FastQCFastQC Report
Sat 8 Jul 2017
HNCHNBCXY_s2_2_illumina12index_6_SL254633.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HNCHNBCXY_s2_2_illumina12index_6_SL254633.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 19248008
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[OK] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 89431 0.46462470298225145 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 67777 0.35212474974033675 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 48117 0.24998431006470903 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 46321 0.24065347437511453 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 41443 0.215310592140236 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 40880 0.2123856141373175 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 40312 0.20943465942034103 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 39945 0.20752796860849188 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38689 0.2010026180371496 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38509 0.20006745633106554 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 38305 0.19900760639750356 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 38122 0.19805685866298478 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 37860 0.19669567884635125 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 37280 0.1936823800156359 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 36943 0.19193154948813407 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35972 0.1868868716180916 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 35890 0.18646085350754218 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35759 0.18578026359922542 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35694 0.18544256631647285 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 35496 0.18441388843978035 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 35210 0.182928020395669 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 35045 0.1820707888317586 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 34920 0.1814213709803113 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 34747 0.18052257667390828 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 33339 0.17320753399520616 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 33118 0.17205936323384738 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 32719 0.16998642145202766 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 32689 0.1698305611676803 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 32331 0.1679706284411353 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 32167 0.16711859222003647 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 31964 0.1660639376292861 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31750 0.16495213426760835 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 31317 0.162702550830195 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 31120 0.1616790682963141 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 30484 0.15837483026815033 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 29693 0.15426531410419198 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 29291 0.15217678629393755 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 28047 0.14571377983633424 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 27683 0.14382267505291976 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27640 0.1435992753120219 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 27534 0.14304856897399462 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27501 0.14287712266121252 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 27348 0.14208223521104107 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26870 0.13959886134710667 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 26412 0.13721939433940386 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 26031 0.13523996872819255 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 24349 0.126501402119118 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 22087 0.11474953667932805 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 21619 0.11231811624350947 No Hit
AAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 20734 0.10772023785526273 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 20580 0.1069201550622797 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 20294 0.10543428701816832 No Hit
TAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 20098 0.104415999827099 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19798 0.10285739698362552 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 38459340 7.6239014 67.379074 35-39
TATTA 20210915 7.283138 132.43991 240-247
TGGAT 29429825 7.1150455 81.87064 35-39
TCACC 30818500 6.412429 73.20455 160-169
TCTCC 27490860 5.9913106 87.494804 20-24
TCCCT 27342860 5.9590564 73.886986 10-14
CTGTG 27960915 5.805628 91.44336 25-29
AGTGG 29021350 5.6153293 47.268463 100-109
CTGAG 26481615 5.2495236 60.83882 15-19
TTACT 16583985 5.132503 100.58493 240-247
CCTGA 24672570 5.010807 62.29014 15-19
TGGGT 24321560 4.9291425 46.697285 100-109
TGTAT 16297470 4.923146 55.89003 240-247
CTCCA 23404815 4.869859 44.235214 80-89
CTCTG 22868405 4.86465 85.304756 35-39
ATTAC 16254665 4.802817 104.17288 240-247
GACAC 24518910 4.754141 53.756344 230-239
GAGAC 24825965 4.698499 80.817154 8
ACACG 24176905 4.6878266 57.59591 230-239
TTCAC 18245000 4.629878 71.611916 40-44
TGAGA 20008075 4.6182027 104.718605 15-19
AAGGG 24994065 4.61713 49.07077 90-99
ATTCA 15525215 4.587284 113.28576 40-44
GAAGG 23600770 4.359748 39.786987 90-99
GGGTC 26097445 4.33674 124.29584 8
CCAGG 26509400 4.3088436 58.682137 80-89
CCCTG 24629270 4.2958846 91.91533 10-14
TACTG 17245030 4.2714157 73.41341 240-247
TCTGG 20509410 4.258444 144.78926 35-39
GACTC 20260175 4.114684 62.565945 20-24
TCCAG 20144100 4.0911098 44.709766 80-89
AGACT 17231395 4.0747967 78.27852 15-19
CTGGG 24514415 4.0736804 143.59706 5
TGGAG 21001020 4.063478 40.81583 90-99
ACCAT 16703730 4.046847 65.62197 160-169
CAGCC 23999845 3.996567 56.210922 30-34
ACTGG 20139515 3.9923117 47.17069 60-69
CAAGA 17677925 3.9911163 48.232796 180-189
TACTA 13404265 3.9605997 30.579231 130-139
CACCA 19908635 3.9548519 56.473507 160-169
GATTC 15965755 3.9545527 66.12311 40-44
AGCCT 19183270 3.895973 52.65951 30-34
ACTAC 15847195 3.8393323 29.474966 130-139
AGACA 16763255 3.7846127 36.87671 170-179
TCAGT 15184115 3.7609482 50.80356 7
ACTCT 14427445 3.6611304 79.72249 20-24
CCTGT 17095230 3.636559 69.93258 25-29
TGAAG 15662820 3.6152442 43.131844 150-159
GCTGG 21618200 3.592402 37.0777 90-99
CACCT 17244975 3.5881755 42.713856 45-49
ACTGT 14219265 3.521965 57.48555 240-247
GGTCC 20670780 3.5191686 133.88779 9
GGATT 14358565 3.4713717 64.652374 40-44
TATCT 11173065 3.457902 48.602184 200-209
GAGTG 17738970 3.432306 46.11813 100-109
GGAGT 17494415 3.384987 39.28988 90-99
GGCTG 20294540 3.372443 38.770634 90-99
GTCCC 19220450 3.3524678 81.99928 10-14
GTATT 10991695 3.3203754 61.899075 240-247
GGACA 17332040 3.280218 26.874033 230-239
AAGAA 12158480 3.1962047 37.243362 180-189
AGGGA 17167305 3.1713 45.035427 80-89
TCCTG 14826800 3.1540105 68.04403 25-29
CTGCA 15092320 3.0651329 47.1476 25-29
CCATC 14720270 3.0628583 38.76835 45-49
GTCTC 14325195 3.0473073 34.80267 30-34
CCTCA 14575700 3.0327778 42.991585 5
GGAAG 16340900 3.0186388 33.607414 80-89
CTCCT 13848640 3.018149 94.16157 20-24
ATGAA 10814050 2.9775982 32.735043 210-219
CATCT 11687045 2.9657223 35.920006 170-179
GAACA 12582725 2.8407812 37.84749 210-219
AGTAG 12258385 2.8294427 30.162264 50-59
GGGAA 15167210 2.8018243 36.688137 80-89
ATCTC 10964270 2.7823095 49.444828 170-179
CAGGG 17531380 2.7813718 40.78837 80-89
GACAA 12252160 2.7661502 30.772923 180-189
CGCCA 16565200 2.7585154 43.613293 70-79
CCCTC 14996025 2.6797547 34.5538 20-24
GTGAA 11598160 2.6770515 41.546543 150-159
TGTGC 12770235 2.651531 59.450237 25-29
CACGG 16301005 2.6495688 51.092346 230-239
CCAAG 13661990 2.6490173 41.37823 180-189
GAGTC 13361780 2.6487427 29.531387 160-169
AGAAC 11662430 2.6330078 34.94323 190-199
CCGCC 18266455 2.6124063 37.06761 70-79
ACGGC 15878740 2.5809338 53.826363 230-239
CTGTC 12111705 2.5764456 48.884785 30-34
GGGGG 19735305 2.5618808 110.97526 7
TATAT 7105710 2.56059 28.887384 240-247
TGAAC 10747035 2.5414069 40.07918 210-219
AGCTG 12695830 2.5167296 29.203064 60-69
TCTGT 9699800 2.516477 24.744793 210-219
CACTG 12247095 2.4872897 22.867968 30-34
GGGCT 14844280 2.4667466 45.470608 90-99
CAAAT 8743415 2.4664745 38.44757 200-209
AAATG 8899035 2.4503076 37.904564 200-209
AATGA 8883280 2.4459696 31.269808 210-219
CTCTC 11179505 2.4364421 103.11806 20-24
ATCTG 9768345 2.4195182 36.34502 200-209
TCCAA 9946140 2.4096718 44.04866 180-189
ACAAC 10364950 2.3974423 22.243536 180-189
TGCAA 10134950 2.396664 37.485165 200-209
GTGGA 12384795 2.3963284 28.508883 100-109
AGGCT 12085415 2.3957253 24.490944 80-89
ACCTT 9415690 2.3893397 52.844494 45-49
CTACT 9261525 2.3502183 22.515068 60-69
TCTAT 7592660 2.349818 18.766329 110-119
GTGTA 9615235 2.324609 26.912334 240-247
GGCCG 16813855 2.290963 22.530151 230-239
GAGCT 11496995 2.279081 26.066803 60-69
GTGGG 13919945 2.2577975 33.04504 100-109
CTATG 9112635 2.2571056 21.001217 50-59
AGGGC 14167850 2.2477443 31.838829 150-159
GTATC 9068165 2.246091 23.996527 200-209
GCAGC 13811300 2.2448916 39.962036 30-34
CTACA 9254330 2.2420654 14.940627 140-149
CAGTG 11292665 2.2385762 40.729725 8
GCTCC 12790840 2.2310028 36.61065 80-89
CAGGC 13722025 2.2303808 32.19274 70-79
TGCAG 11234615 2.227069 50.256912 30-34
CTCAC 10681590 2.2225268 58.794456 20-24
GTAGT 9081165 2.1954908 23.781717 120-129
AGAGA 9900020 2.181631 33.1431 170-179
CTATT 7025730 2.1743617 18.33757 110-119
ACAGC 11172710 2.166354 28.382406 210-219
TGGGG 13352825 2.1658113 136.68385 6
GGCTC 12711940 2.1641881 21.381767 80-89
CAGTA 9088915 2.1493025 23.129847 50-59
TGTGA 8800135 2.127548 20.080503 210-219
CCTCT 9725180 2.1194892 53.381306 35-39
TGGTG 10451470 2.118153 33.08977 35-39
CTTCA 8338430 2.1159723 48.32075 45-49
GCCTC 12096955 2.1099744 47.63921 30-34
GCTGT 10161675 2.1099062 20.082497 230-239
TCCGC 12092605 2.1092153 44.882385 70-79
CAGAC 10838040 2.1014626 27.27871 140-149
TCTCT 7887080 2.0963526 40.580193 35-39
GCAGA 11069440 2.094974 25.669859 140-149
CAGAG 10989585 2.0798612 37.50154 170-179
ATCAG 8777880 2.0757506 26.00243 45-49
AACAG 9191125 2.0750651 35.961964 210-219
CCAGA 10652535 2.0654936 38.44276 170-179
GCCGA 12687765 2.062272 21.137922 220-229
CATAT 6976640 2.0614095 15.232267 170-179
GCCTG 12086430 2.0576963 27.490232 210-219
GCCAG 12582130 2.0451021 39.011486 70-79
TGTCT 7791445 2.0213814 47.370647 30-34
ATATC 6827225 2.0172615 15.995217 170-179
CCTTC 9189160 2.0026698 51.972256 45-49
CTGTA 7813750 1.9353852 24.278254 190-199
ACTAT 6515530 1.9251639 14.84146 50-59
TCCAT 7579540 1.9233954 33.70071 45-49
TTCAG 7763805 1.9230142 45.660984 45-49
ACCTG 9444265 1.9180567 38.421234 25-29
TACAA 6745030 1.90274 18.176395 140-149
GGGGC 14298985 1.9016831 33.3665 90-99
TAGTA 6577815 1.8970631 17.515469 120-129
TGCAC 9338570 1.896591 25.029295 25-29
AGGGG 12245365 1.8962555 38.77878 90-99
AGAGT 8214330 1.8960065 26.401974 150-159
TGACC 9295575 1.887859 15.0649 210-219
ATTGG 7715405 1.8653004 21.275887 100-109
ATGGA 8073125 1.8634139 13.662968 120-129
ATACT 6236620 1.8427536 26.532454 130-139
ACCCT 8838180 1.8389671 42.144146 10-14
GTGGT 9064620 1.8370863 26.538433 120-129
TATGC 7340005 1.8180435 14.20206 50-59
TGGGA 9382565 1.8154284 14.467435 120-129
ACAAT 6408405 1.8077797 25.87135 180-189
AACTA 6400010 1.8054113 28.025412 130-139
TTATT 4749175 1.7925575 29.660007 240-247
GGTGG 10981105 1.7811219 21.00912 40-44
AGGAC 9388180 1.7767831 20.893545 230-239
TAGTG 7330745 1.7723038 25.906292 120-129
GTGCA 8925165 1.7692599 54.819244 25-29
GGTCT 8489060 1.7626148 23.852795 15-19
GGATC 8880115 1.7603297 21.209602 70-79
GTCCG 10109520 1.7211303 38.81266 70-79
GAGGA 9316155 1.7209644 25.915424 220-229
CTGAA 7272610 1.7197915 23.190151 200-209
CCTGC 9820885 1.7129776 36.93798 20-24
CAGTT 6887755 1.7060258 24.171934 190-199
GCAAA 7547685 1.7040285 34.399094 200-209
TTCCA 6668410 1.6921856 23.078878 180-189
CGATT 6823315 1.6900647 37.038307 160-169
GTCAC 8281740 1.681957 33.22786 160-169
GATGG 8675560 1.6786306 17.651451 100-109
CCGTG 9856195 1.678002 18.219528 150-159
GGGCC 12066355 1.6440948 21.440105 150-159
ATATT 4561985 1.6439418 30.564396 240-247
TACAT 5535385 1.6355574 10.894526 190-199
TATCA 5531400 1.6343801 15.303648 170-179
TCTGC 7679655 1.6336437 33.55629 200-209
AACAC 7043685 1.6292242 23.267752 190-199
TGAGC 8212730 1.6280322 13.750793 60-69
AGTCA 6881655 1.6273404 28.74346 160-169
GGGGT 9989065 1.620214 134.1724 9
ACCAG 8273795 1.6042631 14.960198 190-199
CATGA 6775900 1.602332 23.985445 60-69
CCTGG 9400135 1.6003585 49.54369 4
AGCAC 8189355 1.5878906 20.0854 130-139
CGTCC 9099335 1.5871235 19.806772 180-189
TCTCA 6237535 1.582846 26.785477 100-109
ATTAT 4380855 1.5786703 14.050111 240-247
ATGCA 6639505 1.570078 16.512926 60-69
CTCCC 8764705 1.5662326 11.921643 190-199
AGTTC 6306970 1.5621713 20.560614 190-199
TTCTC 5864070 1.5586451 21.419018 190-199
TCCGT 7289980 1.5507509 15.842023 150-159
GCACT 7603785 1.5442696 23.893951 25-29
CTCAG 7557095 1.5347872 41.83601 6
GTGAC 7693720 1.5251472 15.693129 210-219
GCTAT 6133210 1.5191327 20.979836 50-59
CTCAA 6267480 1.5184352 21.535337 150-159
GAACT 6419150 1.5179695 15.384493 190-199
ACTCC 7286705 1.5161507 18.538963 140-149
CATCA 6228050 1.5088825 31.480951 45-49
CAATT 5102785 1.5077357 25.081923 180-189
TTCTG 5800055 1.5047431 28.205805 30-34
GGATG 7770375 1.5034868 18.993322 100-109
GTTCT 5794615 1.5033318 20.879286 190-199
GAGAG 8123920 1.5007241 28.76892 220-229
CTGGT 7200385 1.4950426 32.758144 35-39
AGTGA 6442550 1.4870496 47.166367 9
AAGAG 6735530 1.484284 20.008068 150-159
TTTAT 3927160 1.4822912 14.800551 240-247
AATTC 4970895 1.4687657 24.80409 180-189
TTAGT 4851825 1.465641 23.984854 110-119
TGGTA 6060850 1.46529 23.48547 120-129
GCTGA 7372615 1.4614938 18.986082 200-209
TCAGC 7181510 1.4585086 8.857911 45-49
ATCCG 7178635 1.457925 24.80968 70-79
TGTCC 6790875 1.4445795 59.03608 15-19
GTCCA 7049585 1.4317158 28.175434 180-189
GGACT 7200920 1.4274583 15.998853 90-99
AGACC 7358100 1.4267129 87.07655 9
TGGAA 6159185 1.4216441 20.16694 120-129
CCATA 5861790 1.4201479 14.625502 160-169
CGGCC 10138505 1.4152806 29.1162 230-239
GGAGC 8892925 1.4108719 10.2081 60-69
CTTTA 4549825 1.4081049 38.517754 45-49
AGTTA 4860030 1.4016484 17.953722 50-59
CAACT 5767825 1.3973827 15.636992 130-139
CAAGG 7362035 1.3933202 13.509491 25-29
TCAAG 5876495 1.389645 24.263252 150-159
GCCGT 8107020 1.3802079 25.407492 230-239
CGGCT 8088245 1.3770114 25.717854 230-239
CACGT 6766840 1.3742925 19.130459 180-189
TCTGA 5544740 1.3733747 14.8344555 220-229
CAACC 6896455 1.3699813 17.10654 140-149
ATCTA 4610900 1.362397 18.543852 110-119
AGTCG 6856830 1.3592484 16.505003 150-159
GTGGC 8171940 1.357971 16.933985 40-44
CACAG 6995045 1.3563175 10.533109 140-149
AGAGC 7151740 1.3535202 25.584599 220-229
TCACT 5333635 1.3534712 15.441767 190-199
GCACA 6926445 1.3430163 13.589542 130-139
GATTG 5550825 1.3419849 24.611216 100-109
CCATG 6602590 1.3409346 12.827013 60-69
ACATA 4738580 1.3367302 21.49157 130-139
CCGAT 6515765 1.3233012 27.54605 160-169
TGTGT 5223150 1.32265 19.221586 240-247
GTCGA 6671865 1.3225822 13.0208025 160-169
GTTAC 5297215 1.3120655 14.635613 50-59
TACGC 6395220 1.2988194 23.807508 140-149
CTTCG 6072625 1.2917905 111.100685 5
AACCC 6488755 1.2889917 20.109528 140-149
TCGGA 6474755 1.2835087 103.0326 7
AACCA 5527845 1.2786062 19.563816 190-199
GGAGA 6901520 1.2749113 95.45416 9
ACGTC 6249570 1.2692391 21.179775 180-189
ATACA 4496900 1.2685536 16.081852 35-39
CGACA 6526130 1.2653965 11.663405 70-79
TTGGG 6226715 1.2619407 13.586391 100-109
TTCGG 6024590 1.2509077 107.968 6
GATCC 6149355 1.2488861 24.704882 70-79
TTATA 3463695 1.2481655 14.693856 110-119
GACCC 7422405 1.2360138 47.39757 10-14
ACAGT 5216640 1.2336057 12.015635 120-129
GGCAG 7751045 1.2297115 10.22709 70-79
TCGAG 6170520 1.2231992 12.666844 160-169
TTACA 4128550 1.2198755 8.486268 120-129
ATTCC 4787965 1.2150012 22.680853 180-189
CGCAG 7351940 1.1949859 16.47461 140-149
CCAGT 5806510 1.179257 17.747297 190-199
AGCTA 4953115 1.1712886 19.196312 50-59
TAGCA 4948840 1.1702777 10.061506 50-59
CTACG 5760960 1.170006 14.799841 140-149
GAGCA 6163895 1.1665632 7.7240696 130-139
AAGCT 4920340 1.163538 13.775924 200-209
TGGAC 5857745 1.1611968 10.674431 80-89
CCTTT 4356665 1.1579833 43.302452 45-49
GCCAA 5925080 1.1488547 16.782606 180-189
GGCCT 6731210 1.1459783 36.2832 3
CGCTG 6718655 1.1438408 10.749469 190-199
CCGTC 6524130 1.1379513 9.484169 140-149
TAGTT 3763245 1.1368024 17.181238 50-59
ATTAG 3939760 1.1362396 24.356153 110-119
TAGAC 4783220 1.1311127 16.817108 170-179
ACCGC 6749250 1.1239169 15.731907 220-229
AGCAG 5933690 1.1229953 12.3605175 50-59
GAGCC 6888930 1.1197281 19.575249 220-229
GGCTT 5387495 1.1186255 12.538363 25-29
GGGAC 7019020 1.1135749 12.988061 90-99
GTATA 3853495 1.1113604 12.026438 240-247
TGGCT 5337365 1.1082166 31.53307 40-44
CTCCG 6349620 1.107513 11.312652 150-159
GAACC 5706790 1.106529 11.452661 190-199
GAAGT 4768300 1.1006044 8.730024 140-149
ACTCA 4535665 1.0988649 14.001189 190-199
ACATG 4645715 1.0985962 9.175001 190-199
AACTG 4623620 1.0933712 14.760429 60-69
TATTT 2880415 1.0872015 12.551973 240-247
ACACA 4698425 1.086759 6.9281282 130-139
CTATA 3673490 1.0854175 10.955684 50-59
CCTAC 5189420 1.0797668 11.597716 190-199
ATATA 3129475 1.0766677 12.443604 130-139
TTTCA 3472145 1.0745785 8.365409 100-109
GGGTG 6624080 1.0744176 11.368332 100-109
CGTGA 5398745 1.0702082 21.900982 150-159
CGAGT 5374915 1.0654843 18.160702 160-169
GTCTG 5092180 1.0573081 17.89027 3
CGAGG 6644560 1.0541664 16.420782 220-229
AGCCC 6296820 1.0485761 15.383474 80-89
GGGAG 6769915 1.048355 9.245724 5
AGCCG 6448640 1.0481633 20.59279 220-229
ACAGA 4628335 1.0449317 14.267589 140-149
GCCCC 7286690 1.0421177 13.96505 80-89
CAGCT 5123875 1.0406191 8.851409 50-59
CTTCT 3913150 1.0400988 17.967983 30-34
ACCAA 4493155 1.0392795 16.461365 130-139
ACACC 5230595 1.0390581 12.041327 40-44
AACTC 4284865 1.038103 16.753496 190-199
ATGAG 4491975 1.0368239 18.912815 60-69
GACTG 5201895 1.031186 15.370369 90-99
CCAAC 5184965 1.0299937 12.727327 130-139
ACGCA 5145025 0.9976045 19.942595 140-149
CGGAG 6262010 0.9934746 82.392006 8
TATAC 3349965 0.98982465 9.603585 130-139
CACAT 4084615 0.9895881 13.4317 130-139
ATCAA 3504280 0.98854023 11.281692 110-119
GTAGA 4279720 0.98783183 15.452348 170-179
TGAGT 4070610 0.9841234 14.296131 90-99
GCAAG 5196375 0.98345286 14.605545 25-29
CCGAG 6027800 0.9797599 18.715029 220-229
TTTAG 3215930 0.9714693 30.631826 45-49
GAAGC 5120645 0.96912026 11.32229 200-209
CCCCA 5673355 0.9679132 17.633713 80-89
CGTGT 4657075 0.9669657 17.295528 230-239
GTGCG 5809300 0.9653597 12.313055 240-247
TACCA 3972925 0.96252877 8.673826 130-139
ATGAC 4069480 0.96233094 6.995846 160-169
ATAGT 3318670 0.9571152 15.968472 120-129
CCCAG 5740965 0.9560124 15.14467 80-89
AGCTC 4695590 0.9536378 11.5241 210-219
GATGA 4109010 0.9484291 7.954173 60-69
AAAAA 3020465 0.9471945 5.7519493 190-199
GCTCT 4449685 0.94655305 14.011346 210-219
TACAG 3955650 0.93541294 6.3112535 120-129
GTTTC 3591395 0.9317372 5.3149714 100-109
TGCGA 4693155 0.93033713 9.489034 240-247
GCTTC 4367935 0.9291629 24.670044 2
GTCTA 3738310 0.9259408 7.131301 240-247
TATTG 3041440 0.91875935 10.332507 240-247
ATGGG 4737075 0.9165747 14.707383 100-109
AAGGC 4838580 0.9157374 19.596777 25-29
CGTAT 3666000 0.90803033 7.8314867 110-119
GCAGT 4580485 0.9080022 6.9702525 50-59
AGGCC 5585150 0.90781146 9.33067 70-79
TGAGG 4689120 0.90729594 7.807064 220-229
CATAC 3718200 0.90081596 13.632218 130-139
AATAC 3190770 0.9001006 12.698503 130-139
CCCCT 5034995 0.8997419 9.479344 140-149
GCCAT 4427100 0.89910954 7.7963386 60-69
CAGCA 4561660 0.8844918 7.2348056 45-49
GACCG 5434755 0.8833662 10.498579 220-229
CATTA 2984415 0.88181436 13.018839 110-119
CTGAC 4336650 0.88073987 8.776414 220-229
AGTCT 3554035 0.8802978 11.708442 8
ATGAT 3049235 0.87940913 8.171816 120-129
GACAG 4626640 0.87562627 11.289383 70-79
ATCAT 2963430 0.87561387 8.603251 110-119
GTAGC 4392640 0.8707652 9.83294 50-59
GCACC 5212435 0.8679992 11.113203 130-139
ACAAG 3844620 0.8679936 11.627905 80-89
CCTCC 4780260 0.85422146 10.574591 140-149
CGCCG 6110045 0.8529294 12.213925 220-229
CGTCT 3976545 0.845905 7.5612526 35-39
TTTCT 2602010 0.843474 9.288484 4
GGTTC 4058905 0.84276545 10.321934 160-169
ATTTA 2336915 0.8421229 8.618943 110-119
TTGGA 3478660 0.84101164 8.243036 60-69
GATAC 3526305 0.8338835 18.97123 35-39
TACAC 3440970 0.8336509 15.031995 35-39
AATCA 2941560 0.8297996 10.7280855 110-119
TATGG 3419305 0.8266619 10.283421 35-39
ATGGT 3395610 0.8209333 7.7950435 120-129
TTGAG 3389940 0.8195625 13.908658 90-99
CGGAC 5036665 0.8186607 11.883959 220-229
GATCT 3303470 0.8182354 6.744884 220-229
TTATG 2704735 0.8170473 10.432825 50-59
TGGCA 4097820 0.8123221 5.847382 100-109
TCTTC 3050475 0.8108034 34.384182 4
TCATA 2739390 0.80941606 6.962226 120-129
AAACT 2858835 0.8064633 10.56795 130-139
GTTCA 3255140 0.8062646 12.2032585 160-169
AGGTC 4054720 0.80377835 14.404346 15-19
GGTAT 3299500 0.7976974 9.733904 110-119
CAACG 4091900 0.79340667 16.30238 180-189
TGATG 3277875 0.7924693 12.8133545 120-129
CTTGA 3179115 0.7874339 14.548441 90-99
GAAAT 2850910 0.7849848 6.374385 110-119
TATAG 2719735 0.78438044 7.7791634 120-129
GTTAT 2587950 0.7817689 8.016926 50-59
ATAAA 2379015 0.78142077 9.202634 110-119
AAATA 2363115 0.7761981 14.140343 130-139
ATTTC 2504225 0.77502143 6.342047 240-247
ACGCC 4649390 0.7742383 14.0749655 180-189
ACTTC 3039590 0.7713309 33.75055 4
ACGCT 3777935 0.7672692 13.11018 190-199
AACGC 3933580 0.7627089 15.61019 180-189
CCCCC 5196795 0.7614473 13.772415 80-89
TACTT 2454200 0.7595393 13.043551 3
GGTAG 3901365 0.7548735 10.294743 120-129
ACAAA 2802800 0.7548581 11.607993 130-139
TCCGG 4413800 0.7514427 12.803724 70-79
TGGTT 2952645 0.7476936 8.29728 35-39
TAACA 2637395 0.74399626 6.270253 120-129
TCAAT 2513375 0.74263465 7.4215617 110-119
AGATC 3126070 0.7392379 6.9804025 210-219
GCCGC 5247375 0.73250526 12.420697 220-229
CAGAA 3214235 0.7256726 11.944425 140-149
CAGTC 3557115 0.72242236 5.9045258 210-219
TCCTT 2717710 0.7223559 11.664018 3
AGAAG 3273590 0.72138906 9.860585 140-149
AAGGT 3092255 0.7137448 17.10593 15-19
ACAGG 3769875 0.7134771 10.710133 70-79
GCGGA 4496405 0.7133594 10.470779 220-229
TGACT 2877235 0.7126614 5.940325 40-44
AAGTT 2467690 0.7116897 11.242391 140-149
TCATC 2778260 0.7050154 5.7251635 110-119
ATGCC 3464480 0.70360893 7.5173025 50-59
TCAAC 2890880 0.70037943 5.9573216 110-119
AGTAC 2954485 0.6986623 5.2614465 130-139
TGCCA 3433830 0.6973842 7.4183145 60-69
TTTAC 2210275 0.68404806 10.785201 45-49
ACGAC 3518420 0.6822108 9.36559 220-229
GCCTA 3358425 0.6820701 11.455948 190-199
AGTAT 2352305 0.6784123 7.1738772 110-119
GAGAT 2936965 0.67790127 6.8455887 210-219
ATCTT 2189900 0.6777423 12.477936 3
GAAGA 3073245 0.6772398 5.1111174 15-19
AGATG 2930830 0.6764852 6.7949324 120-129
TATGT 2231715 0.6741573 8.202009 140-149
ACACT 2774490 0.67218137 6.680835 2
AATGG 2910245 0.6717338 6.212104 120-129
CATGG 3377695 0.66956985 7.085133 200-209
CCGTA 3279090 0.6659577 6.5027614 230-239
GACGA 3516500 0.6655239 11.308069 220-229
ACCTA 2736715 0.66302955 7.4594164 130-139
CGGCA 4074215 0.66222376 11.972257 70-79
GGATA 2865080 0.66130894 14.504526 35-39
TAATA 1914400 0.6586321 6.9040914 130-139
AATTA 1913795 0.6584239 5.74399 50-59
TGTTT 2080545 0.6582972 5.2415805 240-247
AGTAA 2384310 0.6565086 6.927757 50-59
CCGGC 4657660 0.65018415 10.301128 70-79
TTCAA 2197550 0.64931685 5.4630685 200-209
CACCG 3856670 0.6422308 9.243511 45-49
CTGCG 3747555 0.6380155 14.231966 25-29
GGTGC 3814615 0.6338933 7.523023 60-69
GGTTA 2618680 0.6331003 6.2436547 50-59
GACCA 3250885 0.6303366 5.36561 170-179
CCAGC 3776365 0.6288581 6.2365785 80-89
ATTAA 1807260 0.6217715 8.309365 110-119
GACCT 3004995 0.6102911 5.002284 2
ATCCA 2512910 0.6088079 5.093766 180-189
CCCGT 3477540 0.6065592 8.858441 140-149
GGGAT 3117950 0.60329086 10.001081 100-109
CACAA 2576945 0.5960546 7.947225 130-139
CTATC 2347870 0.595799 5.3210707 110-119
CCATT 2329360 0.5911019 5.1173315 110-119
GGTGA 3052675 0.59066087 5.6247005 120-129
GATCA 2469820 0.5840511 7.630428 110-119
CACGC 3476655 0.578949 10.60331 190-199
TTACC 2271160 0.576333 7.588196 45-49
GGGTT 2824005 0.5723286 5.8636346 100-109
ACATT 1921545 0.5677649 6.7384906 110-119
AACAT 2011935 0.567557 7.450742 110-119
ACCCG 3375300 0.56207085 8.168732 140-149
AGTTG 2314155 0.5594773 5.8959455 60-69
GCTTG 2687250 0.5579636 10.754658 90-99
AAGAT 2013770 0.55448216 6.5602984 120-129
AGGCA 2925575 0.5536869 7.0984936 80-89
TATCC 2165885 0.54961824 6.075122 170-179
GTACT 2188665 0.5421097 6.81616 2
TCAGG 2715010 0.5382039 5.2590494 150-159
GGGCA 3387840 0.5374844 9.00244 150-159
CATAA 1887505 0.5324559 7.808662 110-119
AATAA 1619855 0.53206396 6.133432 130-139
ACCCC 3115025 0.53144467 9.37106 140-149
TGTGG 2600575 0.527047 5.2164035 140-149
TTAGC 2125270 0.5264074 7.4262667 45-49
TGGCC 3087680 0.52567273 9.603898 4
CGGTT 2500435 0.5191746 10.340372 160-169
GTTTA 1708280 0.5160378 6.1466527 240-247
TGATT 1699885 0.5135019 5.6155005 50-59
GGGGA 3299920 0.51100904 7.556634 4
GTCCT 2399310 0.51038986 6.9708667 2
CACTT 2010900 0.510289 6.9895177 3
GCGAC 3112500 0.50590646 5.9229426 70-79
ATTCT 1633235 0.5054626 10.207449 2
TAGCT 1998415 0.49498677 10.159124 50-59
GGCCC 3509320 0.48988214 7.163091 70-79
GAGTT 2025380 0.4896622 5.505659 60-69
TGACG 2454640 0.4865901 7.7728176 220-229
GATTA 1685100 0.4859883 5.274169 50-59
CAAAC 2099495 0.48561916 8.419834 130-139
ACTTT 1565185 0.4844021 5.298355 45-49
GAGTA 2089360 0.48225966 5.3779135 110-119
CTTTG 1830605 0.47492486 5.4463296 45-49
GCCTT 2210460 0.47021705 17.619059 3
GGTTT 1840650 0.4661049 5.459588 100-109
AAGTG 2014655 0.46501648 5.9501133 120-129
CAATC 1909900 0.4627154 5.1047792 110-119
GGCAA 2427270 0.45937902 5.133608 80-89
AAATC 1623720 0.45804346 6.9282527 110-119
CCGCA 2733395 0.45517775 5.5941787 220-229
TGCGC 2620115 0.44607055 8.867894 25-29
CCGGT 2570235 0.43757856 8.2933 160-169
TCAAA 1547550 0.43655625 5.1145587 200-209
GCATG 2192120 0.43455002 8.871265 60-69
TACCT 1699350 0.43122965 6.543292 2
AACCT 1768935 0.4285635 8.226064 2
CGCGG 3120355 0.42516232 5.6826982 220-229
GCTAC 2075450 0.42150775 5.6449428 50-59
TAAAT 1221260 0.4201635 6.695578 130-139
TCCAC 1994615 0.41502112 5.3830137 180-189
CCCTA 1950420 0.40582544 6.5351458 110-119
TTCTT 1251535 0.40570068 13.028456 3
CATGC 1968690 0.39982563 7.230318 60-69
GCGCT 2346020 0.39940634 7.832352 25-29
ATTGT 1313970 0.39692456 8.281011 240-247
TTAAT 1100795 0.3966788 5.937909 110-119
GGTCA 1994830 0.39544067 5.2725263 160-169
CCGGG 2895645 0.39454457 5.32399 80-89
GCGTC 2307985 0.3929309 6.0321803 30-34
GACTT 1583395 0.3921906 8.02279 1
AGCTT 1552100 0.38443914 6.953187 1
CAGCG 2332945 0.37919736 6.956304 30-34
CGTCA 1849125 0.3755429 6.455902 45-49
ATGTG 1518425 0.3670992 6.0060787 140-149
CGCCT 2099230 0.36615178 5.3861938 2
CTCTT 1341045 0.35644415 5.9503326 1
CCTAA 1454980 0.35250098 6.1255617 110-119
CCGCG 2501300 0.3491679 5.735794 220-229
AACTT 1180625 0.3488429 9.719749 3
ATCCT 1363505 0.3460051 8.790091 2
GGTAA 1462720 0.33762053 5.690432 120-129
AGCGT 1672830 0.33160973 6.8294415 30-34
TAACT 1082385 0.3198157 5.125683 2
TGCTG 1520770 0.3157631 10.943384 1
ATGCT 1264950 0.31331506 5.4483404 2
TTCCT 1161180 0.30863675 8.366372 2
TAAAG 1104720 0.30417952 5.0835505 110-119
AATCT 1020930 0.30165732 9.193243 2
TTGTG 1168270 0.29583916 5.639131 240-247
CCCTT 1232185 0.26854026 5.529964 3
GTCTT 1028980 0.26695448 7.617398 3
TGCCT 1147100 0.24401525 8.843809 2
TGCTT 864940 0.2243966 8.69832 1
CGGGG 1668975 0.2219641 7.833108 3
TGTAA 745195 0.21491665 6.143803 25-29
TTGCT 446290 0.1157837 6.485856 4