.33484 24.607841 220-229
CGACA 4273110 1.3328521 12.691738 70-79
GGAGA 4435530 1.3181732 94.72742 9
AACCC 4112325 1.3141073 20.667017 140-149
ACATA 2864300 1.3064464 20.469316 130-139
ACGTC 4002420 1.3058097 21.067364 180-189
TTCGG 3895655 1.2976321 107.10249 6
AACCA 3446655 1.2866083 19.592823 190-199
GATCC 3889655 1.2690195 25.360699 70-79
TTGGG 3894490 1.2662405 14.185281 100-109
CCGAT 3878270 1.2653052 26.284704 160-169
ACAGT 3282335 1.2509656 12.380599 120-129
GACCC 4667865 1.2463815 48.474968 10-14
TCGAG 3894175 1.2401301 12.720783 160-169
GGCAG 4826250 1.2278112 10.526491 70-79
TACGC 3760150 1.2267679 22.594921 140-149
TTACA 2560775 1.2216979 8.198657 120-129
CCAGT 3734480 1.218393 18.181524 190-199
TGGAC 3796140 1.2089101 11.697318 80-89
GAGCA 3917630 1.1927677 7.804059 130-139
GGCCT 4344960 1.1844927 43.233128 3
GGCTT 3534350 1.1772823 14.151533 25-29
GCCAA 3761430 1.1732508 16.859428 180-189
AGCTA 3072310 1.1709205 19.147238 50-59
AAAAA 2280475 1.161674 7.3213305 190-199
CCTTT 2708665 1.1570759 42.052395 45-49
AAGCT 3032995 1.155937 14.057578 200-209
CGCAG 4391310 1.1445146 15.407524 140-149
TTATA 1959850 1.1424567 12.447773 110-119
CCGTC 4087045 1.1414621 10.383303 140-149
ACCGC 4253695 1.1357927 15.559182 220-229
AGCAG 3730460 1.1357816 12.16688 50-59
TAGAC 2977435 1.1347618 17.136154 170-179
CTATA 2377975 1.1344874 12.119596 50-59
GGGAC 4446275 1.1311445 13.046735 90-99
GAACC 3614555 1.1274382 11.51212 190-199
CTACG 3453260 1.1266434 13.579711 140-149
CCTAC 3351125 1.120091 12.652716 190-199
ATTCC 2738815 1.1185359 20.346172 180-189
ACACA 2993295 1.1173728 7.1591387 130-139
GAAGT 2999095 1.1156993 9.662858 140-149
TAGCA 2910550 1.1092706 9.372251 50-59
ACATG 2907005 1.1079196 10.275034 190-199
TAGTT 2274305 1.1077837 17.476698 50-59
AACTG 2903905 1.106738 15.258779 60-69
GAGCC 4230290 1.1025476 18.99076 220-229
CGCTG 4039200 1.1011385 9.7295475 190-199
TGGCT 3286135 1.0946027 32.005997 40-44
GGGTG 4203795 1.0918857 11.361881 60-69
GTATA 2341855 1.0905534 10.950623 240-247
GGGAG 4382995 1.0883969 9.955335 5
ACCAA 2895935 1.081029 16.811481 130-139
CGAGT 3386045 1.0783122 17.987164 160-169
ATTAG 2313920 1.0775448 22.882545 110-119
ACTCA 2754755 1.0756003 13.921531 190-199
ACACC 3351910 1.0711141 12.915707 40-44
ACAGA 2931155 1.0680262 15.11106 140-149
TTTCA 2137490 1.0666349 8.163276 100-109
CTTCT 2495025 1.0658139 18.360062 30-34
GCCCC 4650320 1.0629439 13.914447 80-89
ATATA 1889850 1.0532341 12.275402 130-139
GTGCG 3953550 1.0520306 13.250485 240-247
TATTT 1720410 1.0489824 12.255199 240-247
ATCAA 2297815 1.0480647 11.861142 110-119
AGCCC 3908150 1.0435276 15.149035 80-89
TGAGT 2679765 1.0427327 15.665768 90-99
CTCCG 3723995 1.0400666 9.905737 150-159
CAGCT 3187225 1.0398483 8.660784 50-59
GTAGA 2788080 1.0371993 15.906397 170-179
CGAGG 4076960 1.0371898 16.491322 220-229
GACTG 3253770 1.0361881 15.435215 90-99
CCAAC 3235665 1.0339676 12.810375 130-139
CGGAG 4049680 1.0302496 81.46539 8
AACTC 2627045 1.0257355 16.45425 190-199
AGCCG 3921685 1.0221155 20.141857 220-229
ATGAC 2675500 1.0196882 8.16027 160-169
TGCGA 3178345 1.0121685 10.407091 240-247
CGTGA 3158135 1.0057323 20.154287 150-159
GTCTG 3017725 1.0051961 16.126955 3
ATGAG 2696460 1.0031155 17.798483 60-69
CGTGT 2997885 0.99858725 17.669428 230-239
CACAT 2542975 0.99291027 12.718541 130-139
GCAAG 3242145 0.9871085 15.363053 25-29
TACCA 2527090 0.98670787 9.030744 130-139
TATAC 2067150 0.9861987 9.6957 130-139
CCCCA 3596470 0.98381776 18.097229 80-89
TTTAG 1988775 0.9687058 31.472878 45-49
ATGGG 3109655 0.96662605 15.926756 100-109
GAAGC 3168755 0.964764 11.473168 200-209
ATAGT 2069410 0.96368146 15.970341 120-129
GTTTC 2310630 0.9634551 5.4496627 100-109
GCTTC 2814085 0.96031505 26.013306 2
CCCAG 3587970 0.95803547 15.770777 80-89
CCGAG 3666610 0.95563495 18.18235 220-229
ACGCA 3047360 0.95052093 18.801344 140-149
AAGGC 3114280 0.94817847 21.241402 25-29
AGGCC 3636520 0.94779235 10.083906 70-79
TACAG 2483595 0.9465492 5.976677 120-129
AGCTC 2900910 0.94643646 11.263721 210-219
GCTCT 2769835 0.9452147 14.0136385 210-219
TATTG 1922395 0.93637305 10.322436 240-247
GTCTA 2339660 0.932684 7.6519012 30-34
GACAG 3051035 0.9289229 12.280831 70-79
ACAAG 2547015 0.928057 12.746542 80-89
CCCCT 3242380 0.92772967 9.489044 140-149
ATCAT 1933350 0.92236507 8.857094 110-119
TGAGG 2959200 0.9198576 7.7989755 220-229
CATTA 1927890 0.9197603 12.831366 110-119
CGTAT 2306550 0.91948485 8.014857 110-119
GCAGT 2886320 0.91917086 7.298684 50-59
GATAC 2391460 0.9114347 21.189354 35-39
GACCG 3483435 0.9078936 10.544382 220-229
CTGAC 2777195 0.9060738 9.127094 220-229
GATGA 2432360 0.9048671 8.020562 60-69
CAGCA 2891565 0.9019259 8.113112 45-49
AGTCT 2244645 0.8948071 12.850134 8
TACAC 2281530 0.89082843 17.230867 35-39
GATCT 2234545 0.8907808 7.04214 220-229
CATAC 2274285 0.88799965 12.828975 130-139
CCTCC 3089950 0.88411546 10.791927 140-149
GCCAT 2698075 0.8802605 6.998464 60-69
TTGAG 2253525 0.87687695 15.339529 90-99
GCACC 3247680 0.8671734 11.081859 130-139
AGATC 2266940 0.86397755 8.290971 210-219
CGCCG 3870975 0.86365926 12.590805 220-229
TTGGA 2202395 0.8569816 8.453569 60-69
TTTCT 1639560 0.8557725 9.741652 4
AATAC 1874190 0.8548436 11.901098 130-139
CTTGA 2137685 0.8521685 16.237576 90-99
AATCA 1866840 0.8514912 11.517334 110-119
AGGTC 2672860 0.8511929 15.240318 15-19
TCTTC 1974030 0.84325755 36.630436 4
CGGAC 3233220 0.84267956 12.280166 220-229
ATGGT 2161435 0.8410435 7.9412336 120-129
GTAGC 2608135 0.8305807 9.713829 50-59
TCATA 1740725 0.8304673 6.889599 120-129
CGTCT 2388970 0.81524336 6.4737644 35-39
AAACT 1776865 0.81045234 11.369813 130-139
TATGG 2074730 0.80730546 10.665407 35-39
ATGAT 1733160 0.8070968 7.5526314 120-129
GGTTC 2411180 0.8031575 9.836388 160-169
TAACA 1757950 0.80182505 6.819249 120-129
GAAAT 1788860 0.79642326 6.6573734 110-119
TACTT 1590190 0.79352516 12.543316 3
AAGGT 2126255 0.7909924 18.12135 15-19
ACTTC 1930850 0.7885619 32.743366 4
CAACG 2524445 0.78741527 16.135014 180-189
GGTAT 2013365 0.7834275 9.4319515 110-119
ACAAA 1794855 0.782678 12.134215 130-139
ATTTA 1342645 0.78266895 7.4060545 110-119
TTATG 1599755 0.77921945 9.7809515 50-59
TCAAT 1632130 0.7786587 7.9706364 110-119
TGGTT 1908810 0.77688783 8.784973 35-39
ACAGG 2546995 0.7754621 11.733405 70-79
TGGCA 2427465 0.77304494 5.1736107 100-109
GTTCA 1936105 0.7718105 11.624682 160-169
TATAG 1635090 0.76142764 7.6790004 120-129
AACGC 2433495 0.7590465 15.444303 180-189
AAGTT 1629595 0.7588687 12.410256 140-149
ATAAA 1423060 0.75823087 9.361427 110-119
CCCCC 3237240 0.75806755 14.091247 80-89
TCCTT 1773615 0.75764525 12.220522 3
TCCGG 2779035 0.7576012 12.897301 70-79
CAGAA 2077870 0.75711435 12.994356 140-149
AGAAG 2120145 0.7540553 10.90597 140-149
TGATG 1929855 0.75093263 12.364662 120-129
GTTAT 1536500 0.7484087 8.270673 50-59
ACGCC 2799640 0.74754083 13.8927 180-189
TTCAT 1489855 0.7434567 5.29783 40-44
TATGA 1583840 0.7375615 5.1037407 50-59
CAGTC 2243065 0.7318113 5.629142 210-219
ATTTC 1466440 0.7317724 6.4941435 240-247
TGACT 1832240 0.7304056 6.1908436 40-44
AAATA 1364260 0.72690123 13.014539 130-139
GCCGC 3250670 0.72526205 12.692391 220-229
GCGGA 2843875 0.7234895 10.714962 220-229
AGTAC 1897870 0.7233174 5.382075 130-139
GAAGA 2015505 0.71683884 5.6588407 15-19
GGATA 1925415 0.7162775 15.863693 35-39
GAGAT 1918610 0.71374595 7.756906 210-219
TCAAC 1827340 0.71348894 6.2294354 110-119
TCATC 1742070 0.7114638 6.044729 110-119
GCCTA 2172950 0.70893586 12.488961 190-199
ATGCC 2155335 0.7031889 7.199229 50-59
TTTAC 1409035 0.7031265 11.027352 45-49
GGTAG 2256330 0.70137274 9.385712 120-129
CATGG 2195985 0.69932836 7.3751245 200-209
AATTA 1243775 0.6931694 6.333194 50-59
ACGAC 2216520 0.69136846 9.921709 220-229
TGCCA 2116310 0.69045687 6.6538706 60-69
ACGCT 2109885 0.68836063 11.852816 190-199
AGTAT 1469285 0.68421566 7.80545 110-119
GACGA 2245480 0.68366235 11.827963 220-229
CCGTA 2086155 0.68061864 6.428246 230-239
GGTGC 2550815 0.678766 8.427227 60-69
AATGG 1819915 0.6770302 6.328939 120-129
ACACT 1725020 0.6735379 6.3996344 2
ACCTA 1721475 0.6721538 7.969042 130-139
AGATG 1805490 0.67166394 7.0558543 120-129
GACCA 2139625 0.6673836 5.531085 170-179
GGTTA 1706775 0.6641292 6.5053735 50-59
ATTAA 1190950 0.6637296 8.478363 110-119
CTGCG 2434530 0.6636846 15.0241585 25-29
CGGCA 2545010 0.6633103 12.049931 70-79
CACCG 2473750 0.66052395 9.176571 45-49
ATCTT 1321315 0.65935314 13.240304 3
TGTTT 1290385 0.657423 5.201356 240-247
CCGGC 2924270 0.65243846 10.296035 70-79
TATGT 1335125 0.6503216 8.174862 140-149
ATCCA 1656810 0.6469051 5.595238 180-189
CCAGC 2416915 0.64534825 6.122382 80-89
AGTAA 1410445 0.6279481 7.036139 50-59
GATCA 1645980 0.6273169 7.798174 110-119
CTATC 1531330 0.62539726 6.139257 110-119
GGGAT 2005600 0.6234342 10.824385 100-109
CACAA 1668690 0.6229085 8.145318 130-139
CCCGT 2194850 0.61299497 9.577911 140-149
TAATA 1094305 0.60986817 5.8144975 130-139
CCATT 1452530 0.59321535 5.0495663 110-119
TATCC 1451495 0.5927926 6.323419 170-179
TTACC 1440430 0.58827364 7.711081 45-49
GCTTG 1765035 0.58792835 11.803451 90-99
GGTGA 1888955 0.5871754 5.9246206 120-129
AAGAT 1299820 0.5786964 6.6586914 120-129
GGGCA 2259345 0.57478356 9.77716 150-159
CTGTT 1368880 0.570777 5.3907347 240-247
ACATT 1174850 0.56049895 6.9074655 110-119
CATAA 1220060 0.55648607 7.886116 110-119
ACCCG 2077705 0.5547747 8.4630165 140-149
AACAT 1210030 0.5519112 7.5433755 110-119
AGTTG 1415930 0.5509575 5.8760643 60-69
TCAGG 1725070 0.5493618 5.7373934 150-159
GTACT 1375715 0.54841614 7.009905 2
GGGTT 1685320 0.5479589 5.968831 100-109
GCGAC 2078115 0.5416226 6.2806163 70-79
TGGCC 1975530 0.5385552 10.744314 4
TGTGG 1649860 0.53642964 5.2407017 140-149
ACCCC 1953950 0.5345049 9.3875885 140-149
GGGGA 2108540 0.5235982 8.269893 4
GTTTA 1074300 0.5232772 5.976301 240-247
CACGC 1957160 0.52258754 9.479735 190-199
CACTT 1276355 0.5212652 5.998823 3
GGCCC 2308195 0.514985 7.584902 70-79
TGACG 1616340 0.51473594 8.321496 220-229
AGGCA 1690145 0.5145842 6.367724 80-89
GAGTT 1315695 0.51195467 5.440088 60-69
TTAGC 1262545 0.503302 7.4590507 45-49
CGGTT 1506010 0.5016478 9.81701 160-169
GTCCT 1465990 0.50027364 6.3383374 2
TAGCT 1248750 0.4978027 10.24005 50-59
GAGTA 1333840 0.4962045 5.688956 110-119
GGTTT 1217785 0.49563986 5.829915 100-109
ATTCT 988090 0.49306962 9.8237705 2
CAATC 1262655 0.49300644 5.4069624 110-119
CAAAC 1318785 0.4922918 8.93122 130-139
TGCGC 1762465 0.4804709 9.975436 25-29
AATAA 899955 0.4795115 5.1865473 130-139
AAGTG 1278780 0.4757215 6.1967435 120-129
AAATC 1034680 0.47193167 7.189763 110-119
TCCAC 1397740 0.4671852 5.7035236 180-189
GCTAC 1410660 0.46023488 6.294681 50-59
TGATT 943090 0.4593666 5.114899 50-59
CCGCA 1692795 0.45199862 5.903522 220-229
GGTCA 1392190 0.44335365 5.541304 160-169
CCCTA 1320890 0.44149864 7.1089144 110-119
GCCTT 1292775 0.44116345 14.928384 3
CGCGG 2012245 0.4382253 5.893353 220-229
AACCT 1100360 0.429638 7.736749 2
TACCT 1049685 0.4286928 6.5394936 2
CCGGT 1559815 0.4252259 7.88948 160-169
GCATG 1328740 0.4231475 8.478544 60-69
ATTGT 855160 0.41653705 8.5246725 240-247
TTCTT 795185 0.41504884 13.7136 3
GCGCT 1506755 0.41076103 8.8407135 25-29
TTAAT 689615 0.40199775 6.021249 110-119
CCGGG 1815825 0.39544913 5.548195 80-89
GCGTC 1435520 0.3913414 5.914253 30-34
GACTT 975900 0.38903356 7.5689836 1
GTGTC 1160825 0.38666767 5.1150026 30-34
CCTAA 982060 0.3834475 6.7881684 110-119
ATCCT 938755 0.38338885 9.352797 2
AGCTT 942090 0.3755555 7.4345617 1
ATGTG 956770 0.37229213 6.048397 140-149
AACTT 780270 0.3722522 11.764618 3
TAAAT 662310 0.3691126 5.7336884 130-139
CAGCG 1396520 0.36397743 6.4371448 30-34
CATGC 1099320 0.35865867 6.1988297 60-69
CTCTT 831030 0.35499585 6.5938306 1
CGGGA 1385315 0.3524279 5.2734094 80-89
CGTCA 1068510 0.34860677 5.722034 45-49
AGCGT 1084910 0.34549797 6.6377997 30-34
CCGCG 1528050 0.34092563 5.8435707 220-229
GGTAA 903565 0.33613703 5.9736605 120-129
TAACT 692710 0.330479 6.919255 2
TAAAG 722440 0.3216395 5.4111195 110-119
TGCTG 949860 0.31639582 11.956995 1
AATCT 653425 0.31173685 8.153573 2
TTCCT 729710 0.31171435 7.4124985 2
TTGTG 740025 0.301191 5.7942886 240-247
GTCTT 693350 0.28910366 10.551789 1
TTGGC 841790 0.28039795 5.2259164 3
CCCTT 787795 0.27541986 6.5196896 1
TGCCT 717215 0.24475184 8.345618 2
TGTAA 498190 0.23199679 6.7939134 25-29
CGGGG 1052680 0.2237729 7.780823 3
TGCTT 535780 0.22340226 9.660799 1
TTGCT 275890 0.11503686 5.822364 4