FastQCFastQC Report
Sat 8 Jul 2017
HNCHNBCXY_s2_2_illumina12index_4_SL254631.fastq.gz

Summary

[OK] Basic Statistics

Measure Value
Filename HNCHNBCXY_s2_2_illumina12index_4_SL254631.fastq.gz
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 33401953
Filtered Sequences 0
Sequence length 251
%GC 54

[FAIL] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[WARN] Overrepresented sequences

Sequence Count Percentage Possible Source
GCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 114665 0.34328831011767486 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 81695 0.24458150695559627 No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 76626 0.22940574762200283 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGG 74364 0.22263368851515958 No Hit
TCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 72474 0.21697533674153724 No Hit
GGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 71470 0.2139695244766077 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 71222 0.21322705292112712 No Hit
TTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 67732 0.20277856207988795 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 65832 0.197090271937093 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 64734 0.19380303900194099 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 60922 0.18239053267334399 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 60921 0.18238753883642672 No Hit
AGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 60632 0.18152231996733842 No Hit
TGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 60216 0.18027688380975807 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 60055 0.17979487606607913 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 59906 0.17934879436540732 No Hit
GTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 59824 0.17910329973819195 No Hit
TACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 59537 0.1782440685429382 No Hit
TTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 59348 0.17767823336557598 No Hit
ACCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 58830 0.17612742584243501 No Hit
ATCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 58678 0.1756723626310114 No Hit
GTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 57834 0.17314556427284356 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 57273 0.17146602176226042 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 56953 0.17050799394873706 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 55883 0.16730458844726834 No Hit
GACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 55308 0.16558313221984355 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 54852 0.16421794258557276 No Hit
ATCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 53900 0.16136780984034077 No Hit
AACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 53334 0.15967329814517134 No Hit
ACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 52937 0.15848474488901892 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 51738 0.1548951344252236 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAG 51443 0.15401195253463174 No Hit
CTCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 49718 0.14884758385235736 No Hit
TACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 49257 0.14746742503350027 No Hit
TGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 49255 0.14746143735966577 No Hit
AGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 48686 0.14575794415374455 No Hit
GGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 48470 0.14511127537961627 No Hit
GACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 48116 0.14405145711090606 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 47896 0.14339281298910875 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 47797 0.14309642313429996 No Hit
AACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 46471 0.13912659538201252 No Hit
TCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 45998 0.13771051052014835 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA 45948 0.13756081867428532 No Hit
CGCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 45805 0.13713269999511704 No Hit
CCCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 45704 0.13683032246647375 No Hit
CGCTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 45578 0.1364530990148989 No Hit
CTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 45308 0.13564476304723858 No Hit
GCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCA 43616 0.13057919098323384 No Hit
CACTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 38424 0.11503518970881732 No Hit
CACTTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCA 37786 0.11312512175560513 No Hit
GGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAG 35393 0.10596087001260077 No Hit
CCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCA 34723 0.10395499927803624 No Hit

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
CTGGA 66321760 7.5715804 68.19605 35-39
TATTA 34669690 7.1637106 129.99324 240-247
TGGAT 50859690 7.0531735 82.31375 35-39
TCACC 52856275 6.352963 72.6309 160-169
TCTCC 47968025 6.0112414 88.2412 20-24
TCCCT 47042195 5.8952193 74.17899 10-14
CTGTG 47975050 5.710558 90.529686 25-29
AGTGG 49727855 5.5329366 46.56181 100-109
CTGAG 45393960 5.182372 60.2278 15-19
CCTGA 42892130 5.0243835 61.878845 15-19
TTACT 28177040 4.9973035 97.545166 240-247
TGGGT 42210930 4.896813 46.09883 100-109
CTCCA 40394025 4.855086 43.827984 80-89
CTCTG 39567435 4.832542 82.92871 35-39
GACAC 42561605 4.7817907 54.182453 230-239
GAGAC 43172715 4.727236 84.357735 8
TGTAT 27279710 4.7152586 53.55547 240-247
ATTAC 27631020 4.7000737 101.28379 240-247
ACACG 41332830 4.6437383 57.358315 230-239
AAGGG 43142625 4.6039433 48.45395 90-99
ATTCA 26996680 4.592171 113.059204 40-44
TGAGA 34412975 4.577206 104.6635 15-19
TTCAC 31292045 4.5687146 70.16508 40-44
GGGTC 45478155 4.343212 126.749084 8
GAAGG 40678415 4.3409753 39.304077 90-99
CCAGG 45812360 4.305592 58.18813 80-89
CCCTG 42430455 4.2661405 91.88818 10-14
TCTGG 35625790 4.2406034 142.53998 35-39
TACTG 29365890 4.178579 71.20307 240-247
GACTC 35303785 4.135484 62.35261 20-24
CTGGG 42894755 4.0964947 143.38472 5
TCCAG 34953420 4.0944433 44.432255 80-89
AGACT 29942625 4.086417 79.08254 15-19
ACCAT 28683665 4.016633 64.557106 160-169
TGGAG 36019855 4.0077252 40.411358 90-99
CAGCC 41265035 3.9793036 55.470856 30-34
ACTGG 34681090 3.9593446 46.904736 60-69
GATTC 27725160 3.945114 65.595955 40-44
CAAGA 29887465 3.9120944 47.002136 180-189
CACCA 33921170 3.9103713 55.999073 160-169
TACTA 22835865 3.884411 30.25793 130-139
AGCCT 33149070 3.8830812 52.514687 30-34
AGACA 28921240 3.7856212 35.996197 170-179
ACTAC 26554995 3.7185507 28.0074 130-139
ACTCT 25309880 3.6953034 78.95073 20-24
TCAGT 25701240 3.6571229 53.75726 7
CCTGT 29483890 3.600995 69.116875 25-29
TGAAG 26922210 3.5808733 42.560894 150-159
CACCT 29744850 3.5751276 42.109776 45-49
GCTGG 37062320 3.539491 37.0174 90-99
GGTCC 35961920 3.5239174 135.91107 9
GGATT 24813660 3.441135 63.971245 40-44
ACTGT 24089080 3.4277227 55.480705 240-247
GGCTG 35868830 3.4255118 38.9152 90-99
GGAGT 30590715 3.4036555 38.817 90-99
GAGTG 30534510 3.3974013 45.399254 100-109
GTCCC 33583215 3.3766007 82.112816 10-14
TATCT 18892085 3.3505821 47.533424 200-209
GGACA 30179220 3.304502 26.535465 230-239
TCCTG 26292315 3.2111943 67.38902 25-29
GTATT 18498400 3.1974218 58.91601 240-247
AAGAA 20581295 3.1386342 36.422703 190-199
AGGGA 29178670 3.1137865 44.08027 80-89
CTGCA 26253890 3.0753798 46.00278 25-29
CTCCT 24513400 3.0719626 94.9118 20-24
GTCTC 25001270 3.0535135 34.016068 30-34
CCATC 25366095 3.0488312 37.6229 45-49
CCTCA 25247575 3.034586 45.941925 5
CATCT 20612270 3.0094411 35.841747 170-179
GGAAG 27987490 2.9866707 32.85901 80-89
ATGAA 18572180 2.953 31.701141 210-219
GACAA 21403860 2.80164 30.681103 180-189
ATCTC 19158770 2.7972267 49.516453 170-179
GAACA 21359380 2.7958179 37.09815 210-219
CGCCA 28988515 2.7954445 43.987255 70-79
GGGAA 26023640 2.7770991 36.229618 80-89
CAGGG 30103785 2.757381 40.039345 80-89
GTGAA 20212740 2.6884592 41.05496 150-159
AGTAG 20155940 2.6809044 29.146135 50-59
GAGTC 23243625 2.6535933 29.444939 160-169
CACGG 28131570 2.6438954 50.76942 230-239
CCCTC 25550025 2.6358662 33.415348 20-24
CCGCC 31799030 2.6320312 37.34006 70-79
CCAAG 23341995 2.6224701 40.179493 180-189
TGTGC 21748315 2.588742 58.574684 25-29
GGGGG 34664910 2.588623 111.16878 7
AGAAC 19642850 2.5711343 34.127144 190-199
ACGGC 27354905 2.5709016 53.080338 230-239
CTGTC 20819415 2.5427651 47.26473 30-34
TGAAC 18445365 2.51733 39.36276 210-219
TATAT 12178680 2.51645 29.098015 240-247
TCTGT 16840155 2.4984126 23.69181 210-219
GGGCT 26125625 2.4950254 45.307194 90-99
CACTG 21254445 2.4897454 21.871443 30-34
CAAAT 15062410 2.4573648 38.18171 200-209
CTCTC 19608835 2.4573338 103.11419 20-24
AAATG 15385885 2.4463751 37.847694 200-209
AATGA 15285365 2.4303923 30.496784 210-219
GTGGA 21677125 2.4118907 27.57609 100-109
ATCTG 16921055 2.4077582 35.818672 200-209
ACAAC 17889185 2.4026217 22.643845 180-189
TGCAA 17589675 2.4005497 37.074036 200-209
AGGCT 20917985 2.3880882 23.950066 80-89
TCTAT 13440180 2.3836665 17.78549 110-119
ACCTT 16090865 2.3493054 51.30937 45-49
AGCTG 20560745 2.347304 26.958563 60-69
TCCAA 16762225 2.3472488 42.484207 180-189
CTACT 16037225 2.3414736 22.040705 60-69
GGCCG 28694610 2.2559438 21.358885 230-239
GTGGG 24158595 2.2485642 33.13251 100-109
AGGGC 24528785 2.246734 31.803125 150-159
CAGGC 23785765 2.2354624 32.326702 70-79
TGCAG 19577780 2.2350848 49.533604 30-34
CTACA 15869050 2.2221758 14.916585 140-149
CAGTG 19460465 2.2216914 43.270683 8
CTATG 15515545 2.2077632 20.124916 50-59
GTGTA 15905385 2.2057438 25.846365 240-247
AGAGA 17283445 2.204834 33.49119 170-179
TGGGG 23650720 2.2012937 136.64583 6
CTCAC 18273380 2.1963353 57.92389 20-24
GCTCC 21805260 2.1923945 36.088634 80-89
GTATC 15364460 2.1862648 23.07515 200-209
ACAGC 19375650 2.1768517 27.930859 210-219
GCAGC 23154540 2.176138 39.287148 30-34
CTATT 12154945 2.155725 17.281246 240-247
GCCTC 21262320 2.137805 47.625355 30-34
GGCTC 21787520 2.1349645 20.859127 80-89
CCTCT 16984340 2.1284382 52.605034 35-39
TCCGC 21060535 2.1175168 44.983654 70-79
GAGCT 18530490 2.1155214 23.947489 60-69
CAGAG 19280100 2.1110923 37.617096 170-179
TGTGA 15215065 2.1100109 18.80892 210-219
CAGAC 18748395 2.1063797 27.129545 140-149
CCAGA 18744760 2.1059713 38.620026 170-179
TCTCT 13825500 2.104619 38.891586 35-39
GTAGT 15154410 2.1015992 22.418707 120-129
GCCAG 22266195 2.0926487 39.121952 70-79
GCAGA 19105790 2.0920062 25.272135 140-149
CTTCA 14322310 2.0910919 47.746243 45-49
TGGTG 18004600 2.0886805 31.86754 35-39
GCTGT 17531555 2.086813 20.09598 230-239
GCCTG 21151205 2.0726118 27.670347 210-219
CAGTA 15182060 2.0719705 22.625238 50-59
AACAG 15728510 2.05877 35.23179 210-219
GCCGA 21608490 2.0308352 20.483526 220-229
TGTCT 13611060 2.0193427 46.035095 30-34
CATAT 11850875 2.0158498 14.99717 170-179
ATCAG 14585155 1.9905078 24.929243 45-49
CCTTC 15832675 1.984114 51.043045 45-49
GGGGC 25451835 1.9501698 33.593437 90-99
ACTAT 11448845 1.947464 15.2775755 50-59
ACCTG 16579255 1.9420937 36.95957 25-29
AGGGG 21584305 1.9268107 39.136284 90-99
TTCAG 13493110 1.9199836 45.595974 45-49
ATATC 11270785 1.9171758 15.672023 170-179
TGACC 16287320 1.9078965 14.731115 210-219
TCCAT 13042450 1.9042292 31.864784 45-49
CTGTA 13331000 1.8969163 23.170383 190-199
ATGGA 14234725 1.8933344 13.739556 120-129
TTATT 8782900 1.8921632 32.0077 240-247
AGAGT 14164665 1.8840157 25.450163 150-159
TACAA 11505665 1.8770977 18.360823 140-149
TAGTA 11220035 1.8600619 16.637844 120-129
TGCAC 15868785 1.8588693 24.041931 25-29
ATTGG 13373085 1.8545666 19.979872 100-109
ACCCT 15256580 1.8337367 41.50135 10-14
TGGGA 16429880 1.8280596 13.595042 120-129
AGGAC 16434600 1.7995216 20.654602 230-239
ACAAT 10993495 1.7935395 25.938534 180-189
ATACT 10516775 1.7889174 26.178831 130-139
TATGC 12426515 1.7682139 13.673887 50-59
GGTCT 14816140 1.7635925 24.45204 15-19
GGATC 15258715 1.7420015 20.54866 70-79
GTCCG 17765450 1.7408409 38.933964 70-79
TAGTG 12545200 1.7397565 25.3931 120-129
GTGCA 15216800 1.7372164 54.38365 25-29
GTGGT 14962345 1.7357543 25.04395 120-129
GGTGG 18633370 1.7343034 19.830675 40-44
GAGGA 16230235 1.732001 26.095833 220-229
CCTGC 17176200 1.726969 38.10217 20-24
CTGAA 12641235 1.7252115 21.9277 200-209
AACTA 10528085 1.71761 26.100178 130-139
GATGG 15372435 1.7104037 17.591179 100-109
GCAAA 12997615 1.7013118 34.098755 200-209
ATATT 8230420 1.7006309 30.843737 240-247
GTCAC 14435210 1.6909404 32.704407 160-169
TTCCA 11516165 1.6813879 22.196701 180-189
CAGTT 11769920 1.6747845 23.24756 190-199
ATTAT 8104460 1.674604 15.03939 240-247
GGGCC 21258125 1.6712941 21.517744 150-159
CGATT 11699395 1.6647493 36.409695 160-169
CCTGG 16904910 1.6565163 49.801735 4
AACAC 12195230 1.6378905 23.09121 190-199
TACAT 9612060 1.6350244 11.185991 190-199
GGGGT 17511935 1.6299254 134.52756 9
CCGTG 16628780 1.6294583 18.093655 150-159
TCTGC 13312235 1.6258808 33.077736 200-209
AGTCA 11872690 1.6203245 27.86952 160-169
CATGA 11682065 1.594309 23.105637 60-69
CGTCC 15812790 1.5898857 18.843653 180-189
ACCAG 14096360 1.5837244 14.649129 190-199
TCTCA 10769400 1.5723584 25.820093 100-109
CTCAG 13404675 1.5702235 44.45753 6
TCCGT 12828320 1.5667782 15.352654 150-159
ATGCA 11479205 1.5666237 16.341288 60-69
TATCA 9139915 1.5547117 13.9274435 170-179
AGTTC 10870450 1.5467958 19.841925 190-199
TTTAT 7172140 1.5451456 16.00518 240-247
TGAGC 13482080 1.5391731 12.902615 60-69
GTGAC 13466420 1.5373853 14.798148 210-219
TTCTG 10354155 1.5361469 27.328722 30-34
GAACT 11211270 1.5300572 15.070417 190-199
TTCTC 10045420 1.5291874 19.96725 190-199
GGATG 13620110 1.5154325 18.925564 100-109
CAATT 8902245 1.5142839 24.477386 180-189
CTCCC 14669330 1.5133604 11.552671 200-209
ACTCC 12571295 1.5109837 18.346481 140-149
GCACT 12892730 1.510254 22.90985 25-29
AGCAC 13394655 1.5048877 18.756723 130-139
AGTGA 11301435 1.503183 50.17193 9
CATCA 10640450 1.4900041 30.494911 45-49
GAGAG 13933845 1.4869429 28.434385 220-229
CTCAA 10589405 1.4828562 20.737007 150-159
GTTCT 9993060 1.4825747 19.829464 190-199
CTGGT 12430185 1.4795877 31.434526 35-39
TGGAA 11092570 1.4754022 20.20508 120-129
TCAGC 12579100 1.4735156 9.313572 45-49
AATTC 8561545 1.4563305 24.313011 180-189
AAGAG 11320760 1.4441798 18.89659 150-159
TTAGT 8302420 1.4350613 22.772795 110-119
ATCCG 12246475 1.434552 23.905552 70-79
TGTCC 11715440 1.4308574 57.98527 15-19
GCTAT 10051930 1.4303255 19.345987 50-59
CAAGG 13047610 1.4286602 13.374938 25-29
AGACC 12691925 1.4259361 89.777824 9
GGACT 12437550 1.419925 15.34815 90-99
GTCCA 12015525 1.4074985 27.322063 180-189
TCTGA 9875235 1.4051831 14.779271 220-229
CTTTA 7885695 1.3985575 38.312763 45-49
GCTGA 12246105 1.3980687 17.541805 200-209
CGGCT 14259595 1.3973011 26.017157 230-239
CCATA 9941090 1.3920711 13.43028 160-169
CGGCC 17245495 1.3911636 28.23403 230-239
CACAG 12302020 1.3821304 10.603727 140-149
TGGTA 9918575 1.3754985 21.8059 120-129
TCAAG 10045080 1.3709015 23.143627 150-159
TCACT 9382200 1.3698238 15.220704 190-199
AGTCG 11947140 1.3639376 15.543496 150-159
CAACT 9734995 1.3632114 14.129353 130-139
ATCTA 7978065 1.3570795 17.824646 110-119
CACGT 11564840 1.3547052 18.574009 180-189
CCATG 11531420 1.3507903 12.567294 60-69
GTGGC 14071400 1.3438338 16.021769 40-44
GGAGC 14658010 1.3426125 9.18896 60-69
AGTTA 8065235 1.3370578 17.374683 50-59
ATACA 8187060 1.335682 16.36431 35-39
GTCGA 11679910 1.3334296 13.093869 160-169
GCCGT 13586935 1.3313872 24.167568 230-239
CAACC 11436960 1.3184321 16.50738 140-149
TGTGT 9099555 1.3157203 18.799763 240-247
ACATA 8061320 1.3151683 20.598087 130-139
GATTG 9472415 1.3136256 23.560284 100-109
AGAGC 11987590 1.3125921 24.632133 220-229
CGACA 11660235 1.3100259 11.854083 70-79
CCGAT 11123325 1.3029861 27.243097 160-169
GCACA 11564170 1.299233 12.847243 130-139
CTTCG 10597220 1.2942843 106.32777 5
GGAGA 12062880 1.2872839 91.65205 9
TCGGA 11181715 1.2765533 98.84819 7
TACGC 10802310 1.2653825 23.14875 140-149
TTATA 6112675 1.2630466 13.819295 110-119
TTGGG 10799485 1.2528284 12.757144 100-109
AACCA 9318320 1.2515047 19.330492 190-199
TTCGG 10466520 1.2458493 103.14792 6
GTTAC 8741950 1.2439238 13.560741 50-59
AACCC 10782615 1.2430004 19.23063 140-149
ACGTC 10595380 1.2411425 20.474953 180-189
GACCC 12841825 1.2383734 46.81471 10-14
GATCC 10553795 1.2362714 23.818268 70-79
TCGAG 10770595 1.229618 12.708973 160-169
ACAGT 8947990 1.2211761 11.111243 120-129
GGCAG 13226270 1.2114711 9.610647 70-79
ATTCC 8192135 1.1960715 22.010912 180-189
TGGAC 10471790 1.1955053 10.543537 80-89
GGCCT 12178155 1.1933404 38.61626 3
CGCAG 12578160 1.1821359 16.01419 140-149
CCGTC 11730095 1.1793941 10.063968 140-149
TTACA 6890355 1.1720586 7.747793 120-129
CCAGT 9954275 1.1660435 16.898989 190-199
GCCAA 10292605 1.1563729 16.513233 180-189
ACACA 8597020 1.15463 7.2704964 130-139
CCTTT 7530320 1.1463206 41.986423 45-49
CTACG 9747300 1.1417986 14.166684 140-149
TATTT 5286175 1.1388386 13.925667 240-247
GAGCA 10399905 1.1387471 7.6149445 130-139
ACCGC 11681440 1.1264743 15.556783 220-229
AACTG 8208325 1.1202304 15.01218 60-69
GGCTT 9336380 1.1113266 12.434677 25-29
GGGAC 12092890 1.1076581 12.305638 90-99
CGCTG 11302740 1.1075584 9.956009 190-199
AGCTA 8092490 1.1044219 18.108078 50-59
GAGCC 11714405 1.1009573 18.869677 220-229
CTCCG 10940095 1.0999643 11.043586 150-159
GAAGT 8267300 1.0996182 8.808677 120-129
ACATG 8053880 1.0991526 9.427423 190-199
GGGTG 11799220 1.0982138 11.507372 100-109
AGCAG 10021495 1.0973128 11.882305 50-59
CCTAC 9128110 1.0971364 11.806176 190-199
ATTAG 6609700 1.0957587 23.286005 110-119
TTTCA 6156910 1.091951 8.319787 100-109
ATATA 5480230 1.086061 12.1623125 130-139
TGGCT 9119890 1.0855573 29.976364 40-44
TAGAC 7937735 1.0833018 15.401135 170-179
CTATA 6368240 1.0832461 10.693999 50-59
AAGCT 7934810 1.0829026 12.337939 200-209
GAACC 9633075 1.0822747 11.48819 190-199
ACTCA 7705495 1.0790163 13.693564 190-199
ACAGA 8241160 1.0787196 14.584657 140-149
TAGCA 7852650 1.0716898 9.362412 50-59
GTCTG 8998155 1.071067 16.999254 3
CGTGA 9373215 1.070087 21.708027 150-159
CGAGG 11621805 1.0645088 16.403078 220-229
GGGAG 11876485 1.060203 10.006753 5
TAGTT 6130705 1.0596836 16.349857 50-59
ACACC 9169820 1.0570803 12.035703 40-44
GTATA 6359100 1.0542141 11.542572 240-247
CGAGT 9158655 1.0455921 17.70687 160-169
AACTC 7432380 1.0407715 16.40608 190-199
CTTCT 6833200 1.0401998 17.116728 30-34
AGCCC 10736205 1.0353225 15.025511 80-89
AGCCG 10985260 1.0324298 19.904331 220-229
GCCCC 12471515 1.0322773 13.901823 80-89
ATGAG 7658930 1.0187001 17.989166 60-69
GACTG 8839850 1.0091957 14.474785 90-99
TGAGT 7267790 1.0078902 14.367453 90-99
CAGCT 8588680 1.0060778 8.152034 50-59
CGGAG 10914820 0.99975187 79.20484 8
CACAT 7136750 0.99937385 12.903914 130-139
GCAAG 9119570 0.9985557 14.647331 25-29
ATCAA 6110950 0.9969742 11.045643 110-119
ACCAA 7414570 0.99582005 15.225458 130-139
ATGAC 7289950 0.9948954 7.2028894 160-169
CCGAG 10429690 0.98021585 18.250378 220-229
ACGCA 8709165 0.97847354 19.485645 140-149
GTGCG 10243000 0.97821754 11.942796 240-247
TATAC 5728750 0.9744681 9.29987 130-139
CCAAC 8431505 0.9719686 11.535529 130-139
GTCTA 6816125 0.9698912 7.485364 240-247
ATAGT 5834815 0.96729785 15.814993 120-129
TACCA 6864205 0.96120876 9.012928 130-139
GTTTC 6474605 0.96057516 5.505624 100-109
GATGA 7219530 0.96025634 8.22774 60-69
TTTAG 5537435 0.95713764 30.34044 45-49
TATTG 5526820 0.9553029 11.032004 240-247
GCAGT 8356075 0.953966 7.1573677 50-59
CCCCA 9624665 0.9523247 17.392006 80-89
CCCAG 9868095 0.95160806 14.913411 80-89
AAGGC 8688895 0.9513986 19.458027 25-29
AGTCT 6677865 0.95021766 12.531049 8
ATGGG 8497260 0.94544196 15.094765 100-109
AGGCC 10017350 0.9414626 9.441072 70-79
TGAGG 8441485 0.93923616 7.947164 220-229
TACAG 6874805 0.93823844 5.576424 120-129
GTAGA 7004550 0.93166226 14.187271 170-179
TGCGA 8131750 0.92835605 9.2480345 240-247
GCTTC 7582855 0.9261269 22.76416 2
GACAG 8428975 0.9229384 11.428303 70-79
CTGAC 7878230 0.9228556 8.768791 220-229
GCTCT 7525780 0.91915596 12.823785 210-219
TTTCT 4941675 0.91379154 9.202585 4
GAAGC 8312475 0.91018206 10.171306 200-209
GCCAT 7768375 0.9099874 7.374449 60-69
AGCTC 7751380 0.9079964 10.779152 210-219
CAGCA 7994030 0.8981282 7.7175307 45-49
CATAC 6407615 0.8972715 13.118603 130-139
AATAC 5482625 0.89446574 12.507412 130-139
CGTGT 7480125 0.89037293 15.713982 230-239
ATGAT 5366645 0.88968456 8.488323 120-129
GATAC 6498790 0.8869219 19.053183 35-39
GACCG 9434420 0.88667697 10.695709 220-229
CGTAT 6224530 0.8857109 7.870968 110-119
ACAAG 6744955 0.8828752 11.570278 80-89
CCCCT 8454210 0.87217784 8.453176 140-149
ATTTA 4183125 0.86434853 8.396678 110-119
CATTA 5064870 0.86154115 12.669665 110-119
CGTCT 7008995 0.85603875 7.350029 35-39
ATCAT 5006235 0.8515673 8.486406 110-119
TTGGA 6132750 0.85048395 8.337415 60-69
ATGGT 6131620 0.85032725 8.139383 120-129
TACAC 6071755 0.85024035 15.181711 35-39
TTATG 4897295 0.8464904 10.57466 50-59
GGTTC 7109990 0.8463152 10.206412 160-169
AATCA 5183800 0.8457138 10.722775 110-119
GCACC 8769055 0.8456247 10.708696 130-139
AAAAA 4636980 0.84532857 5.8216286 190-199
CCTCC 8144415 0.84021795 9.608521 140-149
TATGG 6056225 0.83987147 10.033863 35-39
CGCCG 10391870 0.83829385 12.0690365 220-229
TTGAG 5984600 0.82993865 13.919338 90-99
AGGTC 7261995 0.8290609 14.402447 15-19
GAAAT 5205165 0.8276277 6.3873777 110-119
TGGCA 7198605 0.8218242 5.9296737 100-109
TCTTC 5385720 0.8198538 33.43184 4
GTAGC 7156150 0.8169773 9.391959 50-59
TGATG 5874455 0.8146638 13.469129 120-129
CGGAC 8666450 0.81450075 11.597501 220-229
GATCT 5688130 0.8093847 6.697869 2
TCATA 4754355 0.80872214 6.756543 120-129
ATTTC 4558410 0.80845106 7.2324314 240-247
CTTGA 5641490 0.80274814 14.726166 90-99
GTTCA 5628630 0.8009182 12.06174 160-169
ATAAA 4192035 0.79679704 9.259695 110-119
AAACT 4872750 0.79496735 10.289875 130-139
CAACG 7056210 0.79276425 16.166626 180-189
GTTAT 4575285 0.79083145 8.292127 50-59
ACTTC 5378885 0.7853302 31.467422 4
TCAAT 4566880 0.77683246 7.5200434 110-119
TATAG 4681345 0.77607524 7.9832025 120-129
AAATA 4079830 0.7754699 13.903121 130-139
CAGTC 6618605 0.7753032 5.9967465 210-219
ACGCC 7998910 0.7713574 13.885704 180-189
TTCAT 4324435 0.76695484 5.284517 40-44
ACAAA 4901455 0.76695096 11.442896 130-139
AACGC 6824950 0.7667822 15.366053 180-189
GGTAT 5525190 0.76622814 9.393424 110-119
TACTT 4291425 0.7611003 11.617318 3
CCCCC 8911120 0.7568051 13.500952 80-89
TGGTT 5172375 0.74788266 8.114892 35-39
ACAGG 6822770 0.7470655 10.942292 70-79
TAACA 4574400 0.7462928 6.2191014 120-129
AAGGT 5610315 0.7462176 16.99697 15-19
GCCGC 9140255 0.7373283 12.276965 220-229
TCCGG 7510695 0.7359749 12.043506 70-79
TGACT 5161550 0.7344557 6.0336413 40-44
ACGCT 6259815 0.7332746 12.118428 190-199
TCCTT 4805595 0.7315429 10.604942 3
CAGAA 5577440 0.73005426 11.762009 140-149
AGTAC 5346805 0.72970486 5.4859033 130-139
AGATC 5332995 0.72782004 6.9475455 210-219
AGAAG 5620790 0.71703935 9.672286 140-149
AATTA 3607650 0.71495694 6.3185663 50-59
TCATC 4888495 0.71373206 5.918337 110-119
AAGTT 4283040 0.7100441 11.02672 140-149
ACACT 5057295 0.7081834 6.5542364 2
ATGCC 6043560 0.70794255 7.528217 50-59
AATGG 5313810 0.70678 6.485156 120-129
TCAAC 5045440 0.70652336 5.677724 110-119
TGCCA 6028010 0.706121 6.9827456 60-69
GAAGA 5533960 0.7059625 5.776461 15-19
AGATG 5307525 0.705944 6.9867964 120-129
TTTAC 3975350 0.7050432 10.585523 45-49
ACGAC 6259720 0.7032787 9.424224 220-229
TGTTT 3896570 0.7022323 5.7388983 240-247
AGTAT 4218700 0.6993778 7.711301 110-119
GGTAG 6278900 0.69861764 9.397863 120-129
GCGGA 7623105 0.69824445 10.014123 220-229
TTCAA 4075060 0.6931732 5.00097 200-209
GCCTA 5894345 0.6904635 11.671094 190-199
GAGAT 5174385 0.68823534 6.7525506 210-219
GACGA 6257720 0.68519485 11.514753 220-229
CATGG 5950195 0.67930025 6.955772 200-209
GGATA 5100045 0.6783475 14.906222 35-39
AGTAA 4256100 0.67672527 7.2834563 50-59
TAATA 3370490 0.66795695 6.846386 130-139
ACCTA 4768875 0.6677954 7.790742 130-139
CCGTA 5690900 0.66663194 6.340015 230-239
ATCTT 3752655 0.66554743 12.379688 3
TATGT 3845825 0.66474533 8.230292 140-149
GGTGC 6893975 0.658382 7.767189 60-69
CACCG 6746940 0.6506264 8.591605 45-49
GACCA 5765030 0.64770037 5.1896386 170-179
CTGCG 6596225 0.64636564 14.715458 25-29
CCAGC 6684150 0.6445714 6.446984 80-89
CCCGT 6405825 0.6440692 9.346699 140-149
CGGCA 6813275 0.64033335 11.254084 70-79
GACCT 5439915 0.63723147 5.236279 2
ATTAA 3191900 0.63256437 8.990948 110-119
GGTTA 4531950 0.6284865 6.0949206 50-59
CCGGC 7713555 0.6222389 9.670863 70-79
CTATC 4254175 0.6211198 5.863784 110-119
GGTGA 5549125 0.61741966 6.266928 120-129
ATCCA 4385935 0.6141715 5.198324 180-189
GGGAT 5445495 0.6058894 9.939296 100-109
ACATT 3495875 0.59465307 6.9292665 110-119
CTGTT 3991845 0.59223175 5.3394136 240-247
TATCC 4028115 0.5881145 6.3236384 170-179
GGGTT 5052945 0.58618283 6.4864383 100-109
ACCCG 6076920 0.5860145 8.436073 140-149
CACAA 4362995 0.5859757 7.5771475 130-139
AACAT 3582375 0.58444846 7.572054 110-119
GATCA 4273335 0.5832031 7.414233 110-119
AAGAT 3579505 0.5691458 6.6818905 120-129
TTACC 3894470 0.568602 7.437577 45-49
AGGCA 5162255 0.56524587 7.1294975 80-89
AGTTG 4046455 0.56115854 5.8635173 60-69
GCTTG 4684135 0.55756116 10.639619 90-99
CACGC 5770970 0.556511 9.798248 190-199
TCAGG 4852585 0.5539923 5.261814 150-159
GTTTA 3203175 0.5536642 6.5435762 240-247
GGGCA 6007035 0.5502193 9.082783 150-159
GTACT 3851110 0.5479884 6.6674705 2
TGGCC 5563520 0.5451707 9.23814 4
TGTGG 4660100 0.54060966 5.1861444 140-149
CATAA 3294495 0.53748214 7.7281675 110-119
CACTT 3676150 0.53672683 6.1168327 3
AATAA 2802590 0.5326997 6.078562 130-139
GGGGA 5919490 0.5284274 8.166698 4
ACTTT 2950490 0.52328044 5.985845 45-49
CGGTT 4383945 0.521829 10.197944 160-169
GCGAC 5508385 0.51769567 5.9264617 70-79
ATTCT 2907675 0.51568705 9.920658 2
GTCCT 4209985 0.5141837 7.190794 2
TGATT 2971245 0.51357543 5.3545156 50-59
GAGTT 3692920 0.51213056 5.3953533 60-69
GGCCC 6334910 0.511026 7.2598 70-79
TGACG 4471985 0.5105413 7.8646994 220-229
GAGTA 3820400 0.5081443 5.8553257 110-119
TTAGC 3553755 0.5056767 7.1245193 45-49
ACCCC 5044165 0.49910134 8.370268 140-149
GGTTT 3429750 0.49591348 5.7597685 100-109
TAGCT 3432725 0.4884549 9.889688 50-59
AAGTG 3665360 0.48752275 6.2339168 120-129
AAATC 2966735 0.48400953 6.9460893 110-119
GGCAA 4332915 0.47443652 5.2650094 80-89
CAATC 3381675 0.4735429 5.0629187 110-119
TGCGC 4825275 0.4728299 9.301437 25-29
CAAAC 3517790 0.4724597 8.176397 130-139
CTTTG 3139725 0.46581095 5.1706433 45-49
GCCTT 3784205 0.46218133 15.905623 3
CCGCA 4779590 0.4609094 5.5670123 220-229
GTGAT 3246050 0.45015913 5.231762 120-129
TACCT 3079520 0.44961736 5.9296875 2
CCGGT 4475270 0.43853283 8.226188 160-169
GCATG 3840600 0.4384596 8.825224 60-69
TCCAC 3623485 0.43551815 5.4062366 180-189
ATTGT 2476895 0.42812774 8.818661 240-247
GCTAC 3637965 0.42615113 5.5202465 50-59
CGCGG 5419150 0.42604858 5.678172 220-229
AACCT 3038115 0.4254335 7.8966246 2
TTCTT 2269455 0.41965705 12.2672205 3
GGTCA 3647550 0.41642022 5.3765283 160-169
GACTT 2914725 0.4147468 6.957398 1
TAAAT 2091390 0.41446748 6.4676504 130-139
CCCTA 3425950 0.4117757 6.260583 110-119
TTAAT 1973340 0.40774626 5.9526386 110-119
GTGTC 3401245 0.40485647 5.475456 30-34
CCGGG 5131885 0.40346408 5.514454 80-89
CATGC 3428135 0.4015717 7.068609 60-69
GCGCT 4048735 0.3967365 8.037401 25-29
GCGTC 3953115 0.38736668 6.162575 30-34
AGCTT 2717110 0.38662744 7.5875087 1
CGTCA 3265570 0.38252878 5.9111266 45-49
ATCCT 2619060 0.38238907 8.886328 2
CAGCG 4042565 0.37993318 7.076356 30-34
CGCCT 3747750 0.37681493 5.0471916 2
AACTT 2198965 0.37404692 10.496768 3
ATGTG 2664595 0.3695235 6.0200653 140-149
CTCTT 2350560 0.35781947 6.523501 1
CCTAA 2530945 0.35441345 5.9532747 110-119
CGGGA 3846595 0.352332 5.0901513 80-89
CCGCG 4274045 0.3447797 5.634717 220-229
CTTTC 2194940 0.33412987 5.211872 45-49
AATCT 1963460 0.3339872 8.884821 2
GGTAA 2488035 0.33092892 5.6295257 120-129
TAACT 1904930 0.3240311 6.0608683 4
AGCGT 2811105 0.320928 6.9049907 30-34
TAAAG 1999915 0.317989 5.2008333 110-119
TTGTG 2179060 0.31507406 6.2391043 240-247
TTCCT 2069650 0.3150573 7.467729 2
TGCTG 2645995 0.31495768 10.258054 1
ATGCT 2109560 0.30017695 5.1610737 2
GTCTT 1982580 0.2941364 8.830519 1
CCCTT 2274970 0.28509396 5.2681875 3
TGCCT 2014100 0.24599075 8.3842325 2
CGGGG 3079610 0.23596577 8.0017605 3
TGTAA 1412655 0.23419051 6.8197203 25-29
TGCTT 1467005 0.21764548 8.112902 5
TTGCT 795625 0.118039265 6.1185226 4