FastQCFastQC Report
Sat 8 Jul 2017
HNCHNBCXY_s2_2_illumina12index_16_SL254626.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HNCHNBCXY_s2_2_illumina12index_16_SL254626.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 4386903
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[OK] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 20362 0.464154324816391 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 13568 0.3092842490476767 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 11523 0.26266821947054675 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11264 0.2567642822282599 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10523 0.23987309498295267 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10327 0.23540525058338424 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9885 0.22532980555986762 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9807 0.2235517858498353 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9632 0.21956263906450632 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9331 0.21270130659374048 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9292 0.21181229673872431 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 9231 0.2104217941449811 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8931 0.20358325679870284 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8931 0.20358325679870284 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8733 0.19906982215015923 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8719 0.19875069040733293 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8689 0.19806683667270508 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8675 0.19774770492987878 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8563 0.19519465098726824 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8515 0.19410048501186372 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8390 0.19125109445091446 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8323 0.18972382111024566 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8182 0.18650970855749488 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8153 0.18584864994735467 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8140 0.18555231332901592 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8136 0.18546113283106555 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8038 0.18322721063128133 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7945 0.1811072640539351 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 7805 0.17791594662567192 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7755 0.17677619040129222 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7609 0.1734481022261035 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7510 0.17119138490183167 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7405 0.1687978968306343 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7362 0.16781770647766775 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7342 0.16736180398791586 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7241 0.16505949641466885 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7110 0.16207333510679403 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7062 0.1609791691313895 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 6965 0.15876804205609288 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6954 0.15851729568672934 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 6944 0.1582893444418534 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 6876 0.15673927597669698 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 6849 0.15612380761553196 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 6737 0.15357075367292142 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5949 0.1356081955766973 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5910 0.1347191857216811 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5727 0.13054767794045138 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 5607 0.1278122630019401 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5476 0.12482610169406527 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5428 0.12373193571866076 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5349 0.12193112088414082 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5001 0.11399841756245807 No Hit
TAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 4782 0.10900628529967496 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 8563755 7.4180818 67.217224 35-39
TATTA 4443090 7.0592475 126.329704 240-247
TGGAT 6637710 7.0128765 81.98124 35-39
TCACC 6877550 6.368675 72.057755 160-169
TCTCC 6144130 6.0168533 89.439964 20-24
TCCCT 6100905 5.9745235 74.94189 10-14
CTGTG 6298760 5.7700043 88.144936 25-29
AGTGG 6430360 5.3872685 42.78333 100-109
TTACT 3748010 5.163179 100.1034 240-247
CTGAG 5886325 5.0988426 56.576576 15-19
CCTGA 5447115 4.8785176 58.00442 15-19
CTCTG 5080605 4.8120537 80.907 35-39
TGTAT 3608190 4.8074174 53.57967 240-247
CTCCA 5154220 4.7728558 42.12774 80-89
TGGGT 5344150 4.7348447 44.02496 100-109
ATTAC 3615690 4.709924 100.390305 240-247
GACAC 5456050 4.620681 50.515156 230-239
ACACG 5325110 4.509789 54.03536 230-239
GAGAC 5483475 4.49148 89.11628 8
TTCAC 3951115 4.462575 71.630585 40-44
AAGGG 5578170 4.419076 44.717186 90-99
TGAGA 4415420 4.4111943 99.424904 15-19
ATTCA 3352530 4.3671227 109.563255 40-44
CCCTG 5535160 4.29828 93.88184 10-14
TACTG 3912425 4.2738366 72.81646 240-247
TCTGG 4659890 4.268711 141.1948 35-39
CCAGG 5901875 4.191474 55.246986 80-89
GAAGG 5256140 4.1639605 36.50261 90-99
GGGTC 5675710 4.1228423 128.35558 8
CTGGG 5526795 4.01467 137.95993 5
ACCAT 3703675 3.9555335 65.45176 160-169
CACCA 4508770 3.948023 56.31675 160-169
ACTGG 4556205 3.946668 47.322834 60-69
TCCAG 4387145 3.9291928 42.204327 80-89
GACTC 4383790 3.926188 58.37552 20-24
CAGCC 5312565 3.9009917 54.470524 30-34
TGGAG 4642500 3.8894236 39.505947 90-99
TACTA 2979505 3.8812075 29.79758 130-139
AGCCT 4272660 3.8266582 52.917995 30-34
AGACT 3702630 3.8246217 77.32935 15-19
CAAGA 3904455 3.8136864 45.950615 180-189
ACTAC 3528045 3.76796 29.258432 130-139
GATTC 3442805 3.760835 61.673412 40-44
TCAGT 3414165 3.7295501 58.779007 7
AGACA 3731765 3.6450102 35.881832 170-179
CACCT 3906750 3.6176865 42.75011 20-24
CCTGT 3806050 3.6048694 65.79232 25-29
ACTCT 3181125 3.592912 74.74458 20-24
GAGTG 4266725 3.5746043 42.287323 100-109
ACTGT 3257015 3.557883 57.449173 240-247
TGAAG 3488810 3.4854712 39.648663 150-159
GCTGG 4752445 3.4521813 35.064793 90-99
TATCT 2457580 3.38551 45.871033 200-209
GGTCC 4499080 3.3790464 139.58493 9
GGAGT 4023380 3.3707333 38.01174 90-99
GGATT 3178570 3.3582242 59.65251 40-44
GTCCC 4299845 3.3390064 79.923256 10-14
GGCTG 4514515 3.2793489 36.854153 90-99
GTATT 2453730 3.2692583 59.51649 240-247
AGGGA 4111115 3.2568614 43.018753 80-89
TCCTG 3371045 3.1928577 63.894913 25-29
GGACA 3897840 3.1926968 24.192572 220-229
CCTCA 3441290 3.1866667 50.47319 5
CTCCT 3192310 3.126181 96.68443 20-24
GTCTC 3277340 3.104106 36.00819 30-34
CCATC 3335170 3.088398 39.222992 45-49
AAGAA 2712915 3.0561702 35.51903 180-189
CTGCA 3382815 3.0296998 47.217 25-29
GGAAG 3806400 3.0154638 32.721195 80-89
CATCT 2555420 2.8862114 33.11359 170-179
GGGAA 3598590 2.8508348 36.265976 80-89
ATCTC 2521825 2.8482678 47.92318 170-179
ATGAA 2368300 2.821446 28.760635 210-219
CAGGG 4067825 2.7941198 39.087646 80-89
AGTAG 2780640 2.777979 29.525114 50-59
CCCTC 3400280 2.730066 33.580345 20-24
CGCCA 3640030 2.6728573 41.627842 70-79
GAGTC 3062155 2.6524942 28.523932 160-169
GTGTA 2510325 2.6522095 25.97159 230-239
GACAA 2714880 2.6517656 27.432224 180-189
GAACA 2703705 2.6408503 34.641327 210-219
CCAAG 3100310 2.6256254 40.307114 180-189
TGTGC 2862195 2.6219249 59.122948 25-29
CTGTC 2759580 2.6137137 49.22295 30-34
CCGCC 4100305 2.6105387 35.691517 70-79
GTGAA 2604450 2.6019576 38.060104 150-159
CACGG 3622115 2.572403 48.247303 230-239
CACTG 2808725 2.515536 21.811102 30-34
TCTGT 2160280 2.4956038 24.828342 210-219
ACGGC 3508845 2.491959 51.3762 230-239
AGAAC 2544060 2.4849164 31.600632 190-199
TGAAC 2392995 2.471838 37.2253 210-219
GGGGG 4366960 2.4328604 104.390495 7
AGCTG 2801990 2.427135 27.469057 60-69
ATCTG 2220355 2.425461 34.534813 200-209
CTACT 2136385 2.4129338 21.916647 60-69
CTCTC 2463920 2.4128795 101.4295 20-24
GGGCT 3310165 2.4045076 43.46852 90-99
TATAT 1513100 2.4040358 26.215078 240-247
AAAAA 1784175 2.3967881 12.627622 200-209
ACCTT 2109840 2.3829527 53.40285 40-44
GTGGA 2837015 2.3768127 27.711107 100-109
GTATC 2160940 2.3605576 21.776417 200-209
ACAAC 2317955 2.3409033 21.750595 180-189
TGCAA 2265330 2.3399668 35.47108 200-209
TCTAT 1689765 2.3277843 18.885075 110-119
CAAAT 1882135 2.3183541 36.949623 200-209
AGGCT 2676000 2.318 21.942081 80-89
TCCAA 2147375 2.2934015 41.277092 180-189
AAATG 1920530 2.2880008 36.34781 200-209
AATGA 1910035 2.2754974 27.491318 210-219
CAGTG 2607890 2.259002 46.525345 8
CTACA 2103040 2.2460515 14.208456 140-149
CTCAC 2406680 2.228608 59.530746 20-24
AGGGC 3220425 2.2120552 31.123278 150-159
GCCTC 2829075 2.196893 48.253902 30-34
CTATG 2003905 2.1890163 19.803045 50-59
TGGGG 3110245 2.1851292 130.27545 6
GTGGG 3106390 2.182421 30.859165 100-109
GCTCC 2805065 2.1782484 34.915447 80-89
GGCCG 3654250 2.1763272 21.658258 230-239
TGGTG 2453065 2.173382 35.282932 35-39
GCAGC 3055875 2.1702626 36.882267 30-34
GAGCT 2505370 2.1701972 24.206007 60-69
GTAGT 2054010 2.1701035 23.048014 120-129
CAGGC 3016210 2.142093 31.91073 70-79
TCCGC 2752580 2.1374915 43.219254 70-79
TGCAG 2462005 2.132634 46.78854 30-34
CTATT 1542355 2.1247153 17.509037 110-119
CCTCT 2163700 2.1188786 50.705257 35-39
TCTCT 1764990 2.1081514 39.64507 35-39
CAGTA 2040345 2.107569 21.889372 50-59
TGTGA 1985740 2.0979748 19.617796 210-219
CTTCA 1849595 2.0890195 49.536022 45-49
ACAGC 2456995 2.0808077 26.206245 210-219
GGCTC 2767450 2.0785012 19.34542 80-89
AGAGT 2080070 2.0780795 26.597197 150-159
AGAGA 2190390 2.0692449 31.35029 170-179
ATCAG 2000580 2.066494 26.707539 45-49
GCTGT 2246590 2.0579977 20.280321 230-239
TGTCT 1772395 2.0475104 49.180416 30-34
CAGAG 2480220 2.0315328 34.608807 170-179
CCTTC 2067285 2.0244608 52.02695 45-49
CATAT 1549205 2.0180485 14.481429 170-179
GCCTG 2653410 1.9928511 27.100065 210-219
CAGAC 2347375 1.9879712 24.613344 140-149
ATATC 1520650 1.9808521 15.525552 170-179
GCCAG 2767710 1.9656101 36.493683 70-79
CCAGA 2319590 1.9644403 35.84116 170-179
AACAG 2007165 1.9605032 33.119858 210-219
GCAGA 2390735 1.9582361 23.011751 140-149
TCCAT 1727500 1.9511198 32.298378 45-49
GTGGT 2196010 1.9456352 25.040277 120-129
GCCGA 2732455 1.9405724 19.898886 220-229
ACCTG 2151580 1.9269872 36.54658 25-29
ACTAT 1456815 1.8976982 15.138343 50-59
ACCCT 2046735 1.8952954 43.74114 10-14
TTCAG 1729350 1.8890991 45.94547 45-49
GGGGC 3277600 1.8879389 32.16825 90-99
TGACC 2106335 1.8864651 15.073941 210-219
TAGTA 1496170 1.884993 17.138515 120-129
GGTGG 2648360 1.860628 19.658516 40-44
TGCAC 2072150 1.8558486 25.180262 25-29
ATGGA 1853250 1.8514764 12.4659605 120-129
TACAA 1500875 1.8487303 17.382235 140-149
CTGTA 1688235 1.8441863 23.470161 190-199
TGGGA 2186510 1.8318285 14.499758 120-129
ATTGG 1733640 1.8316259 20.796946 100-109
TATCA 1402580 1.8270497 14.664673 170-179
GTGCA 2090435 1.810773 54.271343 25-29
AGGGG 2721880 1.8082471 36.44027 90-99
AAGAG 1880020 1.776041 20.722355 150-159
CCTGC 2269530 1.7623833 40.840096 20-24
GGTCT 1923140 1.7616999 26.235033 15-19
AACTA 1420385 1.7495854 27.680704 130-139
GTCAC 1949960 1.7464134 33.74612 160-169
TATGC 1594155 1.7414155 13.47943 50-59
GGATC 2009010 1.7402412 20.14691 70-79
ATACT 1335655 1.7398709 25.577444 130-139
TTATT 1035475 1.7398291 29.324099 240-247
GAGGA 2184170 1.7303187 25.286701 220-229
TAGTG 1610670 1.7017058 24.997078 120-129
AGGAC 2074980 1.6996031 18.557562 230-239
GATGG 2023310 1.6951017 17.973516 100-109
CTGAA 1630730 1.6844583 22.549974 200-209
TACAT 1285500 1.6745373 11.954252 190-199
GGGCC 2805435 1.6708065 20.815647 150-159
ACAAT 1349225 1.6619326 23.28618 180-189
CAGTT 1511600 1.6512346 23.946218 190-199
CCTGG 2189660 1.6445504 48.00235 4
GTCCG 2184615 1.6407614 36.680786 70-79
AGTCA 1585810 1.6380581 28.691666 160-169
ACCAG 1924955 1.6302274 14.217477 190-199
TTCCA 1432070 1.6174471 20.483414 180-189
CTCAG 1805920 1.617409 48.41504 6
GCAAA 1655465 1.6169794 32.29261 200-209
CGATT 1469705 1.6054695 34.867092 160-169
AACAC 1586405 1.6021109 21.051634 190-199
CCGTG 2131425 1.6008128 16.491549 150-159
CTGGT 1733545 1.5880209 33.171932 35-39
CGTCC 2040110 1.5842294 19.422987 180-189
TCTGC 1672395 1.5839953 32.230507 200-209
CTCCC 1963120 1.5761782 12.134689 190-199
CATGA 1523385 1.5735765 22.14931 60-69
AGTGA 1566865 1.5653656 53.46332 9
AGTTC 1428215 1.5601467 20.813337 190-199
TGAGC 1797985 1.5574474 12.52617 60-69
GGGGT 2214165 1.5555806 127.80547 9
ATCCG 1736710 1.5554235 24.802538 70-79
AGCAC 1836345 1.5551844 18.800451 130-139
ATATT 972730 1.545488 27.85829 240-247
TTCTC 1289045 1.53967 21.648697 190-199
TTCTG 1327430 1.5334768 29.270353 30-34
GGATG 1828660 1.5320266 19.38453 100-109
ATTAT 954260 1.5161425 13.507673 240-247
ATGCA 1465640 1.513929 15.375795 60-69
CATCA 1417040 1.5134019 32.30168 45-49
GTGAC 1744690 1.5112823 15.333935 210-219
TGTCC 1592830 1.508636 60.053085 15-19
TCTCA 1332450 1.5049316 25.362667 100-109
GAACT 1456045 1.5040177 14.946411 190-199
GCACT 1676870 1.5018299 24.048805 25-29
GTTCT 1290320 1.4906065 21.205326 190-199
GAGAG 1860580 1.4739678 26.588614 220-229
TCAGC 1627745 1.4578328 9.040118 45-49
GCTAT 1333550 1.4567373 20.055311 50-59
TCCGT 1536810 1.4555771 13.90332 150-159
CAAGG 1775340 1.4541701 14.017034 25-29
CAACC 1656585 1.4505588 16.304821 140-149
CTCAA 1356250 1.4484781 20.336287 150-159
GCTGA 1668970 1.4456924 18.801695 200-209
GTCCA 1612910 1.4445463 27.877895 180-189
GCCGT 1920935 1.4427238 25.050953 230-239
AGAGC 1758920 1.4407203 23.70958 220-229
ACTCC 1553875 1.4389025 17.532108 140-149
TCGGA 1660325 1.4382039 98.97988 7
TTAGT 1071355 1.4274333 22.71401 110-119
CCATA 1326925 1.417159 14.310202 160-169
GGACT 1635735 1.4169035 15.715089 90-99
TTTAT 842070 1.4148655 14.425378 240-247
CACAG 1657160 1.4034343 11.0226145 140-149
AGACC 1655910 1.4023756 95.7434 9
TGGTA 1325460 1.4003755 22.169857 120-129
GGAGC 2030100 1.3944414 9.600895 60-69
TCTGA 1275600 1.393434 15.253157 220-229
CGGCC 2247925 1.3842093 28.301579 230-239
CTTTA 1004225 1.3833991 38.737118 45-49
CACGT 1534465 1.3742898 18.305248 180-189
CAACT 1283185 1.3704445 15.202101 130-139
CAATT 1048750 1.3661385 21.938873 180-189
TGGAA 1364110 1.3628045 18.645754 120-129
ATCTA 1044585 1.360713 18.74149 110-119
CGGCT 1803490 1.3545163 24.9365 230-239
GCACA 1599120 1.3542807 13.244812 130-139
TCACT 1197080 1.3520385 15.531396 190-199
AGTCG 1560595 1.3518159 16.241133 150-159
AACCC 1540310 1.3487446 19.771065 140-149
AGTTA 1069065 1.3468922 18.059225 50-59
TGTGT 1205135 1.3465029 18.43889 240-247
CCATG 1496605 1.3403819 12.305235 160-169
TCAAG 1291335 1.3338813 23.675264 150-159
CTTCG 1407060 1.3326855 108.90044 5
AATTC 1020820 1.329756 21.810501 180-189
GTTAC 1210510 1.3223313 14.857848 50-59
GATTG 1247795 1.3183209 24.177755 100-109
GGAGA 1663765 1.3180494 89.99186 9
GTCGA 1515850 1.3130571 12.3696165 160-169
GTGGC 1806825 1.3124797 16.084316 40-44
ATACA 1064025 1.3106323 17.039999 35-39
CGACA 1516655 1.2844418 12.318792 70-79
ACATA 1034190 1.2738825 19.581543 130-139
AACCA 1259740 1.2722118 18.61361 190-199
TTCGG 1387545 1.271066 104.82827 6
ACGTC 1415825 1.2680341 20.210642 180-189
TTGGG 1427985 1.2651752 13.656151 100-109
CCGAT 1399540 1.2534491 25.988081 160-169
GACCC 1698560 1.2472447 47.947075 10-14
ACAGT 1206670 1.2464266 11.957088 120-129
TACGC 1391130 1.2459168 22.518467 140-149
GATCC 1385615 1.2409773 24.621899 70-79
TCGAG 1406750 1.2185526 12.214595 160-169
GGCCT 1612645 1.2111816 41.927513 3
TGGAC 1396050 1.2092841 11.298948 80-89
CCTTT 1008975 1.2051468 41.987286 45-49
GGCAG 1753980 1.2047791 10.176104 70-79
TTACA 923405 1.2028596 8.276393 120-129
CCAGT 1315780 1.1784322 17.485683 190-199
GCCAA 1380880 1.1694552 16.71199 180-189
GAGCA 1423455 1.165943 7.5758967 130-139
CTACG 1281410 1.14765 13.463961 140-149
GGCTT 1245315 1.1407758 13.225089 25-29
AAGCT 1103020 1.1393616 13.232854 200-209
AGCTA 1102310 1.1386281 18.642027 50-59
CCTAC 1225530 1.134852 12.3904505 190-199
GAACC 1339575 1.1344743 10.901348 190-199
TTATA 713015 1.1328489 12.478461 110-119
ACACA 1120165 1.1312549 7.102715 130-139
GGGAG 1700575 1.129756 9.226743 5
CGCAG 1587430 1.1273828 15.16085 140-149
CCGTC 1451065 1.1268116 9.745799 140-149
GTAGA 1127090 1.1260114 15.971025 170-179
GCCCC 1763770 1.1229384 13.74827 80-89
ACAGA 1142730 1.1161644 14.509763 140-149
GAGCC 1564415 1.1110374 18.343151 220-229
CGTGT 1211240 1.1095613 17.439064 230-239
CGCTG 1473655 1.1067928 9.649335 190-199
ATTCC 979255 1.1060166 20.103323 180-189
TAGTT 829670 1.1054213 17.293732 50-59
CCAAC 1260425 1.1036683 12.512109 130-139
ACATG 1066645 1.1017882 9.812521 190-199
AACTG 1063000 1.098023 14.835905 60-69
AGATC 1062870 1.0978887 7.881482 210-219
ACCGC 1492105 1.0956458 14.866944 220-229
GGGAC 1592700 1.0939987 12.458673 90-99
TAGAC 1058940 1.0938293 16.354202 170-179
GGGTG 1551905 1.0903041 10.867214 60-69
TGGCT 1189765 1.0898888 31.431555 40-44
GAAGT 1082760 1.0817238 8.9849825 140-149
TTTCA 782350 1.0777487 8.382788 100-109
CTATA 826960 1.077227 11.305216 50-59
TAGCA 1040830 1.0751226 8.960205 50-59
ACCAA 1063460 1.0739886 15.939354 130-139
ATTAG 852420 1.0739459 22.595016 110-119
AGCAG 1306295 1.069978 11.534518 50-59
CCCCA 1406030 1.067479 17.857319 80-89
ACACC 1217165 1.0657885 12.714122 40-44
GTCTG 1160065 1.0626823 20.924028 3
CTTCT 889465 1.0624008 18.305716 30-34
ACTCA 991195 1.0585984 13.744499 190-199
AGCCC 1437210 1.0553366 15.300203 80-89
GTATA 837125 1.054676 10.383644 240-247
CGAGT 1211645 1.049549 17.184586 160-169
CAGCT 1169385 1.0473187 8.445151 50-59
CATTA 799415 1.041346 12.648949 110-119
TGAGT 982885 1.0384381 15.003556 90-99
CGTAT 950270 1.0380516 8.041232 110-119
CTCCG 1336445 1.0378046 9.898521 150-159
ATCAT 794660 1.035152 8.348966 110-119
TATTT 613990 1.0316403 11.982416 240-247
GTGCG 1419335 1.0310066 12.857821 240-247
AACTC 965325 1.0309693 16.270298 190-199
ATATA 682850 1.0258998 11.980333 130-139
CGAGG 1482080 1.0180155 16.097637 220-229
GACTG 1171140 1.0144628 15.0225525 90-99
GATCT 920530 1.0055642 7.0406547 220-229
CGGAG 1456285 1.0002975 78.3623 8
ATCAA 807105 0.99416643 10.717491 110-119
AGCCG 1391825 0.98846525 19.35382 220-229
CGTGA 1136170 0.9841713 19.646599 150-159
ATGAG 983230 0.9822891 17.20398 60-69
TGCGA 1132855 0.98129976 9.958377 240-247
CCCAG 1329340 0.9761283 15.293856 80-89
GCAAG 1191170 0.9756799 15.131323 25-29
CACAT 909655 0.9715136 12.27449 130-139
ATGAC 939350 0.9702991 7.652736 160-169
TACCA 905515 0.96709204 8.830584 130-139
GTTTC 835065 0.96468574 5.7523103 100-109
GCTTC 1014210 0.96060073 25.04234 2
TATAC 732650 0.9543755 9.438113 130-139
CCGAG 1336950 0.94949347 17.858692 220-229
GACAG 1157135 0.947802 11.875202 70-79
AGCTC 1058065 0.94761884 11.02462 210-219
ATAGT 749200 0.94390124 15.3834095 120-129
TTTAG 707685 0.9428931 30.025173 45-49
CCCCT 1173720 0.94237334 9.373886 140-149
TGAGG 1124460 0.9420574 7.7083135 220-229
GCTCT 994610 0.94203675 13.803606 210-219
TACAG 911855 0.9418982 5.945626 120-129
ATGGG 1114805 0.93396854 14.93821 100-109
GAAGC 1136320 0.9307526 10.758636 200-209
ACGCA 1095715 0.9279514 18.3181 140-149
AGGCC 1295950 0.92037535 9.860162 70-79
TATTG 688970 0.9179579 10.134098 240-247
GTCTA 837655 0.9150337 7.313794 30-34
CCTCC 1138320 0.91395086 10.705222 140-149
AGTCT 834385 0.91146153 11.966506 8
CGCCG 1475110 0.9083316 12.07017 220-229
AAGGC 1106200 0.9060816 20.440184 25-29
GATGA 900490 0.8996283 7.7913427 60-69
ACAAG 919735 0.89835334 11.94371 80-89
GCAGT 1033070 0.8948641 6.8831153 50-59
CATAC 825390 0.8815184 12.524328 130-139
CTGAC 983060 0.8804432 8.970998 220-229
CAGCA 1033105 0.8749275 7.702454 45-49
TACAC 813790 0.8691296 16.15377 35-39
GCCAT 970320 0.86903316 6.9008837 60-69
GACCG 1222575 0.868265 9.9741745 220-229
TTGAG 814205 0.8602242 14.622385 90-99
GCACC 1169875 0.85903376 10.767319 130-139
CGTCT 903650 0.85588473 6.5278783 35-39
GATAC 826845 0.8540873 19.972006 35-39
GAAGA 902050 0.85215986 5.233205 15-19
AGGTC 969450 0.8397552 15.058044 15-19
TTTCT 574305 0.8366672 9.689455 4
CTTGA 765330 0.8360276 15.527974 90-99
AATAC 678145 0.83531755 11.429743 130-139
ATGGT 790105 0.8347621 7.8947825 120-129
GTAGC 957870 0.8297245 9.492484 50-59
TCTTC 689695 0.8237903 33.45079 4
TTGGA 774220 0.81797916 8.212717 60-69
TCATA 627365 0.8172276 6.734616 120-129
ATGAT 647320 0.8155448 7.4169536 120-129
CGGAC 1147150 0.81469864 11.542535 220-229
ATTAA 536355 0.80580854 8.095827 110-119
AATCA 652210 0.80337167 10.336066 110-119
TTATG 602405 0.8026219 10.163162 50-59
GGTTC 871605 0.7984372 9.524934 160-169
AAACT 647845 0.797995 10.964355 130-139
TATGG 754455 0.7970971 9.942781 35-39
CAACG 931050 0.78849804 15.881456 180-189
ATTTA 495925 0.787933 7.4857817 110-119
ACAAA 675365 0.7866361 11.676419 130-139
TAACA 637170 0.7848459 6.4843264 120-129
ACTTC 694415 0.784305 33.07034 4
TGGTT 700125 0.78225285 8.75563 35-39
GGTAT 740000 0.7818251 9.196723 110-119
AAGGT 776445 0.775702 17.647581 15-19
CCCCC 1174835 0.77336544 14.027764 80-89
GAAAT 645335 0.7688121 5.9487 110-119
CCGTA 853720 0.7646044 6.4148746 230-239
TGATG 723145 0.76401746 12.283209 120-129
ACAGG 931565 0.7630392 11.351774 70-79
TGGCA 880780 0.76294774 5.0752735 100-109
TCCGG 1014995 0.7623149 12.928949 70-79
ATAAA 535575 0.7608625 8.832296 110-119
GTTCA 694785 0.758966 11.265733 160-169
AACGC 894315 0.7573876 15.305806 180-189
ACGCC 1028880 0.7555018 13.928863 180-189
GTTAT 565420 0.7533445 8.136552 50-59
AGAAG 796925 0.75284904 10.079087 140-149
TATGA 595585 0.7503649 5.1835165 50-59
TATAG 594545 0.7490546 7.284363 120-129
TACTT 542055 0.7467234 12.97117 3
AAATA 524230 0.7447453 12.470501 130-139
TTCAT 538955 0.7424529 5.245728 40-44
GAGAT 741545 0.74083537 7.23405 210-219
CAGTC 820285 0.7346595 5.7606025 210-219
CAGAA 751075 0.73361427 12.217007 140-149
ATTTC 528390 0.72789884 6.3469043 240-247
TCCTT 609355 0.72783 12.239281 3
TCAAT 558530 0.72756076 7.088335 110-119
AAGTT 575175 0.7246508 11.564077 140-149
AGTAC 691920 0.7147169 5.27634 130-139
TGACT 653070 0.7133976 5.5831294 40-44
ACGCT 793860 0.7109929 11.733473 190-199
TCAAC 663805 0.7089453 6.0442734 110-119
GCCGC 1147790 0.70677704 12.111537 220-229
GCGGA 1023160 0.7027913 10.073196 220-229
TCATC 620170 0.70044917 5.696718 110-119
CATGG 807785 0.6997181 7.2726197 200-209
GGTAG 834950 0.6995098 9.318383 120-129
GCCTA 775280 0.6943524 12.030545 190-199
ATGCC 767790 0.6876442 7.2160273 50-59
TTTAC 498900 0.68727404 10.703359 45-49
TGCCA 766555 0.6865381 6.604442 60-69
ACACT 637295 0.68063253 6.4808245 2
ACGAC 803220 0.68024 9.484637 220-229
AGTAT 539645 0.67988724 7.348823 110-119
TATGT 506340 0.67462844 8.301844 140-149
AGATG 674920 0.67427415 6.7912564 120-129
ACCTA 629340 0.67213655 7.783482 130-139
GGTGC 920915 0.6689537 8.017533 60-69
GGATA 669130 0.66848963 14.820084 35-39
GACCA 781910 0.6621927 5.418127 170-179
TGTTT 467645 0.65891963 5.0381904 240-247
GACGA 803115 0.6578265 11.177697 220-229
CGGCA 921205 0.65423393 11.929192 70-79
CTGCG 868325 0.65215796 14.649772 25-29
CACCG 887000 0.65132 8.944428 45-49
AATGG 651505 0.6508815 6.1773252 120-129
CCGGC 1056555 0.6505971 10.315119 70-79
GGTTA 615200 0.6499713 6.27758 50-59
ATCCA 605730 0.646921 5.444462 180-189
ATCTT 467195 0.6435979 11.99812 3
CCAGC 873280 0.6412454 5.911873 80-89
AAGAT 534695 0.6370025 6.6271677 120-129
AATTA 422975 0.6354689 5.606454 50-59
CACAA 607945 0.6139638 7.8736944 130-139
AGTAA 514805 0.61330676 6.388483 50-59
CTATC 535850 0.60521424 5.5897174 110-119
CCCGT 777300 0.60360545 9.045205 140-149
GATCA 583750 0.60298294 7.5346155 110-119
GGGAT 719220 0.6025528 10.289474 100-109
TAATA 399860 0.6007414 5.5655117 130-139
GGTGA 710165 0.59496665 5.586104 120-129
GGGTT 660585 0.5852694 6.155359 100-109
TTACC 509325 0.5752556 7.322686 45-49
GCTTG 626215 0.5736468 11.341066 90-99
TCAGG 655690 0.5679707 5.4714446 150-159
GGGCA 822915 0.5652464 9.351253 150-159
TATCC 499220 0.56384254 5.977232 170-179
ACATT 432445 0.56331795 7.036043 110-119
TGTGG 634610 0.5622558 5.333177 140-149
AACAT 447220 0.55087143 7.3188944 110-119
ACCCC 722900 0.5488365 9.21039 140-149
ACCCG 745215 0.5472079 8.144933 140-149
GGCCC 878365 0.5408726 7.531793 70-79
GGGGA 813710 0.5405781 7.5326715 4
CATAA 435490 0.5364228 7.5293107 110-119
GTACT 489115 0.5342972 6.510017 2
TGGCC 710050 0.533285 10.08794 4
AGTTG 502300 0.5306902 5.5543494 60-69
CAAAC 522995 0.5281728 8.632575 130-139
GCGAC 742300 0.52717674 6.1057734 70-79
GTCCT 552455 0.52325326 7.7591367 2
CACGC 710660 0.5218343 9.415268 190-199
CTTTG 448565 0.5181923 5.3393817 45-49
GAGTA 515825 0.5153313 5.535417 110-119
AGGCA 627090 0.51364547 6.1650486 80-89
GTTTA 384545 0.5123534 5.617007 240-247
TAGCT 466715 0.50982803 10.239112 50-59
CACTT 451195 0.5096009 5.866216 3
TCCAC 550000 0.50930506 5.758186 180-189
TGACG 583820 0.5057156 8.072707 220-229
GGTTT 442680 0.4946084 6.0005836 100-109
GCGTC 658130 0.4942904 5.7610464 30-34
GAGTT 466685 0.49306217 5.0818634 60-69
TTAGC 450655 0.4922844 7.3041043 45-49
CGGTT 535335 0.49039578 9.481941 160-169
TGATT 365590 0.48709846 5.204491 50-59
ATTCT 352675 0.48583758 9.388576 2
TGGTC 522910 0.47901374 5.59158 6
AAGTG 478355 0.47789723 5.9363184 120-129
TGCGC 620835 0.4662799 9.526479 25-29
GCCTT 486180 0.46048144 15.684358 3
AACCT 427140 0.4561865 7.401381 2
AAATC 367790 0.4530321 6.4749513 110-119
AGCGT 521200 0.45147297 6.394987 30-34
GGTCA 514015 0.4452492 5.061036 160-169
CCGCA 605790 0.44482884 5.6523848 220-229
GCTAC 495960 0.4441892 6.0429792 50-59
CCCTA 465180 0.430761 6.8225193 110-119
CGCGG 718460 0.4278865 5.531195 220-229
TACCT 374505 0.42298353 6.3139224 2
CCGGT 559135 0.41993994 7.639349 160-169
GCATG 483425 0.41875157 8.271293 60-69
ATTGT 307805 0.41010785 8.183539 240-247
TTCTT 278930 0.40635476 12.567867 5
TGGGC 557780 0.40517202 5.127334 1
GACTT 366605 0.40047026 7.4259515 1
GCGCT 529360 0.39757735 8.454852 25-29
GTGTC 433830 0.39741167 5.417429 30-34
AGCTT 363750 0.39735153 7.535216 1
TTAAT 248645 0.39505085 5.7988563 110-119
ATGTG 367620 0.38839805 6.1206555 140-149
CCGGG 651065 0.3877487 5.2998714 80-89
CCTAA 348955 0.37268475 6.4745836 110-119
CATGC 415405 0.37204292 6.25004 60-69
ATCCT 328785 0.37134522 8.48272 2
CTCTT 307310 0.36705932 7.078369 1
CAGCG 511260 0.36309358 6.2572856 30-34
TAAAT 241665 0.3630725 5.4769998 130-139
AACTT 277630 0.36165056 10.624743 3
CGTCA 393795 0.3526887 5.656461 45-49
CCGCG 551990 0.33990002 5.5390687 220-229
GGTAA 331890 0.33157238 5.779473 120-129
TAAAG 278175 0.3314005 5.2272224 110-119
TAACT 249975 0.32562616 6.5324883 2
CCCTT 325085 0.31835082 5.3620105 1
TGCTG 347430 0.31826466 10.65036 1
TTGTG 284100 0.31742623 5.7738166 240-247
TTCCT 265380 0.316977 8.374865 2
AATCT 238160 0.31023556 7.901399 2
ATGCT 275530 0.3009822 5.5225883 2
GTCTT 246230 0.2844504 9.639233 1
TCCTA 242020 0.27334875 6.167476 9
CGCTT 276580 0.2619605 5.667889 1
TGCCT 264855 0.25085527 9.229326 2
CGGGG 397785 0.22912918 7.403957 3
TGTAA 181795 0.22903967 6.137231 25-29
TGCTT 196935 0.22750372 8.034358 1
TTGCT 105440 0.121806644 5.131318 4