FastQCFastQC Report
Sat 8 Jul 2017
HNCHNBCXY_s2_2_illumina12index_3_SL254630.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HNCHNBCXY_s2_2_illumina12index_3_SL254630.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 2898577
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 13666 0.47147272609973795 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 8091 0.27913696962337037 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7531 0.2598171447575828 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7514 0.2592306500741571 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 7360 0.25391769823606547 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7185 0.24788025296550686 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 6413 0.22124649440052827 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6316 0.2179000247362758 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6229 0.21489855194462665 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5884 0.20299615983981104 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5810 0.20044318298254626 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5739 0.19799370518706247 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5722 0.1974072105036368 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5688 0.1962342211367854 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5665 0.1954407283297977 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5658 0.19519923051897536 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5581 0.19254275459992953 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5573 0.19226675710184687 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5551 0.1915077639821195 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5446 0.18788529681978433 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5323 0.18364183528676312 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5256 0.18133035624032068 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 5193 0.1791568759429196 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5097 0.17584490596592742 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5033 0.17363692598126598 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5011 0.1728779328615386 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4966 0.17132544693482354 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 4860 0.16766848008522803 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4839 0.16694398665276097 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 4773 0.16466700729357886 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 4771 0.1645980079190582 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4765 0.1643910097954962 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 4762 0.1642875107337152 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 4732 0.16325252011590516 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4698 0.16207953074905376 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 4612 0.15911255764466495 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 4540 0.15662858016192083 No Hit
AAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTT 4483 0.15466209798808173 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 4480 0.15455859892630075 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4466 0.15407560330465603 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 4456 0.1537306064320527 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4361 0.15045313614232086 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4014 0.13848174466298463 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 3869 0.13347929001023606 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 3729 0.12864933379378915 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 3672 0.12668285161995008 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 3656 0.1261308566237847 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 3572 0.12323288289391658 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 3373 0.1163674451291099 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 3317 0.11443546264253114 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 3226 0.11129599110184067 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 3184 0.1098470042369066 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 3071 0.10594853957648874 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 5593875 7.3557076 64.85859 35-39
TGGAT 4381715 7.0493855 79.596886 35-39
TATTA 2850375 6.832175 122.93459 240-247
TCACC 4503430 6.2745357 69.84148 160-169
TCCCT 4003645 5.938287 71.67968 10-14
TCTCC 3958980 5.872039 86.50468 20-24
CTGTG 4012070 5.616266 84.3234 25-29
AGTGG 4190595 5.3533316 42.59574 100-109
TTACT 2450220 5.1101556 98.23389 240-247
CTGAG 3809530 5.00937 54.74038 15-19
CCTGA 3516965 4.7603946 55.965588 15-19
CTCTG 3287035 4.736382 80.17159 35-39
TGTAT 2318095 4.6967454 52.5351 240-247
TGGGT 3424280 4.656774 42.35429 100-109
ATTAC 2373370 4.6497226 97.17378 240-247
CTCCA 3314220 4.6176343 39.70644 80-89
GACAC 3575765 4.5464926 48.157112 230-239
ACACG 3455100 4.3930697 51.93559 230-239
GAGAC 3512580 4.338808 86.622826 8
AAGGG 3594075 4.3128877 44.533215 90-99
CCCTG 3645065 4.292915 91.93262 10-14
TACTG 2580570 4.273523 71.54602 240-247
TTCAC 2503425 4.2674475 68.75563 40-44
TGAGA 2822060 4.2648706 95.173615 15-19
TCTGG 3036355 4.2504187 139.31334 35-39
ATTCA 2117455 4.1483536 103.77502 40-44
CCAGG 3834880 4.1216207 53.593525 80-89
GAAGG 3390755 4.0689034 36.189316 90-99
GGGTC 3593545 3.994327 123.09134 8
ACTGG 2987490 3.9284225 47.041626 60-69
TGGAG 3068935 3.9204519 38.780594 90-99
CTGGG 3519975 3.9125519 134.06097 5
CACCA 2966730 3.8828332 54.487637 160-169
ACCAT 2388895 3.8252797 63.587784 160-169
CAGCC 3442700 3.808717 51.310425 30-34
TCCAG 2794535 3.7825484 40.07196 80-89
GACTC 2786100 3.7711313 55.79989 20-24
AGCCT 2763490 3.7405272 49.88308 30-34
TACTA 1897395 3.7172291 28.244766 130-139
TCAGT 2227570 3.6889415 62.46765 7
GAGTG 2880170 3.6793115 42.04818 100-109
CAAGA 2514460 3.6743472 43.47683 180-189
AGACT 2342945 3.644727 73.34904 15-19
ACTAC 2255860 3.6122541 27.932545 130-139
CACCT 2587570 3.6052077 42.6056 20-24
GATTC 2167160 3.5888996 58.861313 40-44
CCTGT 2479310 3.5725086 63.338783 25-29
AGACA 2423695 3.5417135 35.18657 170-179
ACTGT 2112800 3.4988778 57.02163 240-247
TGAAG 2279120 3.4443464 37.385056 150-159
ACTCT 2015315 3.4353938 71.395966 20-24
GCTGG 3076490 3.4196053 33.88819 90-99
GGAGT 2638310 3.3703446 37.40994 90-99
GTCCC 2805930 3.3046372 76.35644 10-14
GGTCC 2873780 3.2880414 134.88036 9
AGGGA 2739160 3.2869897 42.025623 80-89
GGATT 2031615 3.2685006 56.75504 40-44
CCTCA 2333540 3.251273 53.185783 5
TATCT 1551320 3.2354183 43.22606 200-209
GTATT 1585115 3.2116377 58.636368 240-247
GGCTG 2878725 3.1997843 35.654263 90-99
AAAAA 1591970 3.1629293 15.876724 190-199
TCCTG 2188965 3.1541417 61.392773 25-29
GGACA 2535250 3.131591 23.346504 220-229
GTCTC 2151075 3.0995452 35.383633 30-34
CTCCT 2087730 3.096563 94.07798 20-24
CTGCA 2213400 2.9959517 47.815216 25-29
GGAAG 2491395 2.9896724 31.429745 80-89
CCATC 2143245 2.9861388 38.981987 45-49
AAGAA 1756730 2.950315 33.783367 180-189
GGGAA 2402455 2.8829443 35.08259 80-89
ATCTC 1651570 2.8153384 45.23707 170-179
CAGGG 2674465 2.7924793 38.2696 80-89
CCCTC 2292630 2.7793565 35.265644 20-24
GTGTA 1724990 2.775196 25.873795 230-239
CATCT 1624510 2.7692106 31.336395 170-179
CTGTC 1863685 2.685437 50.114594 30-34
GAGTC 2028690 2.6676412 29.046585 160-169
AGTAG 1748445 2.6423578 27.981686 50-59
ATGAA 1471215 2.6303103 26.70941 210-219
CCGCC 2686850 2.586396 34.406372 70-79
GTGAA 1701335 2.5711622 35.823605 150-159
CGCCA 2320265 2.566948 40.04844 70-79
TGTGC 1829795 2.5614247 56.079727 25-29
GACAA 1744835 2.5497043 25.954576 180-189
CCAAG 1980375 2.5179954 38.046597 180-189
CACGG 2339100 2.5139987 46.820538 230-239
TCTGT 1403940 2.4750636 25.137342 210-219
GAACA 1691815 2.4722269 32.042213 210-219
CACTG 1819540 2.462842 22.664345 30-34
ACGGC 2280215 2.4507108 49.537453 230-239
AGCTG 1853620 2.4374316 27.455538 60-69
GTGGA 1895000 2.4207933 27.97058 100-109
TATAT 1007715 2.4154315 25.117645 240-247
AGAAC 1640790 2.3976645 29.962202 190-199
CTACT 1399465 2.3855891 22.283577 60-69
GGGGG 2770315 2.3753507 102.398865 7
GGGCT 2132165 2.3699617 42.49475 90-99
ATCTG 1424245 2.3586044 32.344006 200-209
GTATC 1417125 2.3468134 21.161242 200-209
ACCTT 1372440 2.3395212 52.663445 40-44
TGAAC 1496850 2.3285265 34.6733 210-219
CTCTC 1568070 2.325793 96.504486 20-24
CAGTG 1762605 2.3177507 49.754326 8
TCTAT 1102560 2.2994885 18.34366 110-119
TGCAA 1465515 2.2797813 32.859028 200-209
ACAAC 1507355 2.2673273 20.556742 180-189
AGGCT 1723135 2.265849 20.923723 80-89
CTACA 1401355 2.2439559 13.9882965 140-149
CTCAC 1608870 2.2416053 60.54871 20-24
TCCAA 1392570 2.2298887 39.4235 180-189
TGGTG 1624110 2.2086728 35.434994 35-39
AGGGC 2110365 2.2034874 30.173704 150-159
GCCTC 1861440 2.1922798 45.943764 4
GAGCT 1655385 2.1767607 23.958815 60-69
CTATG 1314360 2.1766305 19.405077 50-59
TGGGG 2009595 2.1700304 127.61022 6
AAATG 1205490 2.155234 33.45444 200-209
AGAGT 1424995 2.1535401 28.025866 150-159
CAAAT 1169980 2.1531413 33.87389 200-209
AATGA 1203545 2.1517568 25.72608 210-219
GTGGG 1982565 2.1408424 29.387873 100-109
TCTCT 1173335 2.1292324 41.43247 35-39
TCCGC 1801830 2.122075 41.859283 70-79
GGCCG 2326605 2.1137216 21.52463 230-239
GCTCC 1793635 2.1124234 32.886444 80-89
GCAGC 1955875 2.1021192 34.978188 30-34
CTATT 1002820 2.091472 16.659616 110-119
CAGGC 1945615 2.091092 31.267593 70-79
TGTCT 1184990 2.0890677 49.17372 30-34
ATCAG 1338440 2.082101 25.573826 45-49
CCTCT 1398290 2.073972 48.27071 35-39
CCTTC 1396510 2.0713317 50.918297 45-49
CTTCA 1204815 2.05378 47.722576 45-49
TGCAG 1558610 2.049506 44.77731 30-34
TGTGA 1272505 2.0472298 19.845303 210-219
GTAGT 1270575 2.044125 20.862833 120-129
CAGTA 1304520 2.0293345 21.0003 50-59
ACAGC 1595090 2.0281157 24.263075 210-219
AGAGA 1421290 2.017692 29.146883 170-179
GGCTC 1759985 2.0136905 18.463165 40-44
GCTGT 1434710 2.0083678 19.545786 230-239
ATATC 1015855 1.9901843 15.255997 170-179
GTGGT 1454505 1.9780221 24.261955 120-129
CATAT 1008710 1.9761864 14.35275 170-179
TCCAT 1158825 1.9753836 33.31116 45-49
GCCTG 1723145 1.9715397 26.633392 210-219
CAGAG 1593805 1.9686996 32.35255 170-179
ACCTG 1450205 1.9629279 38.383694 25-29
ACCCT 1399310 1.9496297 43.561314 10-14
GCCAG 1804475 1.9393988 35.49995 70-79
CAGAC 1524985 1.938979 22.51677 140-149
GCAGA 1557935 1.9243919 21.231104 140-149
TATCA 981810 1.923486 15.324956 170-179
AAGAG 1353100 1.9208881 21.380495 150-159
ACTAT 973570 1.9073428 15.020491 50-59
GGTGG 1764720 1.9056059 20.51173 40-44
CCAGA 1495720 1.901769 33.292526 170-179
TGACC 1405010 1.9017541 15.195203 210-219
ATGGA 1254130 1.8953185 12.161754 120-129
AACAG 1283755 1.875934 30.871275 210-219
TGCAC 1383970 1.8732754 24.6232 25-29
GCCGA 1722715 1.8515254 18.631418 220-229
TACAA 1006000 1.8513651 17.344816 140-149
CCTGC 1564330 1.8423635 41.549637 20-24
ATTGG 1144860 1.8418723 21.103767 100-109
GGGGC 2073020 1.8296386 30.93137 90-99
TGGGA 1430430 1.8273221 14.336344 120-129
TTCAG 1102175 1.8252441 43.66448 45-49
GTGCA 1363095 1.7924119 51.055225 25-29
GTCAC 1320530 1.7874061 34.01179 160-169
CTGTA 1079155 1.7871219 21.91019 190-199
GGATC 1344620 1.7681181 20.85648 70-79
GGTCT 1254595 1.7562354 27.648628 15-19
TAGTA 922595 1.7559388 15.314218 120-129
AACTA 941815 1.733244 27.341675 130-139
TATGC 1046080 1.7323486 13.516843 50-59
AGGGG 1705900 1.7303874 34.883583 90-99
TTATT 677835 1.7296109 28.114115 240-247
GATGG 1347855 1.7218354 18.845825 100-109
GAGGA 1400040 1.6800468 23.708622 220-229
CTGAA 1078890 1.6783406 22.130964 200-209
ATACT 855405 1.6758431 24.388445 130-139
CTGGT 1189515 1.6651336 33.283638 35-39
AGTCA 1065990 1.658273 28.76735 160-169
CCTGG 1448605 1.6574243 48.923195 4
TACAT 845400 1.6562421 12.139324 190-199
CAGTT 996980 1.6510371 23.76319 190-199
ACCAG 1294630 1.6460884 14.087836 190-199
AGGAC 1325470 1.6372466 17.385235 230-239
TAGTG 1016260 1.634978 23.489439 120-129
GGGCC 1797995 1.633479 19.726906 2
ATCCG 1202730 1.6279576 24.996494 70-79
CTCAG 1199735 1.6239038 51.537228 6
ACAAT 881370 1.6220057 21.405453 180-189
AGTGA 1060645 1.6029121 56.55676 9
CTCCC 1320875 1.6012973 11.890678 190-199
GGATG 1252300 1.5997673 20.440863 100-109
GTCCG 1392945 1.5937408 35.296883 70-79
CGTCC 1350670 1.5907289 19.420166 180-189
TTCTG 895380 1.5785024 30.561214 30-34
TTCTC 867905 1.5749736 21.940325 190-199
CCGTG 1376000 1.5743531 15.663696 150-159
AACAC 1045505 1.5726236 19.492517 190-199
TTCCA 921250 1.570403 19.051771 180-189
TGTCC 1089645 1.5701005 62.032543 15-19
TCGGA 1183295 1.5559826 102.54025 7
AGTTC 939245 1.5554255 20.58113 190-199
TGAGC 1176160 1.5466003 11.99305 60-69
CATGA 991340 1.5421462 20.35987 60-69
CGATT 923745 1.5297569 32.79879 160-169
GTGAC 1162830 1.529072 15.44133 210-219
GGGGT 1413945 1.5268267 126.020744 9
TCTGC 1051130 1.5146031 30.126858 200-209
CATCA 942415 1.5090663 31.075277 45-49
GTTCT 855530 1.508249 21.221985 190-199
AGCAC 1184000 1.5054253 17.927626 130-139
GCAAA 1025565 1.4986445 29.704937 200-209
ATGCA 962130 1.4967065 14.924026 60-69
GCACT 1105610 1.4965004 23.497911 25-29
GCCGT 1301145 1.4887077 25.292591 230-239
CAACC 1137105 1.4882344 16.44543 140-149
CAAGG 1203615 1.4867291 14.304409 25-29
TCAGC 1091660 1.4776186 8.998856 45-49
ATTAT 616105 1.4767662 13.03131 240-247
ATATT 613450 1.4704022 26.681995 240-247
GCTGA 1108065 1.4570582 19.390017 200-209
CTCAA 906105 1.450924 20.404219 150-159
TCTCA 850995 1.4506432 23.931374 100-109
GTCCA 1071650 1.4505339 27.622082 180-189
CACAG 1137685 1.4465369 11.281232 140-149
GAGAG 1199240 1.4390872 25.143059 220-229
AGAGC 1162605 1.4360726 22.168781 220-229
GGACT 1090475 1.4339284 16.102821 90-99
AGACC 1126100 1.431807 92.61944 9
TCCGT 990045 1.4265841 13.280166 150-159
GAACT 916785 1.4261671 13.702227 190-199
GGAGC 1364355 1.424559 9.868796 60-69
TCTGA 853910 1.4141076 15.809947 220-229
GCTAT 849275 1.4064317 19.202812 50-59
CCATA 877360 1.4048953 14.598479 160-169
CTTTA 667780 1.3927156 38.06612 45-49
ACTCC 997340 1.3895732 16.33623 140-149
CTTCG 959545 1.3826356 113.74245 5
CGGCC 1470460 1.375123 27.81637 230-239
GGAGA 1142505 1.3710052 92.831955 9
CACGT 1011390 1.3689688 18.690811 180-189
AACCC 1044110 1.3665233 19.405575 140-149
TTTAT 534700 1.3643779 13.4428 240-247
CAACT 851415 1.3633503 15.199597 130-139
TGGTA 844405 1.3584945 21.277779 120-129
TTAGT 669840 1.3571782 20.780586 110-119
CCATG 1001460 1.3555282 12.77837 160-169
AGTCG 1030105 1.3545443 16.572142 150-159
TGGAA 894045 1.3511358 18.063417 120-129
TCAAG 864925 1.3454927 23.551096 150-159
CAATT 685480 1.3429393 20.670963 180-189
GCACA 1053820 1.3399044 12.481603 130-139
ATCTA 682350 1.3368073 18.203663 110-119
TCACT 784100 1.336611 14.474303 190-199
GTTAC 806725 1.3359675 14.946568 50-59
GATTG 828465 1.33285 24.630829 100-109
AGTTA 700270 1.3327963 17.925299 50-59
TGTGT 777750 1.3320318 17.80443 240-247
GTGGC 1197260 1.3307884 16.835882 40-44
TTCGG 950045 1.3299135 109.79227 6
CGGCT 1161130 1.3285092 24.002712 230-239
ATACA 716130 1.3179107 17.324648 35-39
CGACA 1032630 1.3129619 12.482362 70-79
AACCA 865445 1.3017817 18.671692 190-199
GTCGA 988630 1.3000064 12.244296 160-169
AATTC 663250 1.2993879 20.545637 180-189
TTGGG 948170 1.2894429 13.79618 100-109
GACCC 1159395 1.2826582 48.986565 10-14
ACGTC 940940 1.2736112 20.457846 180-189
AGATC 815780 1.2690419 8.103846 210-219
TTACA 642540 1.2588146 8.741073 120-129
GATCC 927775 1.2557915 24.70327 70-79
GGCCT 1091660 1.2490251 44.44725 3
ACAGT 799135 1.2431487 12.262176 120-129
GGCAG 1181565 1.2337031 10.507836 70-79
ACATA 664035 1.222039 18.342873 130-139
TGGAC 925520 1.2170194 11.565484 80-89
TCGAG 924615 1.2158294 12.209866 160-169
CCTTT 667040 1.210467 40.735268 45-49
GTAGA 798245 1.206357 16.305882 170-179
GGCTT 861040 1.2053204 14.25011 25-29
CCGAT 883785 1.196249 24.339203 160-169
CCAGT 880450 1.1917348 17.277832 190-199
CGTGT 850520 1.1905938 17.904552 230-239
GCCCC 1235510 1.1893175 14.260387 80-89
TACGC 876810 1.186808 20.947206 140-149
GAGCA 953675 1.1779981 7.3161597 130-139
CCAAC 898720 1.176238 12.688235 130-139
CCTAC 842615 1.173998 12.674062 190-199
GAACC 917300 1.1663232 10.987301 190-199
ACAGA 796210 1.1634911 14.564191 140-149
CCGTC 975560 1.1489495 10.062165 140-149
CCCCA 998415 1.1369827 18.149893 80-89
CGCTG 992760 1.1358683 9.179057 190-199
ATCAT 578390 1.1331369 8.388548 110-119
ACCAA 748565 1.1259736 16.006609 130-139
CTTCT 619930 1.1249771 18.926638 30-34
AAGCT 722720 1.1242762 13.309276 200-209
ACACA 742560 1.116941 7.1290145 130-139
GGGAC 1068130 1.1152626 12.840287 90-99
CATTA 568145 1.1130656 11.62597 110-119
ACCGC 1005775 1.1127058 15.153666 220-229
TAGAC 714530 1.1115355 16.6713 170-179
GATCT 670635 1.1105971 7.4393253 220-229
ACATG 713890 1.11054 9.976992 190-199
GGGTG 1026830 1.1088067 11.39912 60-69
TTATA 462425 1.1084045 11.744454 110-119
TGAGT 688940 1.1083796 15.906863 90-99
ACACC 844715 1.1055566 12.9697485 40-44
TGGCT 789285 1.1048746 31.608614 40-44
AGCAG 890830 1.1003709 10.911575 50-59
CTACG 812100 1.0992196 12.597411 140-149
GGGAG 1083035 1.0985816 8.799386 5
GCCAA 863265 1.097619 15.505299 180-189
TAGTT 536420 1.0868528 17.142794 50-59
GAAGT 716710 1.0831363 9.123521 140-149
CGCAG 1006955 1.0822468 13.929779 140-149
GAGCC 1002440 1.0773941 17.247267 220-229
AGCCC 970085 1.0732214 15.460676 80-89
AGCTA 689160 1.0720696 17.417099 50-59
ATTCC 622615 1.0613368 18.709682 180-189
CTATA 541100 1.0600811 10.703345 50-59
CGAGT 803295 1.0562986 17.62326 160-169
CGTAT 636200 1.0535715 7.4631004 110-119
GTCTG 750495 1.0505748 20.480495 3
GTGCG 942240 1.0473264 12.716692 240-247
AACTG 670300 1.0427307 13.776453 60-69
ACTCA 648365 1.0382112 12.649028 190-199
CGGAG 992825 1.0366347 81.22875 8
GTATA 544570 1.0364587 10.012432 240-247
GACTG 787735 1.035838 15.329081 90-99
ATATA 459985 1.0356982 10.977002 130-139
CAGCT 755335 1.0223851 8.102474 50-59
TTTCA 489705 1.0213242 7.456148 100-109
CCCAG 916465 1.0139008 15.832875 80-89
ATTAG 531060 1.0107458 20.769539 110-119
ATCAA 546680 1.0060679 10.923029 110-119
TGCGA 764565 1.0053705 9.794396 240-247
TAGCA 641810 0.998411 8.400503 50-59
GCAAG 805490 0.99495703 15.712972 25-29
ATGAG 657395 0.99349576 16.914095 60-69
CTCCG 842605 0.992364 9.438195 150-159
ATGAC 636365 0.9899407 7.9955735 160-169
TATTT 387415 0.9885551 11.5746155 240-247
CCTCC 813710 0.986461 10.868055 140-149
GCTTC 680815 0.9810056 24.736364 2
AACTC 610285 0.9772346 14.873207 190-199
ATGGG 763755 0.975669 15.766371 100-109
CCCCT 802240 0.9725559 9.413033 140-149
GGAAA 683125 0.9697782 5.434738 80-89
GACAG 781985 0.96592337 12.036897 70-79
TACAG 618965 0.962873 6.2582 120-129
AGGCC 889805 0.9563372 10.255408 70-79
TGAGG 745610 0.95248944 7.888825 220-229
CGAGG 908395 0.94847906 14.644402 220-229
AGCCG 882125 0.94808304 18.058859 220-229
CGTGA 719100 0.94558585 18.511341 150-159
TACCA 589920 0.9446246 8.337994 130-139
AAGGC 763960 0.9436585 21.256933 25-29
TATTG 465460 0.9430792 10.096119 240-247
AGCTC 695470 0.9413548 10.779719 210-219
GAAGC 760050 0.9388287 10.792751 200-209
TTTAG 462300 0.9366767 29.636824 45-49
GCTCT 649760 0.9362576 13.6298485 210-219
CGCCG 1000785 0.93589926 11.733158 220-229
GTTTC 530760 0.9356986 5.027618 100-109
GAAGA 658985 0.93550843 5.2747617 15-19
GTCTA 564670 0.93511504 7.469948 30-34
CACAT 583410 0.93420035 10.936954 130-139
GATGA 608770 0.9200107 7.955336 60-69
TATAC 467685 0.9162522 8.638189 130-139
ATAGT 479550 0.9127087 14.658994 120-129
ACAAG 624375 0.9123908 12.113443 80-89
TACAC 568670 0.9105975 16.84758 35-39
GATAC 585175 0.9103086 20.145395 35-39
CTGAC 668695 0.90511346 9.04668 220-229
CAGCA 709865 0.9025749 7.6872725 45-49
GCAGT 686355 0.9025276 6.7491784 50-59
AGTCT 541615 0.8969351 11.572475 8
TTGAG 556855 0.8958788 15.4701 90-99
ATTAA 396350 0.8924182 7.4878907 110-119
CCGAG 821075 0.88246834 16.392145 220-229
ACGCA 693680 0.8819961 16.871912 140-149
AGGTC 668150 0.87858886 15.953793 15-19
CGTCT 602880 0.8687069 6.002851 35-39
TTTCT 391235 0.8686288 8.438813 4
GACCG 802600 0.86261183 9.874731 220-229
CTTGA 514490 0.8520151 16.362486 90-99
GCCAT 627755 0.84969896 6.568469 60-69
ATGGT 526500 0.8470431 8.0409975 120-129
GCACC 764595 0.8458842 10.733921 130-139
TTGGA 522080 0.839932 8.357213 60-69
TCTTC 462195 0.83873796 34.370514 4
AATCA 451365 0.8306575 10.601823 110-119
AATAC 449600 0.8274093 11.398861 130-139
CGGAC 766385 0.8236889 11.931247 220-229
AAGGT 544065 0.8222245 18.676619 15-19
CCCCC 829130 0.82155657 14.273254 80-89
CATAC 506210 0.8105818 11.375816 130-139
TGGTT 472980 0.8100603 9.104778 35-39
ATGAT 424615 0.80815303 7.0288024 120-129
TAACA 439010 0.8079203 7.0493865 120-129
TATGG 497930 0.80107915 9.934214 35-39
AGAAG 563820 0.8004103 10.3817835 140-149
ACAAA 462820 0.80008984 11.409261 130-139
ACTTC 467235 0.7964692 33.1199 4
GAGAT 526810 0.7961477 7.545443 210-219
GGTAT 493875 0.7945554 9.352023 110-119
CCGTA 585680 0.7927483 6.1144953 230-239
CAGAA 541780 0.79169595 12.4760895 140-149
ACAGG 634295 0.78349376 11.652753 70-79
GAAAT 434345 0.7765433 6.072874 110-119
GGTTC 554230 0.7758347 8.890994 160-169
TCATA 394620 0.7731089 6.596219 120-129
TCCTT 424585 0.77048767 12.302394 3
GTAGC 583375 0.7671133 8.7467165 50-59
TCCGG 670410 0.7670509 12.991174 70-79
AAACT 416375 0.76626456 10.52262 130-139
TTATG 377820 0.7655097 9.850858 50-59
CAACG 600855 0.7639715 15.16456 180-189
ATAAA 358970 0.75924194 8.548864 110-119
AAATA 358550 0.7583536 12.027404 130-139
TACTT 358935 0.7485914 12.498433 3
TCAAT 379690 0.74385923 7.2373734 110-119
TGACT 449020 0.74359435 6.4000854 40-44
TGATG 461605 0.7426388 11.562486 120-129
GTTAT 365720 0.7409937 8.079855 50-59
TATAG 388700 0.73979753 7.0433803 120-129
CATGG 561140 0.7378752 7.574825 200-209
ATTTA 307005 0.7358722 7.0078273 110-119
AACGC 573075 0.72865003 14.429543 180-189
ATTTC 348170 0.72613996 6.108752 240-247
CAGTC 535165 0.72437364 5.4489455 210-219
TATGA 380500 0.7241908 5.1704025 50-59
TTCAT 346610 0.7228865 5.48677 40-44
GTTCA 436270 0.72247976 10.4378195 160-169
ACGCC 652460 0.7218275 13.166628 180-189
AAGTT 376920 0.71737707 11.781741 140-149
GCCTA 528975 0.7159951 12.371514 190-199
ACGCT 527695 0.71426255 11.074774 190-199
GCGGA 675410 0.7052133 10.375686 220-229
GGATA 465480 0.703462 15.321611 35-39
TCAAC 438625 0.7023596 5.8420377 110-119
TCATC 410995 0.7006 5.7420278 110-119
GCCGC 748250 0.69973737 11.884787 220-229
GGTGC 624740 0.6944162 8.348514 60-69
AGTAC 445060 0.69234324 5.1913133 130-139
TTTAC 331740 0.6918738 11.153742 45-49
ACGAC 540850 0.6876768 9.611312 220-229
ATGCC 502850 0.68063354 7.144847 50-59
GACCA 534475 0.6795711 5.6100497 170-179
ATCCA 424180 0.6792292 5.636505 180-189
AGATG 449365 0.679108 6.844953 120-129
ACCTA 424100 0.67910105 7.4972525 130-139
CTGCG 591390 0.67664003 15.144285 25-29
TATGT 332605 0.6738986 8.0345545 140-149
TGCCA 496075 0.67146325 6.1684294 60-69
CGGCA 624295 0.6709747 11.986237 70-79
GGTTA 415170 0.6679332 6.6935344 35-39
AATTA 296440 0.6674617 5.588927 50-59
AATGG 441370 0.6670255 6.3812428 120-129
ACACT 414710 0.6640651 5.605772 2
CCAGC 599720 0.66348034 5.739 80-89
AAGAT 370705 0.6627646 6.5475936 120-129
CACCG 597820 0.6613784 8.668313 45-49
GACGA 534560 0.66029906 11.337294 220-229
AGTAT 346415 0.65931803 6.751245 110-119
GGTAG 514750 0.65757424 8.549069 120-129
CCGGC 701570 0.6560839 10.375126 70-79
ATCTT 309805 0.6461264 11.205581 3
GGGAT 495850 0.63343024 10.828355 100-109
CACAA 418375 0.62930965 7.9934583 130-139
GGTGA 491705 0.6281352 5.755872 120-129
GATCA 398990 0.6206759 7.7622523 110-119
CCCGT 518870 0.61109054 9.211543 140-149
GCTTG 434405 0.6080985 12.076228 90-99
TAATA 267260 0.60176027 5.29439 130-139
CTATC 350715 0.5978441 5.6468534 110-119
AGTAA 330030 0.5900438 6.000551 50-59
TGGTC 419590 0.5873599 6.902314 8
TATCC 341870 0.58276653 5.8391395 170-179
TTACC 341300 0.5817949 7.863528 45-49
GGGCA 548760 0.57297474 9.662668 150-159
GGGTT 419485 0.5704694 5.5393357 100-109
TGTGG 417120 0.5672532 5.2627716 140-149
ACCCC 495975 0.5648102 9.030278 140-149
GTCCT 390310 0.5624088 6.396723 2
TCAGG 426685 0.56107265 5.2258286 150-159
GGCCC 598615 0.55980396 7.838979 70-79
CATAA 303735 0.5589706 7.450919 110-119
TGGCC 485390 0.55535996 11.261929 4
AACAT 300295 0.55263984 7.150627 110-119
AGTTG 342805 0.55151105 6.159421 60-69
ACCCG 496705 0.5495131 7.920737 140-149
GGGGA 541330 0.5491005 7.4503546 4
GCGAC 507765 0.5457314 6.318536 70-79
TCCAC 389265 0.5423549 5.8634424 180-189
CTTTG 305800 0.5391074 5.1011796 45-49
CAAAC 355335 0.5344864 8.346258 130-139
GCGTC 466025 0.5332035 5.447215 30-34
CACTT 311445 0.53090274 6.4728413 3
GAGTT 329965 0.5308539 5.9182024 60-69
GTACT 318820 0.5279782 7.1635246 2
ACATT 267800 0.524653 6.204777 110-119
CACGC 466470 0.51606363 8.905031 190-199
TGACG 390695 0.51374733 8.220717 220-229
GTTTA 248450 0.50339025 5.280282 240-247
AGCGT 381750 0.501985 5.937918 30-34
AACCT 312685 0.50069493 9.592099 2
ATTCT 239855 0.5002393 8.735768 2
AGGCA 404235 0.499319 5.874648 80-89
GAGTA 327610 0.4951044 5.1675377 110-119
AAGTG 326085 0.49279973 5.9167857 120-129
CAATC 306140 0.4902146 5.0587745 110-119
GCCTT 338625 0.4879344 18.337866 3
TGATT 239645 0.48555022 5.1183424 50-59
TTAGC 291125 0.48211417 6.8450313 45-49
TGCGC 420675 0.48131618 9.943498 25-29
TAGCT 286400 0.47428933 9.405589 50-59
GGTTT 276200 0.4730404 5.4649925 100-109
CGGTT 334740 0.46858326 8.88719 160-169
AAATC 250695 0.46135983 6.689164 110-119
GGTCA 346355 0.4554421 5.0359607 160-169
CCCTA 325225 0.45312932 6.9217515 110-119
GCTAC 330000 0.4466721 5.7925677 50-59
CCGCA 399525 0.44200125 5.385978 220-229
TTCTT 197335 0.43812764 13.502649 3
TACCT 253425 0.4319993 5.1045985 2
GTAAC 276170 0.429615 5.073162 120-129
CGCGG 466025 0.42338386 5.562545 220-229
ATTGT 206710 0.41881987 8.341238 240-247
GCGCT 364680 0.41724935 8.881524 25-29
GCATG 314910 0.41409323 7.750569 60-69
GACTT 246775 0.40866888 8.701341 1
ATCCT 238165 0.40598643 9.137757 2
GTGTC 286185 0.4006139 5.5201874 30-34
CCGGT 347065 0.39709514 7.188002 160-169
ATGTG 244165 0.3928172 5.983144 140-149
TTAAT 163210 0.39120445 5.6340346 110-119
AGCTT 236200 0.39115626 7.6911263 1
CCGGG 425770 0.3868122 5.177134 80-89
CTCTT 212050 0.38480377 7.831852 1
CCTAA 237985 0.3810796 6.5592384 110-119
CATGC 277830 0.37605736 6.11761 60-69
TAAAT 166360 0.37457472 5.096942 130-139
CAGCG 346590 0.37250516 5.6403503 30-34
GGTAA 243960 0.36868736 6.0442877 120-129
CGCCT 308075 0.3628302 5.1643286 2
AACTT 179615 0.3518878 9.713223 3
CGTCA 254495 0.34447217 5.134084 45-49
TTCCT 189175 0.3432929 7.948378 2
CCGCG 365365 0.34167665 5.561131 220-229
CCCTT 225420 0.33434752 5.8060555 3
AATCT 163970 0.3212373 7.1778665 2
TAACT 162695 0.3187394 5.2957025 2
TGCTG 224820 0.31471258 10.791672 1
TTGTG 180760 0.30958286 5.695377 240-247
GTCTT 171720 0.30273226 8.932141 1
TCCTA 173490 0.2957386 6.8012195 9
TGCCT 200370 0.28871885 10.327282 2
TGTAA 138655 0.2638966 6.529877 25-29
TGCTT 135105 0.23818217 8.633895 1
CGGGG 259615 0.22913508 7.2825675 3
AAGCC 165105 0.20992674 5.3241653 1
TTGCT 69940 0.123300105 5.6927977 4