FastQCFastQC Report
Sat 8 Jul 2017
HNCHNBCXY_s2_2_illumina12index_11_SL254621.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HNCHNBCXY_s2_2_illumina12index_11_SL254621.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 4513515
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 19854 0.4398788970458722 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 11903 0.2637190748230592 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 11253 0.2493178819611766 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 11117 0.24630470930084425 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10756 0.2383065083421679 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10559 0.2339418391209512 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 10529 0.233277168681172 No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG 10304 0.22829214038282802 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9409 0.208462805596082 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9232 0.2045412500013847 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 9193 0.20367717842967176 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9161 0.20296819662724064 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 9023 0.1999107126042563 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 8548 0.18938676397441906 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8414 0.18641790267673863 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8317 0.18426880158811923 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 8313 0.18418017886281535 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7990 0.177023893794526 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7948 0.17609335517883512 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7690 0.17037718939673402 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7668 0.16988976440756262 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7666 0.16984545304491067 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7655 0.16960174055032495 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7641 0.16929156101176135 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7525 0.16672150197794847 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7517 0.16654425652734067 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7507 0.16632269971408092 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7338 0.16257838956999146 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 7273 0.1611382702838032 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7241 0.16042928848137206 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 7139 0.15816940898612278 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 7067 0.15657419993065272 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6829 0.1513011477750711 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 6810 0.1508801898298776 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 6748 0.14950653758766724 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6625 0.14678138878457256 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 6519 0.1444328865640194 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 6341 0.14048917528799615 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 6200 0.13736522422103395 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5939 0.13158259139495493 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 5800 0.12850295169064466 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5791 0.1283035505587109 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 5704 0.12637600628335124 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5696 0.12619876083274345 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5691 0.12608798242611358 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5672 0.12566702448092007 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 5519 0.12227720523804618 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 5394 0.11950774507229953 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 5251 0.11633948264268534 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 4872 0.10794247942014151 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 4683 0.10375505564953257 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 4631 0.10260296022058196 No Hit
TAGTCTGGTCCTACGCTGGTGAACCCAGGGTGGTGGTGTATCTGGGGAGA 4580 0.10147302047295732 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 8424625 7.079335 61.107327 35-39
TGGAT 6501880 6.6591806 74.40352 35-39
TATTA 4312650 6.6335354 117.87169 240-247
TCACC 6785440 6.1911798 69.0267 160-169
TCCCT 6044190 5.9230857 71.76212 15-19
TCTCC 6004975 5.8846564 85.001144 20-24
CTGTG 6123980 5.5270085 83.732956 25-29
AGTGG 6402005 5.1627502 40.650524 100-109
TTACT 3683735 4.993025 95.17195 240-247
CTGAG 5752360 4.8337917 53.843075 15-19
CTCTG 4974930 4.678645 79.78612 35-39
CCTGA 5329970 4.6670604 55.7008 15-19
CTCCA 5088855 4.6431794 40.187176 80-89
TGTAT 3566075 4.6386228 49.91741 240-247
TGGGT 5271600 4.5658545 41.498917 100-109
ATTAC 3591975 4.533088 94.00623 240-247
AAAAA 3549885 4.407289 25.096895 200-209
GACAC 5364185 4.373286 46.565952 230-239
TCTGG 4735495 4.2738743 135.89485 35-39
CCCTG 5507655 4.249716 89.936554 10-14
TTCAC 3818375 4.246332 66.578705 40-44
ACACG 5207435 4.245492 50.38576 230-239
GAGAC 5365740 4.198141 82.11799 8
AAGGG 5524520 4.1480613 41.97242 90-99
TACTG 3877505 4.138195 68.8163 240-247
ATTCA 3245150 4.095393 101.87783 40-44
TGAGA 4280280 4.081685 91.430756 15-19
CCAGG 5920045 4.081567 52.9055 80-89
GGGTC 5505775 3.9125338 118.18231 8
CACCA 4581235 3.8919158 52.872147 160-169
GAAGG 5155420 3.870924 34.17409 90-99
CTGGG 5428245 3.857439 127.4973 5
GAGTG 4706520 3.7954655 40.897957 100-109
ACTGG 4510090 3.7898939 44.805668 60-69
TGGAG 4658655 3.7568657 36.518776 90-99
TCCAG 4290045 3.756475 40.02597 80-89
CAGCC 5228580 3.756319 50.904423 30-34
ACCAT 3623870 3.7522645 61.38461 160-169
GACTC 4243045 3.71532 55.75079 20-24
AGCCT 4199470 3.6771646 48.55915 30-34
TACTA 2906795 3.6683874 27.241356 130-139
TCAGT 3415760 3.6454062 57.813473 7
ACTAC 3507245 3.6315076 28.262545 130-139
AGACT 3596825 3.5740726 70.029945 15-19
CCTGT 3785260 3.5598269 63.725857 25-29
CAAGA 3828350 3.54194 41.87753 180-189
CACCT 3871030 3.53201 42.345104 20-24
GATTC 3293945 3.5154014 58.508778 40-44
AGACA 3762330 3.480859 33.635353 170-179
ACTGT 3224500 3.4412878 54.9709 240-247
ACTCT 3068290 3.4121788 71.999565 20-24
GCTGG 4748360 3.374297 33.193832 90-99
GGAGT 4141530 3.3398416 35.234993 90-99
TATCT 2441800 3.309676 42.937477 200-209
GGTCC 4447680 3.2934415 133.6825 9
TGAAG 3444030 3.2842352 35.81897 150-159
AGGGA 4371805 3.2825499 40.282146 80-89
GTCCC 4237350 3.2695467 76.669914 10-14
CCTCA 3573050 3.2601268 49.977024 5
GGATT 3111325 3.1865976 56.256294 40-44
CTCCT 3182460 3.1186945 92.37699 20-24
TCCTG 3311570 3.1143477 62.10619 25-29
GTATT 2392170 3.1116493 56.115826 240-247
GGCTG 4353995 3.0940516 35.01462 90-99
GTCTC 3265890 3.071388 35.248344 30-34
CCATC 3324475 3.0333216 38.969555 45-49
GTGTA 2926365 2.997163 24.7898 230-239
GGACA 3810825 2.981579 22.258148 230-239
GGAAG 3958850 2.9724848 29.718103 80-89
CTGCA 3341005 2.9254708 46.645462 25-29
ATCTC 2623000 2.9169815 45.766872 170-179
AAGAA 2760465 2.8982596 32.675957 180-189
GGGAA 3837630 2.8814669 33.24396 80-89
CCCTC 3491110 2.8069422 35.254677 20-24
CATCT 2482105 2.7602952 31.007486 170-179
CAGGG 4140205 2.7393467 36.925472 80-89
CCGCC 4202965 2.6607802 34.643826 70-79
CTGTC 2792745 2.6264215 49.573494 30-34
AGTAG 2702510 2.5771198 27.455427 50-59
ATGAA 2277850 2.5685894 25.928488 210-219
GAGTC 3054125 2.5664258 27.209553 160-169
TGTGC 2823615 2.5483663 54.745537 25-29
GTGAA 2659755 2.5363488 34.602394 150-159
CGCCA 3513510 2.5241776 39.577103 70-79
CCAAG 3089385 2.5186982 37.210876 180-189
GTATC 2327525 2.484008 20.769882 200-209
TCTGT 2145680 2.4594502 24.50946 210-219
GACAA 2651080 2.452745 24.93788 180-189
CACGG 3545620 2.4445229 45.32611 230-239
GAACA 2616800 2.4210296 31.00452 210-219
CACTG 2744630 2.403269 22.004848 30-34
GGGGG 4447155 2.3879673 95.64262 7
CTACT 2138970 2.3787022 22.000986 60-69
AGCTG 2830645 2.3786318 26.819324 60-69
CTCTC 2421850 2.3733246 98.09566 20-24
ATCTG 2219445 2.3686614 31.85331 200-209
ACGGC 3432395 2.3664603 48.214287 230-239
TGAAC 2371415 2.3564143 33.719543 210-219
TATAT 1521010 2.339553 24.785686 240-247
GTGGA 2870175 2.3145869 26.620588 100-109
AGAAC 2494915 2.3082633 28.566399 190-199
ACCTT 2071535 2.303709 50.042587 40-44
TGGTG 2652405 2.2973094 36.80489 35-39
GGGCT 3218525 2.28716 41.35153 90-99
TCTAT 1681520 2.2791731 18.459051 110-119
TCCAA 2176765 2.2538884 39.269165 180-189
AGAGT 2359980 2.2504826 25.83541 150-159
CAGTG 2658115 2.2336528 45.569828 8
GCCTC 2883185 2.2246706 44.8681 30-34
TGCAA 2222030 2.2079744 32.094467 200-209
TCCGC 2854435 2.2024872 41.838383 70-79
CTCAC 2409530 2.1985066 59.79154 20-24
ACAAC 2280255 2.1983142 19.424501 180-189
AGGCT 2613375 2.196057 20.634773 80-89
TGGGG 3190680 2.1759362 119.74928 6
CTACA 2084530 2.1583853 13.542224 130-139
GTGGG 3148950 2.1474779 28.58257 100-109
AAGAG 2418380 2.147224 20.875776 150-159
CAAAT 1821305 2.140075 32.92564 200-209
GTGGT 2465305 2.1352577 23.585474 120-129
AGGGC 3225505 2.1341398 28.70029 150-159
AAATG 1891700 2.1331522 32.341995 200-209
GCTCC 2757020 2.1273215 33.13869 80-89
TCTCT 1779895 2.125907 40.95835 35-39
CTATG 1982090 2.1153488 19.254938 50-59
GAGCT 2515855 2.1141095 23.718287 60-69
AATGA 1871170 2.1100018 24.984373 210-219
CCTCT 2153115 2.1099741 49.377872 35-39
GGCCG 3578450 2.0863857 21.00402 230-239
GCAGC 3019270 2.081632 34.650063 30-34
CTATT 1526940 2.0696518 17.305874 110-119
TGTCT 1802415 2.0659885 48.38635 30-34
GTAGT 1997305 2.045626 20.766905 120-129
CCTTC 2084670 2.0429006 50.40033 45-49
GGTGG 2993470 2.0414455 19.90716 40-44
CTTCA 1833445 2.0389342 46.039307 45-49
CAGGC 2952080 2.0353076 29.725183 70-79
TGCAG 2415540 2.0298135 43.872814 30-34
ATCAG 2038205 2.025312 25.534462 45-49
GGCTC 2731345 2.0225208 19.22308 40-44
TGTGA 1964590 2.0121195 19.04498 210-219
TATCA 1593000 2.0103729 14.619926 170-179
CAGTA 2021035 2.0082507 20.77511 50-59
AGAGA 2241870 1.9905049 27.718273 170-179
ACAGC 2420585 1.9734423 24.108387 210-219
CAGAG 2493165 1.9506458 31.2317 170-179
CAGAC 2390445 1.9488702 22.706083 140-149
GCTGT 2159070 1.9486018 18.55019 230-239
ATATC 1539145 1.9424076 14.473258 170-179
ACCCT 2126550 1.9403094 43.309742 10-14
GCCTG 2612055 1.9341882 25.823183 210-219
TCCAT 1723845 1.9170507 32.90543 45-49
CATAT 1510965 1.9068441 13.726666 170-179
ACCTG 2175645 1.9050511 37.366497 25-29
GCAGA 2420810 1.8940355 21.452015 140-149
GCCAG 2727800 1.8806779 34.565514 70-79
GTGCA 2209630 1.8567843 49.250088 25-29
CCAGA 2272875 1.853018 32.529305 170-179
TGACC 2094820 1.834279 14.772654 210-219
GGGGC 3264840 1.8267738 30.894257 90-99
TGCAC 2076270 1.8180361 25.183065 25-29
GCCGA 2633165 1.8154321 18.152395 220-229
TTCAG 1692385 1.8061664 42.93699 45-49
AACAG 1951415 1.8054241 29.737377 210-219
CCTGC 2339770 1.8053707 40.409668 20-24
ACTAT 1429230 1.8036942 14.5836935 50-59
ATTGG 1727220 1.7690068 20.51486 100-109
TACAA 1502640 1.7656363 16.128551 130-139
CTGTA 1649545 1.7604462 21.6633 190-199
ATGGA 1841730 1.7562782 11.38935 120-129
TGGGA 2174555 1.7536201 13.868008 120-129
TAGTA 1436990 1.7403549 15.115062 120-129
GTCAC 1974690 1.72909 32.705112 160-169
GGTCT 1910375 1.7241498 25.838839 15-19
CTGGT 1908070 1.7220695 32.893982 35-39
AGGGG 2695090 1.7112821 33.653214 90-99
AACTA 1449145 1.7027785 26.372149 130-139
GAGGA 2256090 1.6939749 22.34331 220-229
GGATC 2013920 1.6923263 19.852266 70-79
GGGCC 2887930 1.6837839 19.273277 150-159
TTATT 1016960 1.6800382 27.166687 240-247
ATCCG 1910930 1.6732597 24.618286 70-79
TATGC 1561895 1.6669035 12.896726 50-59
CTCAG 1894730 1.6590749 47.699924 6
CAGTT 1550275 1.6545023 23.613186 190-199
ACCAG 2006460 1.6358166 13.748949 190-199
ATACT 1292620 1.631292 23.475502 130-139
CTCCC 2018750 1.6231269 12.063931 190-199
TAGTG 1584445 1.6227777 23.249146 120-129
GATGG 1992785 1.6070359 16.91338 100-109
CTGAA 1615330 1.6051121 21.746967 200-209
TCGGA 1906120 1.6017404 98.97312 7
AGTCA 1611035 1.6008441 27.510515 160-169
TACAT 1267470 1.5995525 11.302281 190-199
CCTGG 2151715 1.5933132 46.892567 4
TGTCC 1692140 1.5913637 60.571766 15-19
TTCCA 1430470 1.5907947 19.344263 180-189
AGTGA 1664985 1.5877337 51.48492 9
AGGAC 2014200 1.5759048 16.769846 230-239
TTCTC 1318120 1.574363 21.745005 190-199
AGTTC 1475015 1.5741822 20.589312 190-199
GTCCG 2120890 1.5704877 34.807377 70-79
AACAC 1627300 1.5688231 19.124146 190-199
GCCGT 2116020 1.5668817 24.949896 230-239
CCGTG 2114975 1.5661076 15.752204 150-159
ACAAT 1332735 1.5659941 21.28821 180-189
CGTCC 2012345 1.552729 19.150227 180-189
CAACC 1815005 1.5419091 16.086363 140-149
AGAGC 1959630 1.5332093 21.232668 220-229
TTCTG 1331255 1.5259292 29.139103 30-34
TCTGC 1621530 1.5249588 30.054094 200-209
TGAGC 1813870 1.5242214 11.912229 60-69
CATCA 1463245 1.5150881 31.454018 45-49
GGGGT 2219610 1.513699 117.90919 9
CGATT 1415030 1.5101646 32.61004 160-169
GTTCT 1313235 1.5052739 21.26457 190-199
CATGA 1506970 1.4974374 20.513906 60-69
GCAAA 1594115 1.4748548 28.797386 200-209
AGATC 1479770 1.4704095 7.8360753 210-219
TCTCA 1322110 1.4702897 23.982952 100-109
AGCAC 1801175 1.4684528 17.684446 130-139
GCACT 1676080 1.4676194 23.900818 25-29
GTGAC 1742460 1.4642146 14.989219 210-219
GGATG 1813055 1.4620967 18.276161 100-109
GTCCA 1668295 1.4608026 26.917238 180-189
GAGAG 1942260 1.4583372 24.063196 220-229
ATATT 946390 1.455697 26.35395 240-247
ATGCA 1461980 1.4527321 14.530506 60-69
CAAGG 1844835 1.443394 13.459844 25-29
AACCC 1681480 1.428475 19.380692 140-149
CTCAA 1373990 1.422671 19.895706 150-159
TCAGC 1617140 1.4160097 8.970674 45-49
TCCGT 1504215 1.4146307 13.658179 150-159
ATTAT 915560 1.4082756 12.132257 240-247
AGACC 1718050 1.4006832 89.38736 9
GCTGA 1664155 1.3984137 18.29692 200-209
ACTCC 1527360 1.3935957 16.482706 140-149
GCTAT 1302680 1.3902612 18.755568 50-59
GAACT 1395815 1.3869855 13.125419 190-199
CCATA 1336175 1.383516 14.21217 160-169
GGAGC 2089220 1.3823222 9.698039 60-69
TTTAT 832295 1.3749679 13.636514 240-247
CACAG 1679110 1.3689363 10.489419 140-149
GGAGA 1819105 1.3658667 87.883675 9
CTTTA 1007120 1.3650751 35.465065 45-49
CGGCC 2242555 1.3624469 27.55559 230-239
GGACT 1617415 1.3591374 15.396788 90-99
TGTGT 1234060 1.3574775 17.247086 240-247
TGGTA 1324115 1.3561496 21.057625 120-129
CTTCG 1441830 1.355961 111.10563 5
CAACT 1301320 1.3474262 15.19197 130-139
TTAGT 1034180 1.3452243 20.864044 110-119
TCTGA 1250700 1.3347863 14.806897 220-229
CACGT 1522755 1.3333639 17.858965 180-189
TGGAA 1396630 1.3318297 17.15246 120-129
AGTCG 1566090 1.3160081 16.006262 150-159
ATCTA 1041160 1.3139483 18.146545 110-119
CAATT 1037645 1.3095125 20.52192 180-189
TTGGG 1504605 1.3031731 13.514013 100-109
CCATG 1488090 1.3030101 11.828596 160-169
GATTG 1271610 1.3023741 23.803232 100-109
TCACT 1170360 1.3015319 14.145717 190-199
AGTTA 1072500 1.2989168 17.537245 50-59
GTGGC 1825560 1.2972862 16.244362 40-44
TCAAG 1304585 1.2963326 22.760853 150-159
GTAGA 1355610 1.2927129 16.831709 170-179
TTCGG 1430765 1.2912927 106.32192 6
GCACA 1583065 1.2906334 12.187682 130-139
CGGCT 1736420 1.2857935 23.178717 230-239
AATTC 1014770 1.2806442 20.344248 180-189
CGTGT 1418270 1.2800157 17.257324 230-239
GACCC 1778145 1.2774557 48.5038 10-14
CCTTT 1066955 1.2743714 40.3617 45-49
ATCAT 1009605 1.2741257 8.147037 110-119
AACCA 1317940 1.27058 17.730625 190-199
GTTAC 1188305 1.2681966 14.261996 50-59
CATTA 1004540 1.2677337 11.748319 110-119
GTCGA 1503915 1.2637616 11.698022 160-169
ATACA 1070805 1.2582203 15.979467 35-39
GATCC 1426105 1.2487345 24.205057 70-79
ACGTC 1422000 1.2451402 19.732323 180-189
TACGC 1420630 1.2439404 21.10571 140-149
GCCCC 1962245 1.2422427 13.784527 80-89
CGACA 1516640 1.2364787 11.659276 70-79
GGCCT 1661900 1.2306124 41.681366 3
CCAAC 1439090 1.2225562 12.641279 130-139
TTACA 958710 1.2098961 8.542918 120-129
ACAGT 1214655 1.2069715 11.786696 120-129
CGTAT 1128835 1.2047282 7.7455726 110-119
CCCCA 1608320 1.2040039 17.673344 80-89
CCGAT 1367290 1.1972347 24.091623 160-169
GGCAG 1802520 1.1926286 10.106807 70-79
GATCT 1110260 1.1849043 6.966099 220-229
GAACC 1450060 1.1821976 10.341866 190-199
TCGAG 1402060 1.1781714 11.441256 160-169
CCAGT 1343115 1.1760664 17.174494 190-199
TGGAC 1391735 1.1694952 10.760184 80-89
ACATA 987420 1.1602411 17.462717 130-139
ACCAA 1200310 1.1571769 16.22485 130-139
CCTAC 1267885 1.1568453 11.841108 190-199
ACAGA 1248570 1.1551608 13.459508 140-149
GGGAG 1806715 1.147197 8.628227 5
CTACG 1310045 1.1471093 12.647009 140-149
CGCTG 1544205 1.143461 9.042555 190-199
GGCTT 1261330 1.1383743 13.37392 25-29
GAGCA 1445525 1.1309749 6.8583617 130-139
CCGTC 1465250 1.1305892 9.311612 140-149
GTCTG 1248455 1.1267544 26.35786 3
GGGTG 1632200 1.1131053 10.565854 60-69
TGGCT 1226630 1.1070571 31.686697 40-44
GGAAA 1245240 1.10562 5.7030325 80-89
GAGCC 1596200 1.100498 16.662031 220-229
AGCCC 1531745 1.1004368 15.852125 80-89
AAGCT 1104640 1.0976524 12.912441 200-209
CGCAG 1582180 1.0908319 14.219489 140-149
ACACA 1129755 1.0891575 6.8868103 130-139
TTATA 707155 1.0877157 11.771154 110-119
AGCAG 1388065 1.0860183 10.617345 50-59
TAGAC 1092160 1.0852513 16.17775 170-179
ACACC 1277115 1.0849531 11.8516865 40-44
TAGTT 832510 1.0828992 17.072313 50-59
CTTCT 905505 1.0815353 18.434195 30-34
ACCGC 1503905 1.0804361 14.488475 220-229
GGGAC 1630105 1.078551 12.112712 90-99
AGCTA 1083835 1.076979 16.701199 50-59
ACATG 1074850 1.068051 9.268893 190-199
AACTG 1071185 1.0644091 13.505148 60-69
ATTCC 955170 1.0622239 19.001608 180-189
GCCAA 1302120 1.0615858 14.924603 180-189
ATTAA 736205 1.0543507 7.711714 110-119
CCTCC 1309350 1.0527511 11.218931 140-149
GAAGT 1103025 1.0518473 8.630749 140-149
CCCAG 1457550 1.0471338 15.066956 80-89
GTATA 863050 1.0452497 9.861703 240-247
TGAGT 1016160 1.0407441 14.602202 90-99
CAGCT 1188025 1.0402657 8.038224 50-59
TTTCA 762875 1.0340195 7.6075897 100-109
CGAGT 1228760 1.032545 16.668434 160-169
CTATA 815310 1.0289246 10.279621 50-59
CGCCG 1693015 1.0285782 11.770495 220-229
TATTT 619160 1.0228648 11.72826 240-247
ATTAG 838625 1.0156683 20.599438 110-119
CGGAG 1532390 1.0138985 77.89984 8
GTGCG 1424725 1.0124433 12.284474 240-247
CTCCG 1311630 1.0120559 9.644956 150-159
ATATA 703545 1.007577 10.828048 130-139
GACTG 1187675 0.99802047 14.57499 90-99
CCCCT 1240550 0.9974341 9.838449 140-149
ACTCA 962390 0.99648774 12.270441 190-199
TAGCA 1001550 0.9952146 8.331028 50-59
GACAG 1254185 0.9812709 11.082988 70-79
ATCAA 826740 0.9714384 10.19999 110-119
TGCGA 1153760 0.96952134 9.504803 240-247
TGAGG 1199715 0.96748275 7.1371527 220-229
GCTTC 1023380 0.962432 25.30655 2
AACTC 924970 0.957742 14.419747 190-199
TACCA 922590 0.95527756 8.460885 130-139
ATGAG 1001720 0.9552426 15.928448 60-69
GCAAG 1215905 0.9513209 14.57736 25-29
GTTTC 829060 0.95029634 5.17336 100-109
TACAG 954390 0.9483529 6.3133636 120-129
ATGAC 949275 0.9432702 7.2451963 160-169
CGTGA 1119000 0.94031197 18.435436 150-159
GCTCT 997570 0.93815917 13.497771 210-219
AGCCG 1358230 0.93642974 17.640877 220-229
CACAT 904180 0.93621534 11.5498705 130-139
CGAGG 1405945 0.93023676 14.238407 220-229
GAAGC 1183925 0.9262998 10.477788 200-209
ATGGG 1145505 0.9237663 14.362338 100-109
AGCTC 1053515 0.922485 10.61702 210-219
AGTCT 858705 0.916437 14.253048 2
ATAGT 755585 0.9150976 14.280156 120-129
TATAC 716795 0.9045984 8.827474 130-139
CCGTA 1029015 0.90103215 6.5366373 230-239
GCAGT 1071020 0.8999937 6.4834223 50-59
TTTAG 691560 0.8995565 27.11654 45-49
AGGCC 1299570 0.89598674 9.4872 70-79
GTCTA 837390 0.8936889 6.859453 30-34
ACGCA 1096180 0.8936882 17.112633 140-149
CGTCT 947845 0.89139557 6.65494 35-39
AAGGC 1128970 0.88330317 19.561636 25-29
CCCCC 1329930 0.8773215 14.18836 80-89
CTGAC 1001120 0.8766067 8.459137 220-229
CCGAG 1271290 0.87648916 16.137402 220-229
CAGCA 1073660 0.8753282 7.4080343 45-49
TTTCT 600910 0.87478083 9.236482 4
ACAAG 939075 0.86882013 11.211193 80-89
TATTG 666335 0.8667448 9.419502 240-247
CATCC 949555 0.86639416 5.767527 110-119
TACAC 826610 0.855897 15.622375 35-39
TCTTC 714800 0.85375726 35.429382 4
TTGAG 833525 0.85369056 14.169448 90-99
GATGA 895000 0.85347414 6.8345876 60-69
GCACC 1179880 0.84764993 10.478115 130-139
GACCG 1225330 0.844802 9.447319 220-229
GCCAT 962090 0.842431 6.56836 60-69
AGGTC 995730 0.8367264 14.749153 15-19
CATAC 803685 0.83215976 11.576471 130-139
CTTGA 778670 0.8310211 15.178639 90-99
GATAC 835945 0.830657 18.76856 35-39
ATGGT 803360 0.8227958 7.764517 120-129
AATAC 699690 0.8221518 10.617447 130-139
TTGGA 799330 0.8186683 7.9509754 60-69
AGAAG 920690 0.81745946 9.506062 140-149
AATCA 691825 0.8129102 9.975467 110-119
AAATA 599430 0.79930085 11.472256 130-139
CGGAC 1159020 0.79908484 11.347973 220-229
ATGAT 659180 0.7983403 6.944329 120-129
ACAAA 728485 0.79698914 10.725328 130-139
AAACT 673100 0.7909079 9.991653 130-139
ACTTC 709320 0.7888194 31.599092 4
TATGG 763635 0.78210974 9.674397 35-39
TGGTT 710735 0.7818152 8.052499 35-39
TCATA 617950 0.7798555 6.380026 120-129
GGTTC 863150 0.7790092 8.906682 160-169
AAGGT 814710 0.7769094 17.145504 15-19
TACTT 566150 0.76737356 11.944083 3
TTATG 589850 0.7672558 9.32086 50-59
TCCGG 1034905 0.7663319 12.835318 70-79
TCCTT 641400 0.76608837 12.852573 3
GTAGC 910235 0.76488376 8.582749 50-59
ATAAA 572930 0.76396483 7.7991486 110-119
GGTAT 744345 0.7623529 9.15698 110-119
TAACA 644575 0.7573904 6.1404424 120-129
CAGAA 818135 0.756928 11.417821 140-149
GAGAT 789470 0.75284046 6.77348 210-219
ACAGG 960310 0.7513439 10.644276 70-79
GAAAT 662360 0.7469021 5.8362274 110-119
ATTTA 485400 0.7466217 6.862787 110-119
GTTAT 571190 0.7429835 7.643828 50-59
ATTTC 547390 0.74194586 6.3862805 240-247
ACGCT 845325 0.74018866 10.820768 190-199
TATAG 608860 0.73739725 6.601002 120-129
GTTCA 688675 0.7349756 10.406034 160-169
CAACG 901350 0.73484814 14.290602 180-189
TGGTC 812630 0.73341405 11.7378845 6
TTCAT 540210 0.73221385 5.145263 40-44
TGACT 685850 0.7319607 5.8689337 40-44
TCAAT 579675 0.7315523 6.9179277 110-119
TGATG 714000 0.7312739 11.4088745 120-129
CAGTC 829685 0.7264938 5.3162956 210-219
TCATC 645855 0.71824133 5.5621567 110-119
AAGTT 588630 0.7128964 11.217905 140-149
AACGC 873100 0.71181655 13.701502 180-189
ACGCC 987705 0.7095875 12.664391 180-189
GCCGC 1153615 0.70086986 11.772521 220-229
AGTAC 698595 0.69417584 5.0573273 130-139
CATGG 825190 0.6934191 6.9750233 200-209
GCGGA 1042035 0.6894575 9.944105 220-229
TTTAC 504990 0.68447584 10.476291 45-49
TCAAC 659435 0.6827989 5.5952163 110-119
GCCTA 779485 0.6825373 11.414304 190-199
CCAGC 948960 0.6817523 5.809678 80-89
GGTAG 841700 0.67876965 8.693428 120-129
CTGCG 904995 0.67013544 14.420852 25-29
ATGCC 762315 0.6675028 6.593666 50-59
ACGAC 818485 0.6672904 9.112023 220-229
CCGGC 1094975 0.6652435 10.337184 70-79
ACACT 641990 0.6647359 5.634905 2
AAGAT 588705 0.66384596 5.7164783 120-129
ATCTT 489620 0.66364294 12.856293 3
TGCCA 756765 0.66264313 6.244792 60-69
GGTGC 927620 0.6591887 7.8936424 60-69
TATGT 506030 0.6582257 7.345589 140-149
ATCCA 635700 0.658223 5.190954 180-189
AATGG 690025 0.65800947 5.758989 120-129
GGATA 688725 0.6567698 13.759411 35-39
GGTGA 813395 0.6559437 5.2596464 120-129
CGGCA 948860 0.6541903 11.62811 70-79
CACCG 907240 0.6517798 8.368302 45-49
ACCTA 628790 0.65106815 6.9300756 130-139
GCGTC 870925 0.6449072 5.531662 30-34
AGTAT 531685 0.64392966 6.2920403 110-119
AATTA 449155 0.6432541 5.213997 50-59
AGATG 673705 0.6424467 5.99127 120-129
GACGA 820900 0.6422699 10.6483135 220-229
GGGTT 733155 0.63500243 5.5788355 100-109
GGTTA 616485 0.63139963 5.671645 50-59
AGCGT 737900 0.62006813 6.055767 30-34
AGTAA 541500 0.61061573 6.3033915 50-59
GTCCT 645670 0.6072168 12.049964 8
GACCT 690890 0.60496116 5.2334323 2
TAATA 422360 0.60487986 5.267474 130-139
CACAA 627255 0.6047146 7.4256134 130-139
CTTTG 524890 0.6016465 5.030576 45-49
GGGAT 744720 0.60056233 9.676926 100-109
ACCCC 801785 0.600224 9.437537 140-149
CCCGT 773655 0.5969535 8.731447 140-149
CTATC 535050 0.5950175 5.367104 110-119
GGCCC 974635 0.5921319 7.456832 70-79
GATCA 590670 0.5869336 6.893468 110-119
GGGGA 923880 0.5866295 6.829504 4
TCCAC 639075 0.5831057 5.6624265 180-189
CAAAC 600445 0.57886803 8.033124 130-139
GCTTG 639260 0.57694435 11.230842 90-99
TTACC 517850 0.57588977 7.0688787 45-49
ACATT 452415 0.5709497 6.5700054 110-119
TCAGG 669380 0.5624897 5.0282326 150-159
TATCC 503895 0.56037074 5.50064 170-179
GGGCA 843295 0.557962 8.839074 150-159
GTACT 511565 0.5459583 6.4761424 2
ACCCG 751280 0.53973496 7.700203 140-149
AGTTG 522435 0.5350743 5.5896025 60-69
AACAT 453395 0.5327495 6.3721824 110-119
TGGCC 712755 0.52778465 10.277009 4
CATAA 444975 0.5228558 6.6914806 110-119
GCGAC 758315 0.5228193 5.9019322 70-79
CACTT 464575 0.51664376 5.9476604 3
ATTCT 379525 0.5144175 8.815791 2
AACCT 493085 0.51055515 9.644676 2
GTTTA 392065 0.50998414 5.60066 240-247
AGGCA 650515 0.50896114 5.8591523 80-89
GAGTT 495940 0.5079383 5.2495894 60-69
CACGC 696845 0.5006277 8.730521 190-199
TGACG 578310 0.4859623 7.6159673 220-229
TGATT 371100 0.4827136 5.1906066 50-59
AAGTG 505075 0.48164073 5.166387 120-129
GCCTT 511485 0.48102322 18.074945 3
GGTTT 437035 0.48074254 5.334993 100-109
AAATC 404630 0.4754495 6.3820515 110-119
TAGCT 442405 0.47214854 9.012841 50-59
TTAGC 442275 0.47200972 6.529981 45-49
CGGTT 520700 0.46994174 8.873132 160-169
TGCGC 625575 0.46322906 9.129122 25-29
TTCTT 313775 0.45678115 13.865509 3
CCCTA 488580 0.44579077 6.7397885 110-119
GCTAC 506380 0.4433995 5.61949 50-59
CCGCA 615360 0.44208717 5.391159 220-229
TGGGC 610835 0.43407384 5.245001 1
TACCT 387365 0.4307802 6.8334236 2
GCATG 503950 0.42347652 7.879631 60-69
CGCGG 724680 0.4225187 5.4736023 220-229
GTGTC 458935 0.4141976 5.301715 30-34
CCGGG 709825 0.41385758 5.0466547 80-89
GCGCT 555750 0.41152474 7.9712477 25-29
TAAAT 284155 0.40695053 5.2692432 130-139
CCCTT 414800 0.40648887 6.5734334 3
GACTT 378970 0.4044487 7.771634 3
CCGGT 543550 0.4024907 7.1700706 160-169
ATTGT 309060 0.4020142 7.6141906 240-247
ATGTG 385845 0.3951798 5.401873 140-149
ATCCT 354500 0.39423177 7.966377 2
TTAAT 253275 0.38957682 5.447747 110-119
AGCTT 364860 0.38939005 7.161448 1
CTCTT 323920 0.38689014 5.79354 3
AACTT 302625 0.38191405 9.015438 1
CATGC 431535 0.37786323 6.1219397 60-69
CCTAA 356950 0.36959684 5.959969 110-119
CAGCG 530980 0.36608347 6.0038357 30-34
TAACT 289690 0.36559004 6.5718417 2
CGCCT 470670 0.36316982 5.464485 2
GGTAA 379665 0.3620494 5.525057 120-129
TCCTA 322920 0.35911232 13.91953 9
TTCCT 299200 0.35736457 7.849598 2
CCGCG 574925 0.34929118 5.5520616 220-229
CGTCA 396535 0.34721637 5.7131524 45-49
TTGTG 305345 0.33588234 5.3954453 240-247
AATCT 258230 0.32588738 8.136492 2
TGCTG 353415 0.31896377 9.639287 1
TGCCT 316210 0.29737794 10.059443 2
GTCTT 255920 0.29334408 9.746815 1
CGCTT 286480 0.26941854 5.9251075 1
CGGGG 450180 0.25188896 6.8479886 3
TGTAA 201380 0.24389361 5.674755 25-29
TGCTT 208110 0.23854266 7.4934125 5
TTGCT 114550 0.13130105 5.711356 4